/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.239 by jmc, Sat Sep 11 21:23:08 2010 UTC revision 1.262 by gforget, Fri Jun 22 02:03:02 2012 UTC
# Line 33  C     pickupSuff      :: force to start Line 33  C     pickupSuff      :: force to start
33  C                        and read pickup files with this suffix (max 10 Char.)  C                        and read pickup files with this suffix (max 10 Char.)
34  C     mdsioLocalDir   :: read-write tiled file from/to this directory name  C     mdsioLocalDir   :: read-write tiled file from/to this directory name
35  C                        (+ 4 digits Processor-Rank) instead of current dir.  C                        (+ 4 digits Processor-Rank) instead of current dir.
36    C     adTapeDir       :: read-write checkpointing tape files from/to this
37    C                        directory name instead of current dir. Conflicts
38    C                        mdsioLocalDir, so only one of the two can be set.
39    C                        In contrast to mdsioLocalDir, if specified adTapeDir
40    C                        must exist before the model starts.
41  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)
42  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)
43  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)
# Line 59  C     viscA4Zfile     :: File containing Line 64  C     viscA4Zfile     :: File containing
64  C     zonalWindFile   :: File containing zonal wind data  C     zonalWindFile   :: File containing zonal wind data
65  C     meridWindFile   :: File containing meridional wind data  C     meridWindFile   :: File containing meridional wind data
66  C     thetaClimFile   :: File containing surface theta climataology used  C     thetaClimFile   :: File containing surface theta climataology used
67  C                       in relaxation term -lambda(theta-theta*)  C                        in relaxation term -lambda(theta-theta*)
68  C     saltClimFile    :: File containing surface salt climataology used  C     saltClimFile    :: File containing surface salt climataology used
69  C                       in relaxation term -lambda(salt-salt*)  C                        in relaxation term -lambda(salt-salt*)
70  C     surfQfile       :: File containing surface heat flux, excluding SW  C     surfQfile       :: File containing surface heat flux, excluding SW
71  C                        (old version, kept for backward compatibility)  C                        (old version, kept for backward compatibility)
72  C     surfQnetFile    :: File containing surface net heat flux  C     surfQnetFile    :: File containing surface net heat flux
# Line 78  C     eddyPsiYFile    :: File containing Line 83  C     eddyPsiYFile    :: File containing
83  C     the_run_name    :: string identifying the name of the model "run"  C     the_run_name    :: string identifying the name of the model "run"
84        COMMON /PARM_C/        COMMON /PARM_C/
85       &                buoyancyRelation, eosType,       &                buoyancyRelation, eosType,
86       &                pickupSuff, mdsioLocalDir,       &                pickupSuff, mdsioLocalDir, adTapeDir,
87       &                tRefFile, sRefFile, rhoRefFile,       &                tRefFile, sRefFile, rhoRefFile,
88       &                delRFile, delRcFile, hybSigmFile,       &                delRFile, delRcFile, hybSigmFile,
89       &                delXFile, delYFile, horizGridFile,       &                delXFile, delYFile, horizGridFile,
# Line 99  C     the_run_name    :: string identify Line 104  C     the_run_name    :: string identify
104        CHARACTER*(6)  eosType        CHARACTER*(6)  eosType
105        CHARACTER*(10) pickupSuff        CHARACTER*(10) pickupSuff
106        CHARACTER*(MAX_LEN_FNAM) mdsioLocalDir        CHARACTER*(MAX_LEN_FNAM) mdsioLocalDir
107          CHARACTER*(MAX_LEN_FNAM) adTapeDir
108        CHARACTER*(MAX_LEN_FNAM) tRefFile        CHARACTER*(MAX_LEN_FNAM) tRefFile
109        CHARACTER*(MAX_LEN_FNAM) sRefFile        CHARACTER*(MAX_LEN_FNAM) sRefFile
110        CHARACTER*(MAX_LEN_FNAM) rhoRefFile        CHARACTER*(MAX_LEN_FNAM) rhoRefFile
# Line 137  C     the_run_name    :: string identify Line 143  C     the_run_name    :: string identify
143    
144  C--   COMMON /PARM_I/ Integer valued parameters used by the model.  C--   COMMON /PARM_I/ Integer valued parameters used by the model.
