/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.262 by gforget, Fri Jun 22 02:03:02 2012 UTC revision 1.274 by jmc, Tue May 6 15:45:21 2014 UTC
# Line 14  C     here. Notes describing the paramet Line 14  C     here. Notes describing the paramet
14    
15  CEOP  CEOP
16    
 C     Macros for special grid options  
 #include "PARAMS_MACROS.h"  
   
17  C--   Contants  C--   Contants
18  C     Useful physical values  C     Useful physical values
19        Real*8 PI        Real*8 PI
# Line 52  C     bathyFile       :: File containing Line 49  C     bathyFile       :: File containing
49  C                        is taken from inline function.  C                        is taken from inline function.
50  C     topoFile        :: File containing the topography of the surface (unit=m)  C     topoFile        :: File containing the topography of the surface (unit=m)
51  C                        (mainly used for the atmosphere = ground height).  C                        (mainly used for the atmosphere = ground height).
52    C     addWwallFile    :: File containing 2-D additional Western  cell-edge wall
53    C     addSwallFile    :: File containing 2-D additional Southern cell-edge wall
54    C                        (e.g., to add "thin-wall" where it is =1)
55  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)
56  C                        for potential temperature.  C                        for potential temperature.
57  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)
# Line 71  C     surfQfile       :: File containing Line 71  C     surfQfile       :: File containing
71  C                        (old version, kept for backward compatibility)  C                        (old version, kept for backward compatibility)
72  C     surfQnetFile    :: File containing surface net heat flux  C     surfQnetFile    :: File containing surface net heat flux
73  C     surfQswFile     :: File containing surface shortwave radiation  C     surfQswFile     :: File containing surface shortwave radiation
 C     dQdTfile        :: File containing thermal relaxation coefficient  
74  C     EmPmRfile       :: File containing surface fresh water flux  C     EmPmRfile       :: File containing surface fresh water flux
75  C           NOTE: for backward compatibility EmPmRfile is specified in  C           NOTE: for backward compatibility EmPmRfile is specified in
76  C                 m/s when using external_fields_load.F.  It is converted  C                 m/s when using external_fields_load.F.  It is converted
77  C                 to kg/m2/s by multiplying by rhoConstFresh.  C                 to kg/m2/s by multiplying by rhoConstFresh.
78  C     saltFluxFile    :: File containing surface salt flux  C     saltFluxFile    :: File containing surface salt flux
79  C     pLoadFile       :: File containing pressure loading  C     pLoadFile       :: File containing pressure loading
80    C     addMassFile     :: File containing source/sink of fluid in the interior
81  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data
82  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data
83  C     the_run_name    :: string identifying the name of the model "run"  C     the_run_name    :: string identifying the name of the model "run"
# Line 87  C     the_run_name    :: string identify Line 87  C     the_run_name    :: string identify
87       &                tRefFile, sRefFile, rhoRefFile,       &                tRefFile, sRefFile, rhoRefFile,
88       &                delRFile, delRcFile, hybSigmFile,       &                delRFile, delRcFile, hybSigmFile,
89       &                delXFile, delYFile, horizGridFile,       &                delXFile, delYFile, horizGridFile,
90       &                bathyFile, topoFile,       &                bathyFile, topoFile, addWwallFile, addSwallFile,
91       &                viscAhDfile, viscAhZfile,       &                viscAhDfile, viscAhZfile,
92       &                viscA4Dfile, viscA4Zfile,       &                viscA4Dfile, viscA4Zfile,
93       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,
# Line 97  C     the_run_name    :: string identify Line 97  C     the_run_name    :: string identify
97       &                surfQfile, surfQnetFile, surfQswFile,       &                surfQfile, surfQnetFile, surfQswFile,
98       &                lambdaThetaFile, lambdaSaltFile,       &                lambdaThetaFile, lambdaSaltFile,
99       &                uVelInitFile, vVelInitFile, pSurfInitFile,       &                uVelInitFile, vVelInitFile, pSurfInitFile,
