/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.259 by dimitri, Fri Mar 2 01:45:22 2012 UTC revision 1.286 by jmc, Tue Apr 4 23:19:33 2017 UTC
# Line 14  C     here. Notes describing the paramet Line 14  C     here. Notes describing the paramet
14    
15  CEOP  CEOP
16    
 C     Macros for special grid options  
 #include "PARAMS_MACROS.h"  
   
17  C--   Contants  C--   Contants
18  C     Useful physical values  C     Useful physical values
19        Real*8 PI        Real*8 PI
# Line 36  C                        (+ 4 digits Pro Line 33  C                        (+ 4 digits Pro
33  C     adTapeDir       :: read-write checkpointing tape files from/to this  C     adTapeDir       :: read-write checkpointing tape files from/to this
34  C                        directory name instead of current dir. Conflicts  C                        directory name instead of current dir. Conflicts
35  C                        mdsioLocalDir, so only one of the two can be set.  C                        mdsioLocalDir, so only one of the two can be set.
 C                        In contrast to mdsioLocalDir, if specified adTapeDir  
 C                        must exist before the model starts.  
36  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)
37  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)
38  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)
39    C     gravityFile   :: File containing gravity vertical profile (1.D)
40  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)
41  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)
42  C     hybSigmFile   :: File containing hybrid-sigma vertical coord. coeff. (2x 1.D)  C     hybSigmFile   :: File containing hybrid-sigma vertical coord. coeff. (2x 1.D)
# Line 52  C     bathyFile       :: File containing Line 48  C     bathyFile       :: File containing
48  C                        is taken from inline function.  C                        is taken from inline function.
49  C     topoFile        :: File containing the topography of the surface (unit=m)  C     topoFile        :: File containing the topography of the surface (unit=m)
50  C                        (mainly used for the atmosphere = ground height).  C                        (mainly used for the atmosphere = ground height).
51    C     addWwallFile    :: File containing 2-D additional Western  cell-edge wall
52    C     addSwallFile    :: File containing 2-D additional Southern cell-edge wall
53    C                        (e.g., to add "thin-wall" where it is =1)
54  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)
55  C                        for potential temperature.  C                        for potential temperature.
56  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)
# Line 64  C     viscA4Zfile     :: File containing Line 63  C     viscA4Zfile     :: File containing
63  C     zonalWindFile   :: File containing zonal wind data  C     zonalWindFile   :: File containing zonal wind data
64  C     meridWindFile   :: File containing meridional wind data  C     meridWindFile   :: File containing meridional wind data
65  C     thetaClimFile   :: File containing surface theta climataology used  C     thetaClimFile   :: File containing surface theta climataology used
66  C                       in relaxation term -lambda(theta-theta*)  C                        in relaxation term -lambda(theta-theta*)
67  C     saltClimFile    :: File containing surface salt climataology used  C     saltClimFile    :: File containing surface salt climataology used
68  C                       in relaxation term -lambda(salt-salt*)  C                        in relaxation term -lambda(salt-salt*)
69  C     surfQfile       :: File containing surface heat flux, excluding SW  C     surfQfile       :: File containing surface heat flux, excluding SW
70  C                        (old version, kept for backward compatibility)  C                        (old version, kept for backward compatibility)
71  C     surfQnetFile    :: File containing surface net heat flux  C     surfQnetFile    :: File containing surface net heat flux
72  C     surfQswFile     :: File containing surface shortwave radiation  C     surfQswFile     :: File containing surface shortwave radiation
 C     dQdTfile        :: File containing thermal relaxation coefficient  
73  C     EmPmRfile       :: File containing surface fresh water flux  C     EmPmRfile       :: File containing surface fresh water flux
74  C           NOTE: for backward compatibility EmPmRfile is specified in  C           NOTE: for backward compatibility EmPmRfile is specified in
75  C                 m/s when using external_fields_load.F.  It is converted  C                 m/s when using external_fields_load.F.  It is converted
76  C                 to kg/m2/s by multiplying by rhoConstFresh.  C                 to kg/m2/s by multiplying by rhoConstFresh.
77  C     saltFluxFile    :: File containing surface salt flux  C     saltFluxFile    :: File containing surface salt flux
78  C     pLoadFile       :: File containing pressure loading  C     pLoadFile       :: File containing pressure loading
79    C     addMassFile     :: File containing source/sink of fluid in the interior
80  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data
81  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data
82  C     the_run_name    :: string identifying the name of the model "run"  C     the_run_name    :: string identifying the name of the model "run"
83        COMMON /PARM_C/        COMMON /PARM_C/
84       &                buoyancyRelation, eosType,       &                buoyancyRelation, eosType,
85       &                pickupSuff, mdsioLocalDir, adTapeDir,       &                pickupSuff, mdsioLocalDir, adTapeDir,
86       &                tRefFile, sRefFile, rhoRefFile,       &                tRefFile, sRefFile, rhoRefFile, gravityFile,
87       &                delRFile, delRcFile, hybSigmFile,       &                delRFile, delRcFile, hybSigmFile,
88       &                delXFile, delYFile, horizGridFile,       &                delXFile, delYFile, horizGridFile,
89       &                bathyFile, topoFile,       &                bathyFile, topoFile, addWwallFile, addSwallFile,
90       &                viscAhDfile, viscAhZfile,       &                viscAhDfile, viscAhZfile,
91       &                viscA4Dfile, viscA4Zfile,       &                viscA4Dfile, viscA4Zfile,
92       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,
# Line 97  C     the_run_name    :: string identify Line 96  C     the_run_name    :: string identify
96       &                surfQfile, surfQnetFile, surfQswFile,       &                surfQfile, surfQnetFile, surfQswFile,
97       &                lambdaThetaFile, lambdaSaltFile,       &                lambdaThetaFile, lambdaSaltFile,
98       &                uVelInitFile, vVelInitFile, pSurfInitFile,       &                uVelInitFile, vVelInitFile, pSurfInitFile,
99       &                dQdTfile, ploadFile,       &                pLoadFile, addMassFile,
100       &                eddyPsiXFile, eddyPsiYFile,       &                eddyPsiXFile, eddyPsiYFile, geothermalFile,
101       &                the_run_name       &                the_run_name
102        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation
103        CHARACTER*(6)  eosType        CHARACTER*(6)  eosType
# Line 108  C     the_run_name    :: string identify Line 107  C     the_run_name    :: string identify
107        CHARACTER*(MAX_LEN_FNAM) tRefFile        CHARACTER*(MAX_LEN_FNAM) tRefFile
108        CHARACTER*(MAX_LEN_FNAM) sRefFile        CHARACTER*(MAX_LEN_FNAM) sRefFile
109        CHARACTER*(MAX_LEN_FNAM) rhoRefFile        CHARACTER*(MAX_LEN_FNAM) rhoRefFile
110          CHARACTER*(MAX_LEN_FNAM) gravityFile
111        CHARACTER*(MAX_LEN_FNAM) delRFile        CHARACTER*(MAX_LEN_FNAM) delRFile
112        CHARACTER*(MAX_LEN_FNAM) delRcFile        CHARACTER*(MAX_LEN_FNAM) delRcFile
113        CHARACTER*(MAX_LEN_FNAM) hybSigmFile        CHARACTER*(MAX_LEN_FNAM) hybSigmFile
# Line 115  C     the_run_name    :: string identify Line 115  C     the_run_name    :: string identify
115        CHARACTER*(MAX_LEN_FNAM) delYFile        CHARACTER*(MAX_LEN_FNAM) delYFile
116        CHARACTER*(MAX_LEN_FNAM) horizGridFile        CHARACTER*(MAX_LEN_FNAM) horizGridFile
117        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile
118          CHARACTER*(MAX_LEN_FNAM) addWwallFile, addSwallFile
119        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile
120        CHARACTER*(MAX_LEN_FNAM) diffKrFile        CHARACTER*(MAX_LEN_FNAM) diffKrFile
121        CHARACTER*(MAX_LEN_FNAM) viscAhDfile        CHARACTER*(MAX_LEN_FNAM) viscAhDfile
# Line 133  C     the_run_name    :: string identify Line 134  C     the_run_name    :: string identify
134        CHARACTER*(MAX_LEN_FNAM) uVelInitFile        CHARACTER*(MAX_LEN_FNAM) uVelInitFile
135        CHARACTER*(MAX_LEN_FNAM) vVelInitFile        CHARACTER*(MAX_LEN_FNAM) vVelInitFile
136        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile
137        CHARACTER*(MAX_LEN_FNAM) dQdTfile        CHARACTER*(MAX_LEN_FNAM) pLoadFile
138        CHARACTER*(MAX_LEN_FNAM) ploadFile        CHARACTER*(MAX_LEN_FNAM) addMassFile
139        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile
140        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile
141          CHARACTER*(MAX_LEN_FNAM) geothermalFile
142        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile
143        CHARACTER*(MAX_LEN_FNAM) lambdaSaltFile        CHARACTER*(MAX_LEN_FNAM) lambdaSaltFile
144        CHARACTER*(MAX_LEN_PREC/2) the_run_name        CHARACTER*(MAX_LEN_PREC/2) the_run_name
145    
146  C--   COMMON /PARM_I/ Integer valued parameters used by the model.  C--   COMMON /PARM_I/ Integer valued parameters used by the model.