145  C     cg2dMaxIters        :: Maximum number of iterations in the  C     cg2dMaxIters        :: Maximum number of iterations in the
146  C                           two-dimensional con. grad solver.  C                            two-dimensional con. grad solver.
147  C     cg2dChkResFreq      :: Frequency with which to check residual  C     cg2dChkResFreq      :: Frequency with which to check residual
148  C                           in con. grad solver.  C                            in con. grad solver.
149  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner
150  C                            (non-linear free-surf.)  C                            (non-linear free-surf.)
151  C     cg3dMaxIters        :: Maximum number of iterations in the  C     cg3dMaxIters        :: Maximum number of iterations in the
152  C                           three-dimensional con. grad solver.  C                            three-dimensional con. grad solver.
153  C     cg3dChkResFreq      :: Frequency with which to check residual  C     cg3dChkResFreq      :: Frequency with which to check residual
154  C                           in con. grad solver.  C                            in con. grad solver.
155    C     printResidualFreq   :: Frequency for printing residual in CG iterations
156  C     nIter0              :: Start time-step number of for this run  C     nIter0              :: Start time-step number of for this run
157  C     nTimeSteps          :: Number of timesteps to execute  C     nTimeSteps          :: Number of timesteps to execute
158  C     writeStatePrec      :: Precision used for writing model state.  C     writeStatePrec      :: Precision used for writing model state.
159  C     writeBinaryPrec     :: Precision used for writing binary files  C     writeBinaryPrec     :: Precision used for writing binary files
160  C     readBinaryPrec      :: Precision used for reading binary files  C     readBinaryPrec      :: Precision used for reading binary files
161    C     selectCoriMap       :: select setting of Coriolis parameter map:
162    C                           =0 f-Plane (Constant Coriolis, = f0)
163    C                           =1 Beta-Plane Coriolis (= f0 + beta.y)
164    C                           =2 Spherical Coriolis (= 2.omega.sin(phi))
165    C                           =3 Read Coriolis 2-d fields from files.
166    C     selectSigmaCoord    :: option related to sigma vertical coordinate
167  C     nonlinFreeSurf      :: option related to non-linear free surface  C     nonlinFreeSurf      :: option related to non-linear free surface
168  C                           =0 Linear free surface ; >0 Non-linear  C                           =0 Linear free surface ; >0 Non-linear
169  C     select_rStar        :: option related to r* vertical coordinate  C     select_rStar        :: option related to r* vertical coordinate
170  C                           =0 (default) use r coord. ; > 0 use r*  C                           =0 (default) use r coord. ; > 0 use r*
171  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:
172  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.
