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Bringing comments up to data and formatting for document extraction.
Added package "flt". o pkg/flt o verification/flt_example o visualization of trajectories supplied o works but output not available to testscript
o Added grdchk package handling o Added passive tracer handling
Merge from branch pre38: o essential mods for cubed sphere o debugged atmosphere, dynamcis + physics (aim) o new packages (mom_vecinv, mom_fluxform, ...)
AIM (Atmosphere Intermediate Physics) define as a standard package
Merged changes from branch "branch-atmos-merge" into MAIN (checkpoint34) - substantial modifications to algorithm sequence (dynamics.F) - packaged OBCS, Shapiro filter, Zonal filter, Atmospheric Physics
Package structure rearranged to comply with standard. Includes useKPP, useGMRedi. Tested for exp(0,2,4).
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