100       &                dQdTfile, ploadFile,       &                pLoadFile, addMassFile,
101       &                eddyPsiXFile, eddyPsiYFile,       &                eddyPsiXFile, eddyPsiYFile,
102       &                the_run_name       &                the_run_name
103        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation
# Line 115  C     the_run_name    :: string identify Line 115  C     the_run_name    :: string identify
115        CHARACTER*(MAX_LEN_FNAM) delYFile        CHARACTER*(MAX_LEN_FNAM) delYFile
116        CHARACTER*(MAX_LEN_FNAM) horizGridFile        CHARACTER*(MAX_LEN_FNAM) horizGridFile
117        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile
118          CHARACTER*(MAX_LEN_FNAM) addWwallFile, addSwallFile
119        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile
120        CHARACTER*(MAX_LEN_FNAM) diffKrFile        CHARACTER*(MAX_LEN_FNAM) diffKrFile
121        CHARACTER*(MAX_LEN_FNAM) viscAhDfile        CHARACTER*(MAX_LEN_FNAM) viscAhDfile
# Line 133  C     the_run_name    :: string identify Line 134  C     the_run_name    :: string identify
134        CHARACTER*(MAX_LEN_FNAM) uVelInitFile        CHARACTER*(MAX_LEN_FNAM) uVelInitFile
135        CHARACTER*(MAX_LEN_FNAM) vVelInitFile        CHARACTER*(MAX_LEN_FNAM) vVelInitFile
136        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile
137        CHARACTER*(MAX_LEN_FNAM) dQdTfile        CHARACTER*(MAX_LEN_FNAM) pLoadFile
138        CHARACTER*(MAX_LEN_FNAM) ploadFile        CHARACTER*(MAX_LEN_FNAM) addMassFile
139        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile
140        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile
141        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile
# Line 148  C     cg2dChkResFreq      :: Frequency w Line 149  C     cg2dChkResFreq      :: Frequency w
149  C                            in con. grad solver.  C                            in con. grad solver.
150  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner
151  C                            (non-linear free-surf.)  C                            (non-linear free-surf.)
152    C     cg2dUseMinResSol    :: =0 : use last-iteration/converged solution
153    C                            =1 : use solver minimum-residual solution
154  C     cg3dMaxIters        :: Maximum number of iterations in the  C     cg3dMaxIters        :: Maximum number of iterations in the
155  C                            three-dimensional con. grad solver.  C                            three-dimensional con. grad solver.
156  C     cg3dChkResFreq      :: Frequency with which to check residual  C     cg3dChkResFreq      :: Frequency with which to check residual
# Line 189  C-    debugLevel          :: controls pr Line 192  C-    debugLevel          :: controls pr
192  C                            and statistics ; higher -> more writing  C                            and statistics ; higher -> more writing
193    
194        COMMON /PARM_I/        COMMON /PARM_I/
195       &        cg2dMaxIters, cg2dChkResFreq, cg2dPreCondFreq,       &        cg2dMaxIters, cg2dChkResFreq,
196         &        cg2dPreCondFreq, cg2dUseMinResSol,
197       &        cg3dMaxIters, cg3dChkResFreq,       &        cg3dMaxIters, cg3dChkResFreq,
198       &        printResidualFreq,       &        printResidualFreq,
199       &        nIter0, nTimeSteps, nEndIter,       &        nIter0, nTimeSteps, nEndIter,
# Line 208  C                            and statist Line 212  C                            and statist
212        INTEGER cg2dMaxIters        INTEGER cg2dMaxIters
213        INTEGER cg2dChkResFreq        INTEGER cg2dChkResFreq
214        INTEGER cg2dPreCondFreq        INTEGER cg2dPreCondFreq
215          INTEGER cg2dUseMinResSol
216        INTEGER cg3dMaxIters        INTEGER cg3dMaxIters
217        INTEGER cg3dChkResFreq        INTEGER cg3dChkResFreq
218        INTEGER printResidualFreq        INTEGER printResidualFreq
# Line 241  C     usingPCoords     :: Set to indicat Line 246  C     usingPCoords     :: Set to indicat
246  C                         type coordinate (p or p*).  C                         type coordinate (p or p*).
247  C     usingZCoords     :: Set to indicate that we are working in a height  C     usingZCoords     :: Set to indicate that we are working in a height
248  C                         type coordinate (z or z*)  C                         type coordinate (z or z*)
249  C     useDynP_inEos_Zc   :: use the dynamical pressure in EOS (with Z-coord.)  C     useDynP_inEos_Zc :: use the dynamical pressure in EOS (with Z-coord.)