 C     selectSigmaCoord    :: option related to sigma vertical coordinate  
173  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior
174  C                            (3-D generalisation of oceanic real-fresh water flux)  C                            (3-D generalisation of oceanic real-fresh water flux)
175  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)
176  C     momForcingOutAB     :: =1: take momentum forcing contribution  C     momForcingOutAB     :: =1: take momentum forcing contribution
177  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
178  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution
179  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
180  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector
181  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector
182  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector
# Line 173  C     selectKEscheme      :: Kinetic Ene Line 185  C     selectKEscheme      :: Kinetic Ene
185  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)
186  C     monitorSelect       :: select group of variables to monitor  C     monitorSelect       :: select group of variables to monitor
187  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface
188  C     debugLevel          :: debug level selector: higher -> more writing  C-    debugLevel          :: controls printing of algorithm intermediate results
189    C                            and statistics ; higher -> more writing
190    
191        COMMON /PARM_I/        COMMON /PARM_I/
192       &        cg2dMaxIters,       &        cg2dMaxIters, cg2dChkResFreq, cg2dPreCondFreq,
193       &        cg2dChkResFreq, cg2dPreCondFreq,       &        cg3dMaxIters, cg3dChkResFreq,
194       &        cg3dMaxIters,       &        printResidualFreq,
      &        cg3dChkResFreq,  
195       &        nIter0, nTimeSteps, nEndIter,       &        nIter0, nTimeSteps, nEndIter,
196       &        writeStatePrec,       &        writeStatePrec,
197       &        writeBinaryPrec, readBinaryPrec,       &        writeBinaryPrec, readBinaryPrec,
198         &        selectCoriMap,
199         &        selectSigmaCoord,
200       &        nonlinFreeSurf, select_rStar,       &        nonlinFreeSurf, select_rStar,
201       &        selectNHfreeSurf,       &        selectNHfreeSurf,
      &        selectSigmaCoord,  
202       &        selectAddFluid,       &        selectAddFluid,
203       &        momForcingOutAB, tracForcingOutAB,       &        momForcingOutAB, tracForcingOutAB,
204       &        tempAdvScheme, tempVertAdvScheme,       &        tempAdvScheme, tempVertAdvScheme,
# Line 197  C     debugLevel          :: debug level Line 210  C     debugLevel          :: debug level
210        INTEGER cg2dPreCondFreq        INTEGER cg2dPreCondFreq
211        INTEGER cg3dMaxIters        INTEGER cg3dMaxIters
212        INTEGER cg3dChkResFreq        INTEGER cg3dChkResFreq
213          INTEGER printResidualFreq
214        INTEGER nIter0        INTEGER nIter0
215        INTEGER nTimeSteps        INTEGER nTimeSteps
216        INTEGER nEndIter        INTEGER nEndIter
217        INTEGER writeStatePrec        INTEGER writeStatePrec
218        INTEGER writeBinaryPrec        INTEGER writeBinaryPrec
219        INTEGER readBinaryPrec        INTEGER readBinaryPrec
220          INTEGER selectCoriMap
221          INTEGER selectSigmaCoord
222        INTEGER nonlinFreeSurf        INTEGER nonlinFreeSurf
223        INTEGER select_rStar        INTEGER select_rStar
224        INTEGER selectNHfreeSurf        INTEGER selectNHfreeSurf
       INTEGER selectSigmaCoord  
225        INTEGER selectAddFluid        INTEGER selectAddFluid
226        INTEGER momForcingOutAB, tracForcingOutAB        INTEGER momForcingOutAB, tracForcingOutAB
227        INTEGER tempAdvScheme, tempVertAdvScheme        INTEGER tempAdvScheme, tempVertAdvScheme
# Line 219  C     debugLevel          :: debug level Line 234  C     debugLevel          :: debug level
234  C--   COMMON /PARM_L/ Logical valued parameters used by the model.  C--   COMMON /PARM_L/ Logical valued parameters used by the model.
235  C- Coordinate + Grid params:  C- Coordinate + Grid params:
236  C     fluidIsAir       :: Set to indicate that the fluid major constituent  C     fluidIsAir       :: Set to indicate that the fluid major constituent
237  C                        is air  C                         is air
238  C     fluidIsWater     :: Set to indicate that the fluid major constituent  C     fluidIsWater     :: Set to indicate that the fluid major constituent
239  C                        is water  C                         is water
240  C     usingPCoords     :: Set to indicate that we are working in a pressure  C     usingPCoords     :: Set to indicate that we are working in a pressure
241  C                        type coordinate (p or p*).  C                         type coordinate (p or p*).
242  C     usingZCoords     :: Set to indicate that we are working in a height  C     usingZCoords     :: Set to indicate that we are working in a height
243  C                        type coordinate (z or z*)  C                         type coordinate (z or z*)
244  C     useDynP_inEos_Zc :: use the dynamical pressure in EOS (with Z-coord.)  C     useDynP_inEos_Zc   :: use the dynamical pressure in EOS (with Z-coord.)