147  C     cg2dMaxIters        :: Maximum number of iterations in the  C     cg2dMaxIters        :: Maximum number of iterations in the
148  C                           two-dimensional con. grad solver.  C                            two-dimensional con. grad solver.
149  C     cg2dChkResFreq      :: Frequency with which to check residual  C     cg2dChkResFreq      :: Frequency with which to check residual
150  C                           in con. grad solver.  C                            in con. grad solver.
151  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner
152  C                            (non-linear free-surf.)  C                            (non-linear free-surf.)
153    C     cg2dUseMinResSol    :: =0 : use last-iteration/converged solution
154    C                            =1 : use solver minimum-residual solution
155  C     cg3dMaxIters        :: Maximum number of iterations in the  C     cg3dMaxIters        :: Maximum number of iterations in the
156  C                           three-dimensional con. grad solver.  C                            three-dimensional con. grad solver.
157  C     cg3dChkResFreq      :: Frequency with which to check residual  C     cg3dChkResFreq      :: Frequency with which to check residual
158  C                           in con. grad solver.  C                            in con. grad solver.
159  C     printResidualFreq   :: Frequency for printing residual in CG iterations  C     printResidualFreq   :: Frequency for printing residual in CG iterations
160  C     nIter0              :: Start time-step number of for this run  C     nIter0              :: Start time-step number of for this run
161  C     nTimeSteps          :: Number of timesteps to execute  C     nTimeSteps          :: Number of timesteps to execute
162  C     writeStatePrec      :: Precision used for writing model state.  C     nTimeSteps_l2       :: Number of inner timesteps to execute per timestep
 C     writeBinaryPrec     :: Precision used for writing binary files  
 C     readBinaryPrec      :: Precision used for reading binary files  
163  C     selectCoriMap       :: select setting of Coriolis parameter map:  C     selectCoriMap       :: select setting of Coriolis parameter map:
164  C                           =0 f-Plane (Constant Coriolis, = f0)  C                           =0 f-Plane (Constant Coriolis, = f0)
165  C                           =1 Beta-Plane Coriolis (= f0 + beta.y)  C                           =1 Beta-Plane Coriolis (= f0 + beta.y)
# Line 170  C     select_rStar        :: option rela Line 172  C     select_rStar        :: option rela
172  C                           =0 (default) use r coord. ; > 0 use r*  C                           =0 (default) use r coord. ; > 0 use r*
173  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:
174  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.
175    C     selectP_inEOS_Zc    :: select which pressure to use in EOS (for z-coords)
176    C                           =0: simply: -g*rhoConst*z
177    C                           =1: use pRef = integral{-g*rho(Tref,Sref,pRef)*dz}
178    C                           =2: use hydrostatic dynamical pressure
179    C                           =3: use full (Hyd+NH) dynamical pressure
180  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior
181  C                            (3-D generalisation of oceanic real-fresh water flux)  C                            (3-D generalisation of oceanic real-fresh water flux)
182  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)
183    C     selectImplicitDrag  :: select Implicit treatment of bottom/top drag
184    C                           = 0: fully explicit
185    C                           = 1: implicit on provisional velocity
186    C                                (i.e., before grad.Eta increment)
187    C                           = 2: fully implicit (combined with Impl Surf.Press)
188  C     momForcingOutAB     :: =1: take momentum forcing contribution  C     momForcingOutAB     :: =1: take momentum forcing contribution
189  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
190  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution
191  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
192  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector
193  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector
194  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector
195  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector
196  C     selectKEscheme      :: Kinetic Energy scheme selector (Vector Inv.)  C     selectKEscheme      :: Kinetic Energy scheme selector (Vector Inv.)
197  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)