250  C                           this requires specific code for restart & exchange  C                         this requires specific code for restart & exchange
251  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian
252  C                           coordinate frame.  C                           coordinate frame.
253  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a
254  C                                spherical polar frame.  C                                spherical polar frame.
255  C     rotateGrid      :: rotate grid coordinates to geographical coordinates  C     rotateGrid      :: rotate grid coordinates to geographical coordinates
256  C                        according to Euler angles phiEuler, thetaEuler, psiEuler  C                        according to Euler angles phiEuler, thetaEuler, psiEuler
 C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)  
257  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical
258    C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)
259    C     hasWetCSCorners :: domain contains CS-type corners where dynamics is solved
260  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)
261  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)
262  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)
263  C- Momentum params:  C- Momentum params:
264  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.
265  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.
266    C     useSmag3D      :: Use isotropic 3-D Smagorinsky
267  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable
268  C                       on irregular grids)  C                       on irregular grids)
269  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms
# Line 284  C     upwindShear        :: use 1rst ord Line 291  C     upwindShear        :: use 1rst ord
291  C     momStepping    :: Turns momentum equation time-stepping off  C     momStepping    :: Turns momentum equation time-stepping off
292  C     calc_wVelocity :: Turns of vertical velocity calculation off  C     calc_wVelocity :: Turns of vertical velocity calculation off
293  C- Temp. & Salt params:  C- Temp. & Salt params:
294  C     tempStepping   :: Turns temperature equation time-stepping off  C     tempStepping   :: Turns temperature equation time-stepping on/off
295  C     saltStepping   :: Turns salinity equation time-stepping off  C     saltStepping   :: Turns salinity equation time-stepping on/off
296    C     addFrictionHeating :: account for frictional heating
297  C     tempAdvection  :: Flag which turns advection of temperature on and off.  C     tempAdvection  :: Flag which turns advection of temperature on and off.
298  C     tempVertDiff4  :: use vertical bi-harmonic diffusion for temperature  C     tempVertDiff4  :: use vertical bi-harmonic diffusion for temperature
299  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer
300  C     tempForcing    :: Flag which turns external forcing of temperature on  C     tempForcing    :: Flag which turns external forcing of temperature on/off
 C                       and off.  
301  C     saltAdvection  :: Flag which turns advection of salinity on and off.  C     saltAdvection  :: Flag which turns advection of salinity on and off.
302  C     saltVertDiff4  :: use vertical bi-harmonic diffusion for salinity  C     saltVertDiff4  :: use vertical bi-harmonic diffusion for salinity
303  C     saltIsActiveTr :: Salinity  is a dynamically active tracer  C     saltIsActiveTr :: Salinity  is a dynamically active tracer
304  C     saltForcing    :: Flag which turns external forcing of salinity on  C     saltForcing    :: Flag which turns external forcing of salinity on/off
 C                       and off.  
305  C     maskIniTemp    :: apply mask to initial Pot.Temp.  C     maskIniTemp    :: apply mask to initial Pot.Temp.
306  C     maskIniSalt    :: apply mask to initial salinity  C     maskIniSalt    :: apply mask to initial salinity
307  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.
# Line 341  C     doThetaClimRelax :: Set true if re Line 347  C     doThetaClimRelax :: Set true if re
347  C                        climatology is required.  C                        climatology is required.
348  C     doSaltClimRelax  :: Set true if relaxation to salinity  C     doSaltClimRelax  :: Set true if relaxation to salinity
349  C                        climatology is required.  C                        climatology is required.
350    C     balanceThetaClimRelax :: substract global mean effect at every time step
351    C     balanceSaltClimRelax :: substract global mean effect at every time step
352  C     allowFreezing  :: Allows surface water to freeze and form ice  C     allowFreezing  :: Allows surface water to freeze and form ice
 C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)  
353  C     periodicExternalForcing :: Set true if forcing is time-dependant  C     periodicExternalForcing :: Set true if forcing is time-dependant
354  C- I/O parameters -  C- I/O parameters -
355  C     globalFiles    :: Selects between "global" and "tiled" files.  C     globalFiles    :: Selects between "global" and "tiled" files.