245  C                         this requires specific code for restart & exchange  C                           this requires specific code for restart & exchange
246  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian
247  C                          coordinate frame.  C                           coordinate frame.
248  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a
249  C                               spherical polar frame.  C                                spherical polar frame.
250  C     rotateGrid      :: rotate grid coordinates to geographical coordinates  C     rotateGrid      :: rotate grid coordinates to geographical coordinates
251  C                        according to Euler angles phiEuler, thetaEuler, psiEuler  C                        according to Euler angles phiEuler, thetaEuler, psiEuler
252  C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)  C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)
# Line 257  C     metricTerms   :: Flag which turns Line 272  C     metricTerms   :: Flag which turns
272  C     useNHMTerms   :: If TRUE use non-hydrostatic metric terms.  C     useNHMTerms   :: If TRUE use non-hydrostatic metric terms.
273  C     useCoriolis   :: Flag which turns the coriolis terms on and off.  C     useCoriolis   :: Flag which turns the coriolis terms on and off.
274  C     use3dCoriolis :: Turns the 3-D coriolis terms (in Omega.cos Phi) on - off  C     use3dCoriolis :: Turns the 3-D coriolis terms (in Omega.cos Phi) on - off
 C     useConstantF  :: Coriolis parameter set to f0  
 C     useBetaPlaneF :: Coriolis parameter set to f0 + beta.y  
 C     useSphereF    :: Coriolis parameter set to 2.omega.sin(phi)  
275  C     useCDscheme   :: use CD-scheme to calculate Coriolis terms.  C     useCDscheme   :: use CD-scheme to calculate Coriolis terms.
276  C     vectorInvariantMomentum :: use Vector-Invariant form (mom_vecinv package)  C     vectorInvariantMomentum :: use Vector-Invariant form (mom_vecinv package)
277  C                                (default = F = use mom_fluxform package)  C                                (default = F = use mom_fluxform package)
# Line 270  C     highOrderVorticity :: use 3rd/4th Line 282  C     highOrderVorticity :: use 3rd/4th
282  C     useAbsVorticity :: work with f+zeta in Coriolis terms  C     useAbsVorticity :: work with f+zeta in Coriolis terms
283  C     upwindShear        :: use 1rst order upwind interp. (V.I., vertical advection)  C     upwindShear        :: use 1rst order upwind interp. (V.I., vertical advection)
284  C     momStepping    :: Turns momentum equation time-stepping off  C     momStepping    :: Turns momentum equation time-stepping off
285    C     calc_wVelocity :: Turns of vertical velocity calculation off
286  C- Temp. & Salt params:  C- Temp. & Salt params:
287  C     tempStepping   :: Turns temperature equation time-stepping off  C     tempStepping   :: Turns temperature equation time-stepping off
288  C     saltStepping   :: Turns salinity equation time-stepping off  C     saltStepping   :: Turns salinity equation time-stepping off
289  C     tempAdvection  :: Flag which turns advection of temperature on and off.  C     tempAdvection  :: Flag which turns advection of temperature on and off.
290    C     tempVertDiff4  :: use vertical bi-harmonic diffusion for temperature
291  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer
292  C     tempForcing    :: Flag which turns external forcing of temperature on  C     tempForcing    :: Flag which turns external forcing of temperature on
293  C                       and off.  C                       and off.
294  C     saltAdvection  :: Flag which turns advection of salinity on and off.  C     saltAdvection  :: Flag which turns advection of salinity on and off.