198    C     selectBotDragQuadr  :: quadratic bottom drag discretisation option:
199    C                           =0: average KE from grid center to U & V location
200    C                           =1: use local velocity norm @ U & V location
201    C                           =2: same with wet-point averaging of other component
202    C     readBinaryPrec      :: Precision used for reading binary files
203    C     writeStatePrec      :: Precision used for writing model state.
204    C     writeBinaryPrec     :: Precision used for writing binary files
205    C     rwSuffixType        :: controls the format of the mds file suffix.
206    C                          =0 (default): use iteration number (myIter, I10.10);
207    C                          =1: 100*myTime (100th sec); =2: myTime (seconds);
208    C                          =3: myTime/360 (10th of hr); =4: myTime/3600 (hours).
209  C     monitorSelect       :: select group of variables to monitor  C     monitorSelect       :: select group of variables to monitor
210  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface
211  C-    debugLevel          :: controls printing of algorithm intermediate results  C-    debugLevel          :: controls printing of algorithm intermediate results
212  C                            and statistics ; higher -> more writing  C                            and statistics ; higher -> more writing
213    C-    plotLevel           :: controls printing of field maps ; higher -> more flds
214    
215        COMMON /PARM_I/        COMMON /PARM_I/
216       &        cg2dMaxIters, cg2dChkResFreq, cg2dPreCondFreq,       &        cg2dMaxIters, cg2dChkResFreq,
217         &        cg2dPreCondFreq, cg2dUseMinResSol,
218       &        cg3dMaxIters, cg3dChkResFreq,       &        cg3dMaxIters, cg3dChkResFreq,
219       &        printResidualFreq,       &        printResidualFreq,
220       &        nIter0, nTimeSteps, nEndIter,       &        nIter0, nTimeSteps, nTimeSteps_l2, nEndIter,
      &        writeStatePrec,  
      &        writeBinaryPrec, readBinaryPrec,  
221       &        selectCoriMap,       &        selectCoriMap,
222       &        selectSigmaCoord,       &        selectSigmaCoord,
223       &        nonlinFreeSurf, select_rStar,       &        nonlinFreeSurf, select_rStar,
224       &        selectNHfreeSurf,       &        selectNHfreeSurf, selectP_inEOS_Zc,
225       &        selectAddFluid,       &        selectAddFluid, selectImplicitDrag,
226       &        momForcingOutAB, tracForcingOutAB,       &        momForcingOutAB, tracForcingOutAB,
227       &        tempAdvScheme, tempVertAdvScheme,       &        tempAdvScheme, tempVertAdvScheme,
228       &        saltAdvScheme, saltVertAdvScheme,       &        saltAdvScheme, saltVertAdvScheme,
229       &        selectKEscheme, selectVortScheme,       &        selectKEscheme, selectVortScheme,
230       &        monitorSelect, debugLevel       &        selectBotDragQuadr,
231         &        readBinaryPrec, writeBinaryPrec, writeStatePrec,
232         &        rwSuffixType, monitorSelect, debugLevel, plotLevel
233        INTEGER cg2dMaxIters        INTEGER cg2dMaxIters
234        INTEGER cg2dChkResFreq        INTEGER cg2dChkResFreq
235        INTEGER cg2dPreCondFreq        INTEGER cg2dPreCondFreq
236          INTEGER cg2dUseMinResSol
237        INTEGER cg3dMaxIters        INTEGER cg3dMaxIters
238        INTEGER cg3dChkResFreq        INTEGER cg3dChkResFreq
239        INTEGER printResidualFreq        INTEGER printResidualFreq
240        INTEGER nIter0        INTEGER nIter0
241        INTEGER nTimeSteps        INTEGER nTimeSteps
242          INTEGER nTimeSteps_l2
243        INTEGER nEndIter        INTEGER nEndIter
       INTEGER writeStatePrec  
       INTEGER writeBinaryPrec  
       INTEGER readBinaryPrec  
244        INTEGER selectCoriMap        INTEGER selectCoriMap
245        INTEGER selectSigmaCoord        INTEGER selectSigmaCoord
246        INTEGER nonlinFreeSurf        INTEGER nonlinFreeSurf
247        INTEGER select_rStar        INTEGER select_rStar
248        INTEGER selectNHfreeSurf        INTEGER selectNHfreeSurf
249          INTEGER selectP_inEOS_Zc
250        INTEGER selectAddFluid        INTEGER selectAddFluid
251          INTEGER selectImplicitDrag
252        INTEGER momForcingOutAB, tracForcingOutAB        INTEGER momForcingOutAB, tracForcingOutAB
253        INTEGER tempAdvScheme, tempVertAdvScheme        INTEGER tempAdvScheme, tempVertAdvScheme
254        INTEGER saltAdvScheme, saltVertAdvScheme        INTEGER saltAdvScheme, saltVertAdvScheme
255        INTEGER selectKEscheme        INTEGER selectKEscheme
256        INTEGER selectVortScheme        INTEGER selectVortScheme
257          INTEGER selectBotDragQuadr
258          INTEGER readBinaryPrec
259          INTEGER writeStatePrec
260          INTEGER writeBinaryPrec
261          INTEGER rwSuffixType
262        INTEGER monitorSelect        INTEGER monitorSelect
263        INTEGER debugLevel        INTEGER debugLevel
264          INTEGER plotLevel
265    
266  C--   COMMON /PARM_L/ Logical valued parameters used by the model.  C--   COMMON /PARM_L/ Logical valued parameters used by the model.
267  C- Coordinate + Grid params:  C- Coordinate + Grid params:
268  C     fluidIsAir       :: Set to indicate that the fluid major constituent  C     fluidIsAir       :: Set to indicate that the fluid major constituent
269  C                        is air  C                         is air
270  C     fluidIsWater     :: Set to indicate that the fluid major constituent  C     fluidIsWater     :: Set to indicate that the fluid major constituent
271  C                        is water  C                         is water
272  C     usingPCoords     :: Set to indicate that we are working in a pressure  C     usingPCoords     :: Set to indicate that we are working in a pressure
273  C                        type coordinate (p or p*).  C                         type coordinate (p or p*).
274  C     usingZCoords     :: Set to indicate that we are working in a height  C     usingZCoords     :: Set to indicate that we are working in a height
275  C                        type coordinate (z or z*)  C                         type coordinate (z or z*)
 C     useDynP_inEos_Zc :: use the dynamical pressure in EOS (with Z-coord.)  
 C                         this requires specific code for restart & exchange  
276  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian
277  C                          coordinate frame.  C                           coordinate frame.
278  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a
279  C                               spherical polar frame.  C                                spherical polar frame.
280  C     rotateGrid      :: rotate grid coordinates to geographical coordinates  C     rotateGrid      :: rotate grid coordinates to geographical coordinates
281  C                        according to Euler angles phiEuler, thetaEuler, psiEuler  C                        according to Euler angles phiEuler, thetaEuler, psiEuler
 C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)  
282  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical
283    C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)
284    C     hasWetCSCorners :: domain contains CS-type corners where dynamics is solved
285  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)
286  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)
287  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)
288  C- Momentum params:  C- Momentum params:
289  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.
290  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.
291    C     bottomVisc_pCell :: account for partial-cell in bottom visc. (no-slip BC)
292    C     useSmag3D      :: Use isotropic 3-D Smagorinsky
293  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable
294  C                       on irregular grids)  C                       on irregular grids)
295  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms
# Line 280  C     useJamartMomAdv :: Use wet-point m Line 313  C     useJamartMomAdv :: Use wet-point m
313  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term
314  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity (V.I., advection)  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity (V.I., advection)
315  C     useAbsVorticity :: work with f+zeta in Coriolis terms  C     useAbsVorticity :: work with f+zeta in Coriolis terms
316  C     upwindShear        :: use 1rst order upwind interp. (V.I., vertical advection)  C     upwindShear     :: use 1rst order upwind interp. (V.I., vertical advection)
317  C     momStepping    :: Turns momentum equation time-stepping off  C     momStepping    :: Turns momentum equation time-stepping off
318  C     calc_wVelocity :: Turns of vertical velocity calculation off  C     calc_wVelocity :: Turns vertical velocity calculation off
319  C- Temp. & Salt params:  C- Temp. & Salt params:
320  C     tempStepping   :: Turns temperature equation time-stepping off  C     tempStepping   :: Turns temperature equation time-stepping on/off
321  C     saltStepping   :: Turns salinity equation time-stepping off  C     saltStepping   :: Turns salinity equation time-stepping on/off
322    C     addFrictionHeating :: account for frictional heating
323  C     tempAdvection  :: Flag which turns advection of temperature on and off.  C     tempAdvection  :: Flag which turns advection of temperature on and off.
324    C     tempVertDiff4  :: use vertical bi-harmonic diffusion for temperature
325  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer
326  C     tempForcing    :: Flag which turns external forcing of temperature on  C     tempForcing    :: Flag which turns external forcing of temperature on/off
 C                       and off.  
327  C     saltAdvection  :: Flag which turns advection of salinity on and off.  C     saltAdvection  :: Flag which turns advection of salinity on and off.
328    C     saltVertDiff4  :: use vertical bi-harmonic diffusion for salinity
329  C     saltIsActiveTr :: Salinity  is a dynamically active tracer  C     saltIsActiveTr :: Salinity  is a dynamically active tracer
330  C     saltForcing    :: Flag which turns external forcing of salinity on  C     saltForcing    :: Flag which turns external forcing of salinity on/off
 C                       and off.  
331  C     maskIniTemp    :: apply mask to initial Pot.Temp.  C     maskIniTemp    :: apply mask to initial Pot.Temp.
332  C     maskIniSalt    :: apply mask to initial salinity  C     maskIniSalt    :: apply mask to initial salinity
333  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.