# Line 368  C     printDomain     :: controls printi Line 375  C     printDomain     :: controls printi
375       & fluidIsAir, fluidIsWater,       & fluidIsAir, fluidIsWater,
376       & usingPCoords, usingZCoords, useDynP_inEos_Zc,       & usingPCoords, usingZCoords, useDynP_inEos_Zc,
377       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,
378       & usingCurvilinearGrid, usingCylindricalGrid,       & usingCylindricalGrid, usingCurvilinearGrid, hasWetCSCorners,
379       & deepAtmosphere, setInterFDr, setCenterDr,       & deepAtmosphere, setInterFDr, setCenterDr,
380       & no_slip_sides, no_slip_bottom,       & no_slip_sides, no_slip_bottom, useSmag3D,
381       & useFullLeith, useStrainTensionVisc, useAreaViscLength,       & useFullLeith, useStrainTensionVisc, useAreaViscLength,
382       & momViscosity, momAdvection, momForcing,       & momViscosity, momAdvection, momForcing,
383       & momPressureForcing, metricTerms, useNHMTerms,       & momPressureForcing, metricTerms, useNHMTerms,
# Line 380  C     printDomain     :: controls printi Line 387  C     printDomain     :: controls printi
387       & upwindVorticity, highOrderVorticity,       & upwindVorticity, highOrderVorticity,
388       & useAbsVorticity, upwindShear,       & useAbsVorticity, upwindShear,
389       & momStepping, calc_wVelocity, tempStepping, saltStepping,       & momStepping, calc_wVelocity, tempStepping, saltStepping,
390         & addFrictionHeating,
391       & tempAdvection, tempVertDiff4, tempIsActiveTr, tempForcing,       & tempAdvection, tempVertDiff4, tempIsActiveTr, tempForcing,
392       & saltAdvection, saltVertDiff4, saltIsActiveTr, saltForcing,       & saltAdvection, saltVertDiff4, saltIsActiveTr, saltForcing,
393       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,
# Line 394  C     printDomain     :: controls printi Line 402  C     printDomain     :: controls printi
402       & multiDimAdvection, useMultiDimAdvec,       & multiDimAdvection, useMultiDimAdvec,
403       & momDissip_In_AB, doAB_onGtGs,       & momDissip_In_AB, doAB_onGtGs,
404       & balanceEmPmR, balanceQnet, balancePrintMean,       & balanceEmPmR, balanceQnet, balancePrintMean,
405         & balanceThetaClimRelax, balanceSaltClimRelax,
406       & doThetaClimRelax, doSaltClimRelax,       & doThetaClimRelax, doSaltClimRelax,
407       & allowFreezing, useOldFreezing,       & allowFreezing,
408       & periodicExternalForcing,       & periodicExternalForcing,
409       & globalFiles,       & globalFiles,
410       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,
# Line 403  C     printDomain     :: controls printi Line 412  C     printDomain     :: controls printi
412       & writePickupAtEnd,       & writePickupAtEnd,
413       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
414       & outputTypesInclusive, dumpInitAndLast,       & outputTypesInclusive, dumpInitAndLast,
415       & printDomain,       & printDomain
      & inAdMode, inAdTrue, inAdFalse, inAdExact  
416    
417        LOGICAL fluidIsAir        LOGICAL fluidIsAir
418        LOGICAL fluidIsWater        LOGICAL fluidIsWater
# Line 414  C     printDomain     :: controls printi Line 422  C     printDomain     :: controls printi
422        LOGICAL usingCartesianGrid        LOGICAL usingCartesianGrid
423        LOGICAL usingSphericalPolarGrid, rotateGrid        LOGICAL usingSphericalPolarGrid, rotateGrid
424        LOGICAL usingCylindricalGrid        LOGICAL usingCylindricalGrid
425        LOGICAL usingCurvilinearGrid        LOGICAL usingCurvilinearGrid, hasWetCSCorners
426        LOGICAL deepAtmosphere        LOGICAL deepAtmosphere
427        LOGICAL setInterFDr        LOGICAL setInterFDr
428        LOGICAL setCenterDr        LOGICAL setCenterDr
429        LOGICAL useNHMTerms  
430        LOGICAL no_slip_sides        LOGICAL no_slip_sides
431        LOGICAL no_slip_bottom        LOGICAL no_slip_bottom
