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separate the state variable "eta" from the 2D solver solution cg2d_x
apply shap_filter to U,V when Crank-Nickelson time step is used
use "zonal_filt_lat < 90." as a running flag for zonal FFT filter
move the IO at the end of a time step
Made sure each .F and .h file had the CVS keywords Header and Name at its start. Most had header but very few currently have Name, so lots of changes!
Merged changes from branch "branch-atmos-merge" into MAIN (checkpoint34) - substantial modifications to algorithm sequence (dynamics.F) - packaged OBCS, Shapiro filter, Zonal filter, Atmospheric Physics
Rescaling of forcing fields done immediately after reading fields.
Change call to load_external_fields -> external_fields_load Tested for exp(0,2,4).
Moved the writing of time-averages to do_the_model_io().
Restructered the calling tree between THE_MODEL_MAIN() and DYNAMICS(). Two calling levels have been inserted to better split the "fixed" initialization phase from the main time-loop for easier connectivity with the adjoint infrastructure. The calling tree now looks like: the_model_main: initialise_fixed() the_main_loop() the_main_loop: initialise_varia() do i=1,nIters forward_step() enddo forward_step() forward_step: load_external_fields() dynamics() do_the_model_io() solve_for_pressure() do_gterm_blocking_exchanges() write_checkpoint()
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