334  C     checkIniSalt   :: check for points with identically zero initial salinity  C     checkIniSalt   :: check for points with identically zero initial salinity
 C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux  
 C                         as a real Fresh Water (=> changes the Sea Level)  
 C                         if F, converts P+R-E to salt flux (no SL effect)  
335  C- Pressure solver related parameters (PARM02)  C- Pressure solver related parameters (PARM02)
336  C     useSRCGSolver  :: Set to true to use conjugate gradient  C     useSRCGSolver  :: Set to true to use conjugate gradient
337  C                       solver with single reduction (only one call of  C                       solver with single reduction (only one call of
338  C                       s/r mpi_allreduce), default is false  C                       s/r mpi_allreduce), default is false
339  C- Time-stepping params:  C- Time-stepping & free-surface params:
340  C     rigidLid            :: Set to true to use rigid lid  C     rigidLid            :: Set to true to use rigid lid
341  C     implicitFreeSurface :: Set to true to use implicit free surface  C     implicitFreeSurface :: Set to true to use implicit free surface
342    C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the
343    C                            linear relation Phi_surf = Bo_surf*eta
344    C     uniformFreeSurfLev  :: TRUE if free-surface level-index is uniform (=1)
345  C     exactConserv        :: Set to true to conserve exactly the total Volume  C     exactConserv        :: Set to true to conserve exactly the total Volume
346  C     linFSConserveTr     :: Set to true to correct source/sink of tracer  C     linFSConserveTr     :: Set to true to correct source/sink of tracer
347  C                            at the surface due to Linear Free Surface  C                            at the surface due to Linear Free Surface
348  C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux
349  C                            linear relation Phi_surf = Bo_surf*eta  C                         as a real Fresh Water (=> changes the Sea Level)
350    C                         if F, converts P+R-E to salt flux (no SL effect)
351    C     storePhiHyd4Phys :: store hydrostatic potential for use in Physics/EOS
352    C                         this requires specific code for restart & exchange
353  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm
354  C     nonHydrostatic   :: Using non-hydrostatic algorithm  C     nonHydrostatic   :: Using non-hydrostatic algorithm
355  C     use3Dsolver      :: set to true to use 3-D pressure solver  C     use3Dsolver      :: set to true to use 3-D pressure solver
356  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly
357  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S
358    C     applyExchUV_early :: Apply EXCH to U,V earlier, just before integr_continuity
359  C     doResetHFactors   :: Do reset thickness factors @ beginning of each time-step  C     doResetHFactors   :: Do reset thickness factors @ beginning of each time-step
360  C     implicitDiffusion :: Turns implicit vertical diffusion on  C     implicitDiffusion :: Turns implicit vertical diffusion on
361  C     implicitViscosity :: Turns implicit vertical viscosity on  C     implicitViscosity :: Turns implicit vertical viscosity on
362  C     tempImplVertAdv :: Turns on implicit vertical advection for Temperature  C     tempImplVertAdv   :: Turns on implicit vertical advection for Temperature
363  C     saltImplVertAdv :: Turns on implicit vertical advection for Salinity  C     saltImplVertAdv   :: Turns on implicit vertical advection for Salinity
364  C     momImplVertAdv  :: Turns on implicit vertical advection for Momentum  C     momImplVertAdv    :: Turns on implicit vertical advection for Momentum
365  C     multiDimAdvection :: Flag that enable multi-dimension advection  C     multiDimAdvection :: Flag that enable multi-dimension advection
366  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once
367  C     momDissip_In_AB   :: if False, put Dissipation tendency contribution  C     momDissip_In_AB   :: if False, put Dissipation tendency contribution
# Line 338  C     doThetaClimRelax :: Set true if re Line 376  C     doThetaClimRelax :: Set true if re
376  C                        climatology is required.  C                        climatology is required.
377  C     doSaltClimRelax  :: Set true if relaxation to salinity  C     doSaltClimRelax  :: Set true if relaxation to salinity
378  C                        climatology is required.  C                        climatology is required.
379    C     balanceThetaClimRelax :: substract global mean effect at every time step
380    C     balanceSaltClimRelax :: substract global mean effect at every time step
381  C     allowFreezing  :: Allows surface water to freeze and form ice  C     allowFreezing  :: Allows surface water to freeze and form ice
 C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)  
382  C     periodicExternalForcing :: Set true if forcing is time-dependant  C     periodicExternalForcing :: Set true if forcing is time-dependant
383  C- I/O parameters -  C- I/O parameters -
384  C     globalFiles    :: Selects between "global" and "tiled" files.  C     globalFiles    :: Selects between "global" and "tiled" files.
# Line 359  C     snapshot_mdsio     :: use mdsio fo Line 398  C     snapshot_mdsio     :: use mdsio fo
398  C     monitor_stdio      :: use stdio for monitor output  C     monitor_stdio      :: use stdio for monitor output
399  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)
400  C                        & Last iteration, in addition multiple of dumpFreq iter.  C                        & Last iteration, in addition multiple of dumpFreq iter.
 C     printDomain     :: controls printing of domain fields (bathy, hFac ...).  
401    
402        COMMON /PARM_L/        COMMON /PARM_L/
403       & fluidIsAir, fluidIsWater,       & fluidIsAir, fluidIsWater,
404       & usingPCoords, usingZCoords, useDynP_inEos_Zc,       & usingPCoords, usingZCoords,
405       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,
406       & usingCurvilinearGrid, usingCylindricalGrid,       & usingCylindricalGrid, usingCurvilinearGrid, hasWetCSCorners,
407       & deepAtmosphere, setInterFDr, setCenterDr,       & deepAtmosphere, setInterFDr, setCenterDr,
408       & no_slip_sides, no_slip_bottom,       & no_slip_sides, no_slip_bottom, bottomVisc_pCell, useSmag3D,
409       & useFullLeith, useStrainTensionVisc, useAreaViscLength,       & useFullLeith, useStrainTensionVisc, useAreaViscLength,
410       & momViscosity, momAdvection, momForcing,       & momViscosity, momAdvection, momForcing,
411       & momPressureForcing, metricTerms, useNHMTerms,       & momPressureForcing, metricTerms, useNHMTerms,
# Line 377  C     printDomain     :: controls printi Line 415  C     printDomain     :: controls printi
415       & upwindVorticity, highOrderVorticity,       & upwindVorticity, highOrderVorticity,
416       & useAbsVorticity, upwindShear,       & useAbsVorticity, upwindShear,
417       & momStepping, calc_wVelocity, tempStepping, saltStepping,       & momStepping, calc_wVelocity, tempStepping, saltStepping,
418       & tempAdvection, tempIsActiveTr, tempForcing,       & addFrictionHeating,
419       & saltAdvection, saltIsActiveTr, saltForcing,       & tempAdvection, tempVertDiff4, tempIsActiveTr, tempForcing,
420         & saltAdvection, saltVertDiff4, saltIsActiveTr, saltForcing,
421       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,
422       & useRealFreshWaterFlux, useSRCGSolver,       & useSRCGSolver,
423       & rigidLid, implicitFreeSurface, exactConserv, linFSConserveTr,       & rigidLid, implicitFreeSurface,