432          LOGICAL useSmag3D
433        LOGICAL useFullLeith        LOGICAL useFullLeith
434        LOGICAL useStrainTensionVisc        LOGICAL useStrainTensionVisc
435        LOGICAL useAreaViscLength        LOGICAL useAreaViscLength
# Line 428  C     printDomain     :: controls printi Line 437  C     printDomain     :: controls printi
437        LOGICAL momAdvection        LOGICAL momAdvection
438        LOGICAL momForcing        LOGICAL momForcing
439        LOGICAL momPressureForcing        LOGICAL momPressureForcing
440          LOGICAL metricTerms
441          LOGICAL useNHMTerms
442    
443        LOGICAL useCoriolis        LOGICAL useCoriolis
444          LOGICAL use3dCoriolis
445          LOGICAL useCDscheme
446        LOGICAL vectorInvariantMomentum        LOGICAL vectorInvariantMomentum
447          LOGICAL useEnergyConservingCoriolis
448          LOGICAL useJamartWetPoints
449          LOGICAL useJamartMomAdv
450          LOGICAL upwindVorticity
451          LOGICAL highOrderVorticity
452          LOGICAL useAbsVorticity
453          LOGICAL upwindShear
454          LOGICAL momStepping
455          LOGICAL calc_wVelocity
456          LOGICAL tempStepping
457          LOGICAL saltStepping
458          LOGICAL addFrictionHeating
459        LOGICAL tempAdvection        LOGICAL tempAdvection
460        LOGICAL tempVertDiff4        LOGICAL tempVertDiff4
461        LOGICAL tempIsActiveTr        LOGICAL tempIsActiveTr
# Line 456  C     printDomain     :: controls printi Line 482  C     printDomain     :: controls printi
482        LOGICAL implicitIntGravWave        LOGICAL implicitIntGravWave
483        LOGICAL staggerTimeStep        LOGICAL staggerTimeStep
484        LOGICAL doResetHFactors        LOGICAL doResetHFactors
       LOGICAL momStepping  
       LOGICAL calc_wVelocity  
       LOGICAL tempStepping  
       LOGICAL saltStepping  
       LOGICAL metricTerms  
       LOGICAL use3dCoriolis  
       LOGICAL useCDscheme  
       LOGICAL useEnergyConservingCoriolis  
       LOGICAL useJamartWetPoints  
       LOGICAL useJamartMomAdv  
       LOGICAL upwindVorticity  
       LOGICAL highOrderVorticity  
       LOGICAL useAbsVorticity  
       LOGICAL upwindShear  
485        LOGICAL implicitDiffusion        LOGICAL implicitDiffusion
486        LOGICAL implicitViscosity        LOGICAL implicitViscosity
487        LOGICAL tempImplVertAdv        LOGICAL tempImplVertAdv
# Line 484  C     printDomain     :: controls printi Line 496  C     printDomain     :: controls printi
496        LOGICAL balancePrintMean        LOGICAL balancePrintMean
497        LOGICAL doThetaClimRelax        LOGICAL doThetaClimRelax
498        LOGICAL doSaltClimRelax        LOGICAL doSaltClimRelax
499          LOGICAL balanceThetaClimRelax
500          LOGICAL balanceSaltClimRelax
501        LOGICAL allowFreezing        LOGICAL allowFreezing
       LOGICAL useOldFreezing  
502        LOGICAL periodicExternalForcing        LOGICAL periodicExternalForcing
503        LOGICAL globalFiles        LOGICAL globalFiles
504        LOGICAL pickupStrictlyMatch        LOGICAL pickupStrictlyMatch
# Line 497  C     printDomain     :: controls printi Line 510  C     printDomain     :: controls printi
510        LOGICAL outputTypesInclusive        LOGICAL outputTypesInclusive
511        LOGICAL dumpInitAndLast        LOGICAL dumpInitAndLast
512        LOGICAL printDomain        LOGICAL printDomain
       LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact  
513    
514  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
515  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 529  C                :: most cell face (Lat- Line 541  C                :: most cell face (Lat-
541  C                :: parameter but it makes geographical references simple.)  C                :: parameter but it makes geographical references simple.)