424       & uniformLin_PhiSurf,       & uniformLin_PhiSurf, uniformFreeSurfLev,
425       & quasiHydrostatic, nonHydrostatic, use3Dsolver,       & exactConserv, linFSConserveTr, useRealFreshWaterFlux,
426       & implicitIntGravWave, staggerTimeStep, doResetHFactors,       & storePhiHyd4Phys, quasiHydrostatic, nonHydrostatic,
427         & use3Dsolver, implicitIntGravWave, staggerTimeStep,
428         & applyExchUV_early, doResetHFactors,
429       & implicitDiffusion, implicitViscosity,       & implicitDiffusion, implicitViscosity,
430       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,
431       & multiDimAdvection, useMultiDimAdvec,       & multiDimAdvection, useMultiDimAdvec,
432       & momDissip_In_AB, doAB_onGtGs,       & momDissip_In_AB, doAB_onGtGs,
433       & balanceEmPmR, balanceQnet, balancePrintMean,       & balanceEmPmR, balanceQnet, balancePrintMean,
434         & balanceThetaClimRelax, balanceSaltClimRelax,
435       & doThetaClimRelax, doSaltClimRelax,       & doThetaClimRelax, doSaltClimRelax,
436       & allowFreezing, useOldFreezing,       & allowFreezing,
437       & periodicExternalForcing,       & periodicExternalForcing,
438       & globalFiles,       & globalFiles,
439       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,
440       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,
441       & writePickupAtEnd,       & writePickupAtEnd,
442       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
443       & outputTypesInclusive, dumpInitAndLast,       & outputTypesInclusive, dumpInitAndLast
      & printDomain,  
      & inAdMode, inAdTrue, inAdFalse, inAdExact  
444    
445        LOGICAL fluidIsAir        LOGICAL fluidIsAir
446        LOGICAL fluidIsWater        LOGICAL fluidIsWater
447        LOGICAL usingPCoords        LOGICAL usingPCoords
448        LOGICAL usingZCoords        LOGICAL usingZCoords
       LOGICAL useDynP_inEos_Zc  
449        LOGICAL usingCartesianGrid        LOGICAL usingCartesianGrid
450        LOGICAL usingSphericalPolarGrid, rotateGrid        LOGICAL usingSphericalPolarGrid, rotateGrid
451        LOGICAL usingCylindricalGrid        LOGICAL usingCylindricalGrid
452        LOGICAL usingCurvilinearGrid        LOGICAL usingCurvilinearGrid, hasWetCSCorners
453        LOGICAL deepAtmosphere        LOGICAL deepAtmosphere
454        LOGICAL setInterFDr        LOGICAL setInterFDr
455        LOGICAL setCenterDr        LOGICAL setCenterDr
456        LOGICAL useNHMTerms  
457        LOGICAL no_slip_sides        LOGICAL no_slip_sides
458        LOGICAL no_slip_bottom        LOGICAL no_slip_bottom
459          LOGICAL bottomVisc_pCell
460          LOGICAL useSmag3D
461        LOGICAL useFullLeith        LOGICAL useFullLeith
462        LOGICAL useStrainTensionVisc        LOGICAL useStrainTensionVisc
463        LOGICAL useAreaViscLength        LOGICAL useAreaViscLength
# Line 424  C     printDomain     :: controls printi Line 465  C     printDomain     :: controls printi
465        LOGICAL momAdvection        LOGICAL momAdvection
466        LOGICAL momForcing        LOGICAL momForcing
467        LOGICAL momPressureForcing        LOGICAL momPressureForcing
468          LOGICAL metricTerms
469          LOGICAL useNHMTerms
470    
471        LOGICAL useCoriolis        LOGICAL useCoriolis
472          LOGICAL use3dCoriolis
473          LOGICAL useCDscheme
474        LOGICAL vectorInvariantMomentum        LOGICAL vectorInvariantMomentum
475          LOGICAL useEnergyConservingCoriolis
476          LOGICAL useJamartWetPoints
477          LOGICAL useJamartMomAdv
478          LOGICAL upwindVorticity
479          LOGICAL highOrderVorticity
480          LOGICAL useAbsVorticity
481          LOGICAL upwindShear
482          LOGICAL momStepping
483          LOGICAL calc_wVelocity
484          LOGICAL tempStepping
485          LOGICAL saltStepping
486          LOGICAL addFrictionHeating
487        LOGICAL tempAdvection        LOGICAL tempAdvection
488          LOGICAL tempVertDiff4
489        LOGICAL tempIsActiveTr        LOGICAL tempIsActiveTr
490        LOGICAL tempForcing        LOGICAL tempForcing
491        LOGICAL saltAdvection        LOGICAL saltAdvection
492          LOGICAL saltVertDiff4
493        LOGICAL saltIsActiveTr        LOGICAL saltIsActiveTr
494        LOGICAL saltForcing        LOGICAL saltForcing
495        LOGICAL maskIniTemp        LOGICAL maskIniTemp
496        LOGICAL maskIniSalt        LOGICAL maskIniSalt
497        LOGICAL checkIniTemp        LOGICAL checkIniTemp
498        LOGICAL checkIniSalt        LOGICAL checkIniSalt
       LOGICAL useRealFreshWaterFlux  
499        LOGICAL useSRCGSolver        LOGICAL useSRCGSolver
500        LOGICAL rigidLid        LOGICAL rigidLid
501        LOGICAL implicitFreeSurface        LOGICAL implicitFreeSurface
502          LOGICAL uniformLin_PhiSurf
503          LOGICAL uniformFreeSurfLev
504        LOGICAL exactConserv        LOGICAL exactConserv
505        LOGICAL linFSConserveTr        LOGICAL linFSConserveTr
506        LOGICAL uniformLin_PhiSurf        LOGICAL useRealFreshWaterFlux
507          LOGICAL storePhiHyd4Phys
508        LOGICAL quasiHydrostatic        LOGICAL quasiHydrostatic
509        LOGICAL nonHydrostatic        LOGICAL nonHydrostatic
510        LOGICAL use3Dsolver        LOGICAL use3Dsolver
511        LOGICAL implicitIntGravWave        LOGICAL implicitIntGravWave
512        LOGICAL staggerTimeStep        LOGICAL staggerTimeStep
513          LOGICAL applyExchUV_early
514        LOGICAL doResetHFactors        LOGICAL doResetHFactors
       LOGICAL momStepping  
       LOGICAL calc_wVelocity  
       LOGICAL tempStepping  
       LOGICAL saltStepping  
       LOGICAL metricTerms  
       LOGICAL use3dCoriolis  
       LOGICAL useCDscheme  
       LOGICAL useEnergyConservingCoriolis  
       LOGICAL useJamartWetPoints  
       LOGICAL useJamartMomAdv  
       LOGICAL upwindVorticity  
       LOGICAL highOrderVorticity  
       LOGICAL useAbsVorticity  
       LOGICAL upwindShear  
515        LOGICAL implicitDiffusion        LOGICAL implicitDiffusion
516        LOGICAL implicitViscosity        LOGICAL implicitViscosity
517        LOGICAL tempImplVertAdv        LOGICAL tempImplVertAdv
# Line 477  C     printDomain     :: controls printi Line 526  C     printDomain     :: controls printi
526        LOGICAL balancePrintMean        LOGICAL balancePrintMean
527        LOGICAL doThetaClimRelax        LOGICAL doThetaClimRelax
528        LOGICAL doSaltClimRelax        LOGICAL doSaltClimRelax
529          LOGICAL balanceThetaClimRelax
530          LOGICAL balanceSaltClimRelax
531        LOGICAL allowFreezing        LOGICAL allowFreezing
       LOGICAL useOldFreezing  
532        LOGICAL periodicExternalForcing        LOGICAL periodicExternalForcing
533        LOGICAL globalFiles        LOGICAL globalFiles
534        LOGICAL pickupStrictlyMatch        LOGICAL pickupStrictlyMatch
# Line 489  C     printDomain     :: controls printi Line 539  C     printDomain     :: controls printi
539        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio
540        LOGICAL outputTypesInclusive        LOGICAL outputTypesInclusive
541        LOGICAL dumpInitAndLast        LOGICAL dumpInitAndLast
       LOGICAL printDomain  
       LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact  
542    
543  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
544  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 522  C                :: most cell face (Lat- Line 570  C                :: most cell face (Lat-
570  C                :: parameter but it makes geographical references simple.)  C                :: parameter but it makes geographical references simple.)