542  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern
543  C                :: most face (Lat-Lon grid).  C                :: most face (Lat-Lon grid).
544  C     gravity   :: Accel. due to gravity ( m/s^2 )  C     gravity    :: Accel. due to gravity ( m/s^2 )
545  C     recip_gravity and its inverse  C     recip_gravity and its inverse
546  C     gBaro     :: Accel. due to gravity used in barotropic equation ( m/s^2 )  C     gBaro      :: Accel. due to gravity used in barotropic equation ( m/s^2 )
547  C     rhoNil    :: Reference density for the linear equation of state  C     rhoNil     :: Reference density for the linear equation of state
548  C     rhoConst  :: Vertically constant reference density (Boussinesq)  C     rhoConst   :: Vertically constant reference density (Boussinesq)
549  C     rhoFacC   :: normalized (by rhoConst) reference density at cell-Center  C     thetaConst :: Constant reference for potential temperature
550  C     rhoFacF   :: normalized (by rhoConst) reference density at cell-interFace  C     rhoFacC    :: normalized (by rhoConst) reference density at cell-Center
551    C     rhoFacF    :: normalized (by rhoConst) reference density at cell-interFace
552  C     rhoConstFresh :: Constant reference density for fresh water (rain)  C     rhoConstFresh :: Constant reference density for fresh water (rain)
553  C     rho1Ref   :: reference vertical profile for density  C     rho1Ref    :: reference vertical profile for density
554  C     tRef      :: reference vertical profile for potential temperature  C     tRef       :: reference vertical profile for potential temperature
555  C     sRef      :: reference vertical profile for salinity/specific humidity  C     sRef       :: reference vertical profile for salinity/specific humidity
556  C     phiRef    :: reference potential (pressure/rho, geopotential) profile  C     phiRef     :: reference potential (pressure/rho, geopotential) profile
557  C     dBdrRef   :: vertical gradient of reference buoyancy  [(m/s/r)^2]:  C     dBdrRef    :: vertical gradient of reference buoyancy  [(m/s/r)^2]:
558  C               :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]  C                :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]
559  C               :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]  C                :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]
560  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),
561  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].
562  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit
# Line 574  C     viscAh     :: Eddy viscosity coeff Line 587  C     viscAh     :: Eddy viscosity coeff
587  C                   momentum laterally ( m^2/s )  C                   momentum laterally ( m^2/s )
588  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical
589  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
590  C                   model, defaults to viscAh if unset ( m^2/s )  C                   model, defaults to viscAhD if unset ( m^2/s )
591  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
592  C     viscA4     :: Biharmonic viscosity coeff. for mixing of  C     viscA4     :: Biharmonic viscosity coeff. for mixing of
593  C                   momentum laterally ( m^4/s )  C                   momentum laterally ( m^4/s )
594  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical
595  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
596  C                   model, defaults to viscA4 if unset ( m^2/s )  C                   model, defaults to viscA4D if unset ( m^2/s )
597  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
598  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally
599  C                   (act on Divergence part) ( m^2/s )  C                   (act on Divergence part) ( m^2/s )
# Line 590  C     viscA4D    :: Biharmonic viscosity Line 603  C     viscA4D    :: Biharmonic viscosity
603  C                   (act on Divergence part) ( m^4/s )  C                   (act on Divergence part) ( m^4/s )
604  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally
605  C                   (act on Vorticity  part) ( m^4/s )  C                   (act on Vorticity  part) ( m^4/s )