571  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern
572  C                :: most face (Lat-Lon grid).  C                :: most face (Lat-Lon grid).
573  C     gravity   :: Accel. due to gravity ( m/s^2 )  C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).
574  C     recip_gravity and its inverse  C     recip_rSphere :: Reciprocal radius of sphere ( m^-1 ).
575  C     gBaro     :: Accel. due to gravity used in barotropic equation ( m/s^2 )  C     radius_fromHorizGrid :: sphere Radius of input horiz. grid (Curvilinear Grid)
576  C     rhoNil    :: Reference density for the linear equation of state  C     seaLev_Z   :: the reference height of sea-level (usually zero)
577  C     rhoConst  :: Vertically constant reference density (Boussinesq)  C     top_Pres   :: pressure (P-Coords) or reference pressure (Z-Coords) at the top
578  C     rhoFacC   :: normalized (by rhoConst) reference density at cell-Center  C     rSigmaBnd  :: vertical position (in r-unit) of r/sigma transition (Hybrid-Sigma)
579  C     rhoFacF   :: normalized (by rhoConst) reference density at cell-interFace  C     gravity    :: Acceleration due to constant gravity ( m/s^2 )
580    C     recip_gravity :: Reciprocal gravity acceleration ( s^2/m )
581    C     gBaro      :: Accel. due to gravity used in barotropic equation ( m/s^2 )
582    C     gravFacC   :: gravity factor (vs surf. gravity) vert. profile at cell-Center
583    C     gravFacF   :: gravity factor (vs surf. gravity) vert. profile at cell-interF
584    C     rhoNil     :: Reference density for the linear equation of state
585    C     rhoConst   :: Vertically constant reference density (Boussinesq)
586    C     rho1Ref    :: reference vertical profile for density (anelastic)
587    C     rhoFacC    :: normalized (by rhoConst) reference density at cell-Center
588    C     rhoFacF    :: normalized (by rhoConst) reference density at cell-interFace
589  C     rhoConstFresh :: Constant reference density for fresh water (rain)  C     rhoConstFresh :: Constant reference density for fresh water (rain)
590  C     rho1Ref   :: reference vertical profile for density  C     thetaConst :: Constant reference for potential temperature
591  C     tRef      :: reference vertical profile for potential temperature  C     tRef       :: reference vertical profile for potential temperature
592  C     sRef      :: reference vertical profile for salinity/specific humidity  C     sRef       :: reference vertical profile for salinity/specific humidity
593  C     phiRef    :: reference potential (pressure/rho, geopotential) profile  C     pRef4EOS   :: reference pressure used in EOS (case selectP_inEOS_Zc=1)
594  C     dBdrRef   :: vertical gradient of reference buoyancy  [(m/s/r)^2]:  C     phiRef     :: reference potential (press/rho, geopot) profile (m^2/s^2)
595  C               :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]  C     dBdrRef    :: vertical gradient of reference buoyancy  [(m/s/r)^2]:
596  C               :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]  C                :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]
597    C                :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]
598  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),
599  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].
600  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit
# Line 551  C     rUnit2mass :: units conversion fac Line 609  C     rUnit2mass :: units conversion fac
609  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].
610  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;
611  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;
 C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).  
 C     recip_rSphere  :: Reciprocal radius of sphere ( m ).  
 C     radius_fromHorizGrid :: sphere Radius of input horiz. grid (Curvilinear Grid)  
612  C     f0         :: Reference coriolis parameter ( 1/s )  C     f0         :: Reference coriolis parameter ( 1/s )
613  C                   ( Southern edge f for beta plane )  C                   ( Southern edge f for beta plane )
614  C     beta       :: df/dy ( s^-1.m^-1 )  C     beta       :: df/dy ( s^-1.m^-1 )
# Line 567  C     viscAh     :: Eddy viscosity coeff Line 622  C     viscAh     :: Eddy viscosity coeff
622  C                   momentum laterally ( m^2/s )  C                   momentum laterally ( m^2/s )
623  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical
624  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
625  C                   model, defaults to viscAh if unset ( m^2/s )  C                   model, defaults to viscAhD if unset ( m^2/s )
626  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
627  C     viscA4     :: Biharmonic viscosity coeff. for mixing of  C     viscA4     :: Biharmonic viscosity coeff. for mixing of
628  C                   momentum laterally ( m^4/s )  C                   momentum laterally ( m^4/s )
629  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical
630  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
631  C                   model, defaults to viscA4 if unset ( m^2/s )  C                   model, defaults to viscA4D if unset ( m^2/s )
632  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
633  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally
634  C                   (act on Divergence part) ( m^2/s )  C                   (act on Divergence part) ( m^2/s )
# Line 583  C     viscA4D    :: Biharmonic viscosity Line 638  C     viscA4D    :: Biharmonic viscosity
638  C                   (act on Divergence part) ( m^4/s )  C                   (act on Divergence part) ( m^4/s )
639  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally
640  C                   (act on Vorticity  part) ( m^4/s )  C                   (act on Vorticity  part) ( m^4/s )
641    C     smag3D_coeff :: Isotropic 3-D Smagorinsky coefficient (-)
642  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))
643  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))
644  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))
# Line 605  C     viscA4GridMax:: maximum and minimu Line 661  C     viscA4GridMax:: maximum and minimu
661  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity
662  C     diffKhT   :: Laplacian diffusion coeff. for mixing of  C     diffKhT   :: Laplacian diffusion coeff. for mixing of
663  C                 heat laterally ( m^2/s )  C                 heat laterally ( m^2/s )
 C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of heat vertically ( units of r^2/s )  
664  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of
665  C                 heat laterally ( m^4/s )  C                 heat laterally ( m^4/s )
666    C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.
667    C                 for mixing of heat vertically ( units of r^2/s )
668    C     diffKr4T  :: vertical profile of Biharmonic diffusion coeff.
669    C                 for mixing of heat vertically ( units of r^4/s )
670  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of
671  C                 salt laterally ( m^2/s )  C                 salt laterally ( m^2/s )
 C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of salt vertically ( units of r^2/s ),  
672  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of
673  C                 salt laterally ( m^4/s )  C                 salt laterally ( m^4/s )
674    C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.
675    C                 for mixing of salt vertically ( units of r^2/s ),
676    C     diffKr4S  :: vertical profile of Biharmonic diffusion coeff.
677    C                 for mixing of salt vertically ( units of r^4/s )
678  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979
679  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979
680  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979
# Line 634  C                    Frequency of checkp Line 694  C                    Frequency of checkp
694  C                    are referenced to this clock. ( s )  C                    are referenced to this clock. ( s )
695  C     deltaTMom    :: Timestep for momemtum equations ( s )  C     deltaTMom    :: Timestep for momemtum equations ( s )
696  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k
697  C     deltaTfreesurf :: Timestep for free-surface equation ( s )  C     deltaTFreeSurf :: Timestep for free-surface equation ( s )
698  C     freesurfFac  :: Parameter to turn implicit free surface term on or off  C     freeSurfFac  :: Parameter to turn implicit free surface term on or off
699  C                    freesurfac = 1. uses implicit free surface  C                     freeSurFac = 1. uses implicit free surface
700  C                    freesurfac = 0. uses rigid lid  C                     freeSurFac = 0. uses rigid lid
701  C     abEps        :: Adams-Bashforth-2 stabilizing weight  C     abEps        :: Adams-Bashforth-2 stabilizing weight
702  C     alph_AB      :: Adams-Bashforth-3 primary factor  C     alph_AB      :: Adams-Bashforth-3 primary factor
703  C     beta_AB      :: Adams-Bashforth-3 secondary factor  C     beta_AB      :: Adams-Bashforth-3 secondary factor
704  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :
705  C                     Implicit part of Surface Pressure Gradient ( 0-1 )  C                     Implicit part of Surface Pressure Gradient ( 0-1 )
706  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :  C     implicDiv2DFlow :: parameter of the Crank-Nickelson time stepping :
707  C                     Implicit part of barotropic flow Divergence ( 0-1 )  C                     Implicit part of barotropic flow Divergence ( 0-1 )
708  C     implicitNHPress :: parameter of the Crank-Nickelson time stepping :  C     implicitNHPress :: parameter of the Crank-Nickelson time stepping :
709  C                     Implicit part of Non-Hydrostatic Pressure Gradient ( 0-1 )  C                     Implicit part of Non-Hydrostatic Pressure Gradient ( 0-1 )
# Line 662  C     endTime       :: Ending time for t Line 722  C     endTime       :: Ending time for t
722  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).
723  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).