606    C     smag3D_coeff :: Isotropic 3-D Smagorinsky coefficient (-)
607  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))
608  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))
609  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))
# Line 645  C                    Frequency of checkp Line 659  C                    Frequency of checkp
659  C                    are referenced to this clock. ( s )  C                    are referenced to this clock. ( s )
660  C     deltaTMom    :: Timestep for momemtum equations ( s )  C     deltaTMom    :: Timestep for momemtum equations ( s )
661  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k
662  C     deltaTfreesurf :: Timestep for free-surface equation ( s )  C     deltaTFreeSurf :: Timestep for free-surface equation ( s )
663  C     freeSurfFac  :: Parameter to turn implicit free surface term on or off  C     freeSurfFac  :: Parameter to turn implicit free surface term on or off
664  C                     freeSurFac = 1. uses implicit free surface  C                     freeSurFac = 1. uses implicit free surface
665  C                     freeSurFac = 0. uses rigid lid  C                     freeSurFac = 0. uses rigid lid
# Line 724  C                           is to be rep Line 738  C                           is to be rep
738  C                           (affects myabs, mymin, mymax)  C                           (affects myabs, mymin, mymax)
739  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales
740  C                      (i.e. allows convection at different Rayleigh numbers)  C                      (i.e. allows convection at different Rayleigh numbers)
741    C     tCylIn        :: Temperature of the cylinder inner boundary
742    C     tCylOut       :: Temperature of the cylinder outer boundary
743  C     phiEuler      :: Euler angle, rotation about original z-axis  C     phiEuler      :: Euler angle, rotation about original z-axis
744  C     thetaEuler    :: Euler angle, rotation about new x-axis  C     thetaEuler    :: Euler angle, rotation about new x-axis
745  C     psiEuler      :: Euler angle, rotation about new z-axis  C     psiEuler      :: Euler angle, rotation about new z-axis
746        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,
747       & cg2dpcOffDFac, cg3dTargetResidual,       & cg2dpcOffDFac, cg3dTargetResidual,
748       & delR, delRc, xgOrigin, ygOrigin,       & delR, delRc, xgOrigin, ygOrigin,
749       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,       & deltaT, deltaTMom, dTtracerLev, deltaTFreeSurf, deltaTClock,
750       & abEps, alph_AB, beta_AB,       & abEps, alph_AB, beta_AB,
751       & rSphere, recip_rSphere, radius_fromHorizGrid,       & rSphere, recip_rSphere, radius_fromHorizGrid,
752       & f0, beta, fPrime, omega, rotationPeriod,       & f0, beta, fPrime, omega, rotationPeriod,
753       & viscFacAdj, viscAh, viscAhW, viscAhMax,       & viscFacAdj, viscAh, viscAhW, smag3D_coeff,
754       & viscAhGrid, viscAhGridMax, viscAhGridMin,       & viscAhMax, viscAhGrid, viscAhGridMax, viscAhGridMin,
755       & viscC2leith, viscC2leithD,       & viscC2leith, viscC2leithD,
756       & viscC2smag, viscC4smag,       & viscC2smag, viscC4smag,
757       & viscAhD, viscAhZ, viscA4D, viscA4Z,       & viscAhD, viscAhZ, viscA4D, viscA4Z,
# Line 752  C     psiEuler      :: Euler angle, rota Line 768  C     psiEuler      :: Euler angle, rota
768       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,
769       & hFacMin, hFacMinDz, hFacInf, hFacSup,       & hFacMin, hFacMinDz, hFacInf, hFacSup,
770       & gravity, recip_gravity, gBaro,       & gravity, recip_gravity, gBaro,
771       & rhoNil, rhoConst, recip_rhoConst,       & rhoNil, rhoConst, recip_rhoConst, thetaConst,
772       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,
773       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,
774       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,
# Line 782  C     psiEuler      :: Euler angle, rota Line 798  C     psiEuler      :: Euler angle, rota
798        _RL ygOrigin        _RL ygOrigin
799        _RL deltaT        _RL deltaT
800        _RL deltaTClock        _RL deltaTClock
801        _RL deltaTmom        _RL deltaTMom