724  C     dumpFreq      :: Frequency with which model state is written to  C     dumpFreq      :: Frequency with which model state is written to
725  C                     post-processing files ( s ).  C                      post-processing files ( s ).
726  C     diagFreq      :: Frequency with which model writes diagnostic output  C     diagFreq      :: Frequency with which model writes diagnostic output
727  C                     of intermediate quantities.  C                      of intermediate quantities.
728  C     afFacMom      :: Advection of momentum term tracer parameter  C     afFacMom      :: Advection of momentum term tracer parameter
729  C     vfFacMom      :: Momentum viscosity tracer parameter  C     vfFacMom      :: Momentum viscosity tracer parameter
730  C     pfFacMom      :: Momentum pressure forcing tracer parameter  C     pfFacMom      :: Momentum pressure forcing tracer parameter
# Line 700  C     hMixCriteria:: criteria for mixed- Line 760  C     hMixCriteria:: criteria for mixed-
760  C     dRhoSmall   :: parameter for mixed-layer diagnostic  C     dRhoSmall   :: parameter for mixed-layer diagnostic
761  C     hMixSmooth  :: Smoothing parameter for mixed-layer diag (default=0=no smoothing)  C     hMixSmooth  :: Smoothing parameter for mixed-layer diag (default=0=no smoothing)
762  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]
 C     Ro_SeaLevel :: standard position of Sea-Level in "R" coordinate, used as  
 C                    starting value (k=1) for vertical coordinate (rf(1)=Ro_SeaLevel)  
 C     rSigmaBnd   :: vertical position (in r-unit) of r/sigma transition (Hybrid-Sigma)  
763  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)
764  C                           (default=2: full drag ; =1: gives half-slip BC)  C                           (default=2: full drag ; =1: gives half-slip BC)
765  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)
# Line 713  C                           is to be rep Line 770  C                           is to be rep
770  C                           (affects myabs, mymin, mymax)  C                           (affects myabs, mymin, mymax)
771  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales
772  C                      (i.e. allows convection at different Rayleigh numbers)  C                      (i.e. allows convection at different Rayleigh numbers)
773    C     tCylIn        :: Temperature of the cylinder inner boundary
774    C     tCylOut       :: Temperature of the cylinder outer boundary
775  C     phiEuler      :: Euler angle, rotation about original z-axis  C     phiEuler      :: Euler angle, rotation about original z-axis
776  C     thetaEuler    :: Euler angle, rotation about new x-axis  C     thetaEuler    :: Euler angle, rotation about new x-axis
777  C     psiEuler      :: Euler angle, rotation about new z-axis  C     psiEuler      :: Euler angle, rotation about new z-axis
778        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,
779       & cg2dpcOffDFac, cg3dTargetResidual,       & cg2dpcOffDFac, cg3dTargetResidual,
780       & delR, delRc, xgOrigin, ygOrigin,       & delR, delRc, xgOrigin, ygOrigin, rSphere, recip_rSphere,
781       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,       & radius_fromHorizGrid, seaLev_Z, top_Pres, rSigmaBnd,
782         & deltaT, deltaTMom, dTtracerLev, deltaTFreeSurf, deltaTClock,
783       & abEps, alph_AB, beta_AB,       & abEps, alph_AB, beta_AB,
      & rSphere, recip_rSphere, radius_fromHorizGrid,  
784       & f0, beta, fPrime, omega, rotationPeriod,       & f0, beta, fPrime, omega, rotationPeriod,
785       & viscFacAdj, viscAh, viscAhW, viscAhMax,       & viscFacAdj, viscAh, viscAhW, smag3D_coeff,
786       & viscAhGrid, viscAhGridMax, viscAhGridMin,       & viscAhMax, viscAhGrid, viscAhGridMax, viscAhGridMin,
787       & viscC2leith, viscC2leithD,       & viscC2leith, viscC2leithD,
788       & viscC2smag, viscC4smag,       & viscC2smag, viscC4smag,
789       & viscAhD, viscAhZ, viscA4D, viscA4Z,       & viscAhD, viscAhZ, viscA4D, viscA4Z,
# Line 732  C     psiEuler      :: Euler angle, rota Line 791  C     psiEuler      :: Euler angle, rota
791       & viscA4Grid, viscA4GridMax, viscA4GridMin,       & viscA4Grid, viscA4GridMax, viscA4GridMin,
792       & viscAhReMax, viscA4ReMax,       & viscAhReMax, viscA4ReMax,
793       & viscC4leith, viscC4leithD, viscArNr,       & viscC4leith, viscC4leithD, viscArNr,
794       & diffKhT, diffK4T, diffKrNrT,       & diffKhT, diffK4T, diffKrNrT, diffKr4T,
795       & diffKhS, diffK4S, diffKrNrS,       & diffKhS, diffK4S, diffKrNrS, diffKr4S,
796       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,
797       & BL79LatVary,       & BL79LatVary,
798       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,
799       & tauCD, rCD, epsAB_CD,       & tauCD, rCD, epsAB_CD,
800       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,       & freeSurfFac, implicSurfPress, implicDiv2DFlow, implicitNHPress,
801       & hFacMin, hFacMinDz, hFacInf, hFacSup,       & hFacMin, hFacMinDz, hFacInf, hFacSup,
802       & gravity, recip_gravity, gBaro,       & gravity, recip_gravity, gBaro,
803       & rhoNil, rhoConst, recip_rhoConst,       & gravFacC, recip_gravFacC, gravFacF, recip_gravFacF,
804       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,       & rhoNil, rhoConst, recip_rhoConst, rho1Ref,
805       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF, rhoConstFresh,
806         & thetaConst, tRef, sRef, pRef4EOS, phiRef, dBdrRef,
807       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,
808       & baseTime, startTime, endTime,       & baseTime, startTime, endTime,
809       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,
# Line 755  C     psiEuler      :: Euler angle, rota Line 815  C     psiEuler      :: Euler angle, rota
815       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,
816       & temp_addMass, salt_addMass, hFacMinDr, hFacMinDp,       & temp_addMass, salt_addMass, hFacMinDr, hFacMinDp,
817       & ivdc_kappa, hMixCriteria, dRhoSmall, hMixSmooth,       & ivdc_kappa, hMixCriteria, dRhoSmall, hMixSmooth,
      & Ro_SeaLevel, rSigmaBnd,  
818       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,
819       & smoothAbsFuncRange,       & smoothAbsFuncRange,
820       & tCylIn, tCylOut,       & tCylIn, tCylOut,
# Line 769  C     psiEuler      :: Euler angle, rota Line 828  C     psiEuler      :: Euler angle, rota
828        _RL delRc(Nr+1)        _RL delRc(Nr+1)
829        _RL xgOrigin        _RL xgOrigin
830        _RL ygOrigin        _RL ygOrigin
831          _RL rSphere
832          _RL recip_rSphere
833          _RL radius_fromHorizGrid
834          _RL seaLev_Z
835          _RL top_Pres
836          _RL rSigmaBnd
837        _RL deltaT        _RL deltaT
838        _RL deltaTClock        _RL deltaTClock
839        _RL deltaTmom        _RL deltaTMom
840        _RL dTtracerLev(Nr)        _RL dTtracerLev(Nr)
841        _RL deltaTfreesurf        _RL deltaTFreeSurf
842        _RL abEps, alph_AB, beta_AB        _RL abEps, alph_AB, beta_AB
       _RL rSphere  
       _RL recip_rSphere  
       _RL radius_fromHorizGrid  
843        _RL f0        _RL f0
844        _RL beta        _RL beta
845        _RL fPrime        _RL fPrime
# Line 785  C     psiEuler      :: Euler angle, rota Line 847  C     psiEuler      :: Euler angle, rota
847        _RL rotationPeriod        _RL rotationPeriod
848        _RL freeSurfFac        _RL freeSurfFac
849        _RL implicSurfPress        _RL implicSurfPress