802        _RL dTtracerLev(Nr)        _RL dTtracerLev(Nr)
803        _RL deltaTfreesurf        _RL deltaTFreeSurf
804        _RL abEps, alph_AB, beta_AB        _RL abEps, alph_AB, beta_AB
805        _RL rSphere        _RL rSphere
806        _RL recip_rSphere        _RL recip_rSphere
# Line 810  C     psiEuler      :: Euler angle, rota Line 826  C     psiEuler      :: Euler angle, rota
826        _RL viscAhW        _RL viscAhW
827        _RL viscAhD        _RL viscAhD
828        _RL viscAhZ        _RL viscAhZ
829          _RL smag3D_coeff
830        _RL viscAhMax        _RL viscAhMax
831        _RL viscAhReMax        _RL viscAhReMax
832        _RL viscAhGrid, viscAhGridMax, viscAhGridMin        _RL viscAhGrid, viscAhGridMax, viscAhGridMin
# Line 849  C     psiEuler      :: Euler angle, rota Line 866  C     psiEuler      :: Euler angle, rota
866        _RL gBaro        _RL gBaro
867        _RL rhoNil        _RL rhoNil
868        _RL rhoConst,      recip_rhoConst        _RL rhoConst,      recip_rhoConst
869          _RL thetaConst
870        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)
871        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)
872        _RL rhoConstFresh        _RL rhoConstFresh
# Line 900  C     psiEuler      :: Euler angle, rota Line 918  C     psiEuler      :: Euler angle, rota
918        _RL bottomDragQuadratic        _RL bottomDragQuadratic
919        _RL smoothAbsFuncRange        _RL smoothAbsFuncRange
920        _RL nh_Am2        _RL nh_Am2
921        _RL tCylIn        _RL tCylIn, tCylOut
       _RL tCylOut  
922        _RL phiEuler, thetaEuler, psiEuler        _RL phiEuler, thetaEuler, psiEuler
923    
924  C--   COMMON /PARM_A/ Thermodynamics constants ?  C--   COMMON /PARM_A/ Thermodynamics constants ?
925        COMMON /PARM_A/ HeatCapacity_Cp,recip_Cp        COMMON /PARM_A/ HeatCapacity_Cp
926        _RL HeatCapacity_Cp        _RL HeatCapacity_Cp
       _RL recip_Cp  
927    
928  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)
929  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin
# Line 965  C Logical flags for selecting packages Line 981  C Logical flags for selecting packages
981        LOGICAL useStreamIce        LOGICAL useStreamIce
982        LOGICAL useICEFRONT        LOGICAL useICEFRONT
983        LOGICAL useThSIce        LOGICAL useThSIce
984          LOGICAL useLand
985        LOGICAL useATM2d        LOGICAL useATM2d
986        LOGICAL useAIM        LOGICAL useAIM
987        LOGICAL useLand        LOGICAL useAtm_Phys
988        LOGICAL useFizhi        LOGICAL useFizhi
989        LOGICAL useGridAlt        LOGICAL useGridAlt
990        LOGICAL useDiagnostics        LOGICAL useDiagnostics
# Line 985  C Logical flags for selecting packages Line 1002  C Logical flags for selecting packages
1002       &        useGrdchk,useSMOOTH,usePROFILES,useECCO,useSBO, useFLT,       &        useGrdchk,useSMOOTH,usePROFILES,useECCO,useSBO, useFLT,
1003       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,
1004       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,
1005       &        useStreamIce, useICEFRONT, useThSIce,       &        useStreamIce, useICEFRONT, useThSIce, useLand,
1006       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,       &        useATM2D, useAIM, useAtm_Phys, useFizhi, useGridAlt,
1007       &        useDiagnostics, useREGRID, useLayers, useMNC,       &        useDiagnostics, useREGRID, useLayers, useMNC,
1008       &        useRunClock, useEMBED_FILES,       &        useRunClock, useEMBED_FILES,
1009       &        useMYPACKAGE       &        useMYPACKAGE
1010    
 C     Logical flags for turning off parts of the code in adjoint mode  
       LOGICAL useKPPinAdMode, useKPPinFwdMode  
       LOGICAL useGMrediInAdMode, useGMrediInFwdMode  
       LOGICAL useSEAICEinAdMode, useSEAICEinFwdMode  
       COMMON /PARM_PACKAGES_ADJ/  
      &       useKPPinAdMode, useKPPinFwdMode,  
      &       useGMrediInAdMode, useGMrediInFwdMode,  
      &       useSEAICEinAdMode, useSEAICEinFwdMode  
   
1011  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
1012  CEH3 ;;; mode:fortran ***  CEH3 ;;; mode:fortran ***
1013  CEH3 ;;; End: ***  CEH3 ;;; End: ***
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