850        _RL implicDiv2Dflow        _RL implicDiv2DFlow
851        _RL implicitNHPress        _RL implicitNHPress
852        _RL hFacMin        _RL hFacMin
853        _RL hFacMinDz        _RL hFacMinDz
# Line 799  C     psiEuler      :: Euler angle, rota Line 861  C     psiEuler      :: Euler angle, rota
861        _RL viscAhW        _RL viscAhW
862        _RL viscAhD        _RL viscAhD
863        _RL viscAhZ        _RL viscAhZ
864          _RL smag3D_coeff
865        _RL viscAhMax        _RL viscAhMax
866        _RL viscAhReMax        _RL viscAhReMax
867        _RL viscAhGrid, viscAhGridMax, viscAhGridMin        _RL viscAhGrid, viscAhGridMax, viscAhGridMin
# Line 816  C     psiEuler      :: Euler angle, rota Line 879  C     psiEuler      :: Euler angle, rota
879        _RL viscC4leithD        _RL viscC4leithD
880        _RL viscC4smag        _RL viscC4smag
881        _RL diffKhT        _RL diffKhT
       _RL diffKrNrT(Nr)  
882        _RL diffK4T        _RL diffK4T
883          _RL diffKrNrT(Nr)
884          _RL diffKr4T(Nr)
885        _RL diffKhS        _RL diffKhS
       _RL diffKrNrS(Nr)  
886        _RL diffK4S        _RL diffK4S
887          _RL diffKrNrS(Nr)
888          _RL diffKr4S(Nr)
889        _RL diffKrBL79surf        _RL diffKrBL79surf
890        _RL diffKrBL79deep        _RL diffKrBL79deep
891        _RL diffKrBL79scl        _RL diffKrBL79scl
# Line 831  C     psiEuler      :: Euler angle, rota Line 896  C     psiEuler      :: Euler angle, rota
896        _RL diffKrBLEQscl        _RL diffKrBLEQscl
897        _RL diffKrBLEQHo        _RL diffKrBLEQHo
898        _RL tauCD, rCD, epsAB_CD        _RL tauCD, rCD, epsAB_CD
899        _RL gravity        _RL gravity,       recip_gravity
       _RL recip_gravity  
900        _RL gBaro        _RL gBaro
901          _RL gravFacC(Nr),   recip_gravFacC(Nr)
902          _RL gravFacF(Nr+1), recip_gravFacF(Nr+1)
903        _RL rhoNil        _RL rhoNil
904        _RL rhoConst,      recip_rhoConst        _RL rhoConst,      recip_rhoConst
905          _RL rho1Ref(Nr)
906        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)
907        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)
908        _RL rhoConstFresh        _RL rhoConstFresh
909        _RL rho1Ref(Nr)        _RL thetaConst
910        _RL tRef(Nr)        _RL tRef(Nr)
911        _RL sRef(Nr)        _RL sRef(Nr)
912          _RL pRef4EOS(Nr)
913        _RL phiRef(2*Nr+1)        _RL phiRef(2*Nr+1)
914        _RL dBdrRef(Nr)        _RL dBdrRef(Nr)
915        _RL rVel2wUnit(Nr+1), wUnit2rVel(Nr+1)        _RL rVel2wUnit(Nr+1), wUnit2rVel(Nr+1)
# Line 880  C     psiEuler      :: Euler angle, rota Line 948  C     psiEuler      :: Euler angle, rota
948        _RL hMixCriteria        _RL hMixCriteria
949        _RL dRhoSmall        _RL dRhoSmall
950        _RL hMixSmooth        _RL hMixSmooth
       _RL Ro_SeaLevel  
       _RL rSigmaBnd  
951        _RL sideDragFactor        _RL sideDragFactor
952        _RL bottomDragLinear        _RL bottomDragLinear
953        _RL bottomDragQuadratic        _RL bottomDragQuadratic
954        _RL smoothAbsFuncRange        _RL smoothAbsFuncRange
955        _RL nh_Am2        _RL nh_Am2
956        _RL tCylIn        _RL tCylIn, tCylOut
       _RL tCylOut  
957        _RL phiEuler, thetaEuler, psiEuler        _RL phiEuler, thetaEuler, psiEuler
958    
959  C--   COMMON /PARM_A/ Thermodynamics constants ?  C--   COMMON /PARM_A/ Thermodynamics constants ?
960        COMMON /PARM_A/ HeatCapacity_Cp,recip_Cp        COMMON /PARM_A/ HeatCapacity_Cp
961        _RL HeatCapacity_Cp        _RL HeatCapacity_Cp
       _RL recip_Cp  
962    
963  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)
964  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin
# Line 923  C Logical flags for selecting packages Line 987  C Logical flags for selecting packages
987        LOGICAL useZONAL_FILT        LOGICAL useZONAL_FILT
988        LOGICAL useOPPS        LOGICAL useOPPS
989        LOGICAL usePP81        LOGICAL usePP81
990          LOGICAL useKL10
991        LOGICAL useMY82        LOGICAL useMY82
992        LOGICAL useGGL90        LOGICAL useGGL90
993        LOGICAL useKPP        LOGICAL useKPP
# Line 934  C Logical flags for selecting packages Line 999  C Logical flags for selecting packages
999        LOGICAL useBulkForce        LOGICAL useBulkForce
1000        LOGICAL useEBM        LOGICAL useEBM
1001        LOGICAL useCheapAML        LOGICAL useCheapAML
1002          LOGICAL useAUTODIFF
1003        LOGICAL useGrdchk        LOGICAL useGrdchk
1004        LOGICAL useSMOOTH        LOGICAL useSMOOTH
1005          LOGICAL usePROFILES
1006        LOGICAL useECCO        LOGICAL useECCO
1007          LOGICAL useCTRL
1008        LOGICAL useSBO        LOGICAL useSBO
1009        LOGICAL useFLT        LOGICAL useFLT
1010        LOGICAL usePTRACERS        LOGICAL usePTRACERS
# Line 951  C Logical flags for selecting packages Line 1019  C Logical flags for selecting packages
1019        LOGICAL useStreamIce        LOGICAL useStreamIce
1020        LOGICAL useICEFRONT        LOGICAL useICEFRONT
1021        LOGICAL useThSIce        LOGICAL useThSIce
1022          LOGICAL useLand
1023        LOGICAL useATM2d        LOGICAL useATM2d
1024        LOGICAL useAIM        LOGICAL useAIM
1025        LOGICAL useLand        LOGICAL useAtm_Phys
1026        LOGICAL useFizhi        LOGICAL useFizhi
1027        LOGICAL useGridAlt        LOGICAL useGridAlt
1028        LOGICAL useDiagnostics        LOGICAL useDiagnostics
# Line 965  C Logical flags for selecting packages Line 1034  C Logical flags for selecting packages
1034        LOGICAL useMYPACKAGE        LOGICAL useMYPACKAGE
1035        COMMON /PARM_PACKAGES/        COMMON /PARM_PACKAGES/
1036       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,
1037       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,       &        useOPPS, usePP81, useKL10, useMY82, useGGL90, useKPP,
1038       &        useGMRedi, useBBL, useDOWN_SLOPE,       &        useGMRedi, useBBL, useDOWN_SLOPE,
1039       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,
1040       &        useGrdchk, useSMOOTH, useECCO, useSBO, useFLT,       &        useGrdchk, useSMOOTH, usePROFILES, useECCO, useCTRL,
1041         &        useSBO, useFLT, useAUTODIFF,
1042       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,
1043       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,
1044       &        useStreamIce, useICEFRONT, useThSIce,       &        useStreamIce, useICEFRONT, useThSIce, useLand,
1045       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,       &        useATM2D, useAIM, useAtm_Phys, useFizhi, useGridAlt,
1046       &        useDiagnostics, useREGRID, useLayers, useMNC,       &        useDiagnostics, useREGRID, useLayers, useMNC,
1047       &        useRunClock, useEMBED_FILES,       &        useRunClock, useEMBED_FILES,
1048       &        useMYPACKAGE       &        useMYPACKAGE
1049    
 C     Logical flags for turning off parts of the code in adjoint mode  
       LOGICAL useKPPinAdMode, useKPPinFwdMode  
       LOGICAL useGMrediInAdMode, useGMrediInFwdMode  
       LOGICAL useSEAICEinAdMode, useSEAICEinFwdMode  
       COMMON /PARM_PACKAGES_ADJ/  
      &       useKPPinAdMode, useKPPinFwdMode,  
      &       useGMrediInAdMode, useGMrediInFwdMode,  
      &       useSEAICEinAdMode, useSEAICEinFwdMode  
   
1050  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
1051  CEH3 ;;; mode:fortran ***  CEH3 ;;; mode:fortran ***
1052  CEH3 ;;; End: ***  CEH3 ;;; End: ***

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