295    C     saltVertDiff4  :: use vertical bi-harmonic diffusion for salinity
296  C     saltIsActiveTr :: Salinity  is a dynamically active tracer  C     saltIsActiveTr :: Salinity  is a dynamically active tracer
297  C     saltForcing    :: Flag which turns external forcing of salinity on  C     saltForcing    :: Flag which turns external forcing of salinity on
298  C                       and off.  C                       and off.
# Line 285  C     maskIniTemp    :: apply mask to in Line 300  C     maskIniTemp    :: apply mask to in
300  C     maskIniSalt    :: apply mask to initial salinity  C     maskIniSalt    :: apply mask to initial salinity
301  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.
302  C     checkIniSalt   :: check for points with identically zero initial salinity  C     checkIniSalt   :: check for points with identically zero initial salinity
 C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux  
 C                         as a real Fresh Water (=> changes the Sea Level)  
 C                         if F, converts P+R-E to salt flux (no SL effect)  
303  C- Pressure solver related parameters (PARM02)  C- Pressure solver related parameters (PARM02)
304  C     useSRCGSolver  :: Set to true to use conjugate gradient  C     useSRCGSolver  :: Set to true to use conjugate gradient
305  C                       solver with single reduction (only one call of  C                       solver with single reduction (only one call of
306  C                       s/r mpi_allreduce), default is false  C                       s/r mpi_allreduce), default is false
307  C- Time-stepping params:  C- Time-stepping & free-surface params:
308  C     rigidLid            :: Set to true to use rigid lid  C     rigidLid            :: Set to true to use rigid lid
309  C     implicitFreeSurface :: Set to true to use implicit free surface  C     implicitFreeSurface :: Set to true to use implicit free surface
310    C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the
311    C                            linear relation Phi_surf = Bo_surf*eta
312    C     uniformFreeSurfLev  :: TRUE if free-surface level-index is uniform (=1)
313  C     exactConserv        :: Set to true to conserve exactly the total Volume  C     exactConserv        :: Set to true to conserve exactly the total Volume
314  C     linFSConserveTr     :: Set to true to correct source/sink of tracer  C     linFSConserveTr     :: Set to true to correct source/sink of tracer
315  C                            at the surface due to Linear Free Surface  C                            at the surface due to Linear Free Surface
316  C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux
317  C                            linear relation Phi_surf = Bo_surf*eta  C                         as a real Fresh Water (=> changes the Sea Level)
318    C                         if F, converts P+R-E to salt flux (no SL effect)
319  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm
320  C     nonHydrostatic   :: Using non-hydrostatic algorithm  C     nonHydrostatic   :: Using non-hydrostatic algorithm
321  C     use3Dsolver      :: set to true to use 3-D pressure solver  C     use3Dsolver      :: set to true to use 3-D pressure solver
322  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly
323  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S
324    C     doResetHFactors   :: Do reset thickness factors @ beginning of each time-step
325  C     implicitDiffusion :: Turns implicit vertical diffusion on  C     implicitDiffusion :: Turns implicit vertical diffusion on
326  C     implicitViscosity :: Turns implicit vertical viscosity on  C     implicitViscosity :: Turns implicit vertical viscosity on
327  C     tempImplVertAdv :: Turns on implicit vertical advection for Temperature  C     tempImplVertAdv :: Turns on implicit vertical advection for Temperature
# Line 345  C     snapshot_mdsio     :: use mdsio fo Line 362  C     snapshot_mdsio     :: use mdsio fo
362  C     monitor_stdio      :: use stdio for monitor output  C     monitor_stdio      :: use stdio for monitor output
363  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)
364  C                        & Last iteration, in addition multiple of dumpFreq iter.  C                        & Last iteration, in addition multiple of dumpFreq iter.
365    C     printDomain     :: controls printing of domain fields (bathy, hFac ...).
366    
367        COMMON /PARM_L/        COMMON /PARM_L/
368       & fluidIsAir, fluidIsWater,       & fluidIsAir, fluidIsWater,
# Line 357  C                        & Last iteratio Line 375  C                        & Last iteratio
375       & momViscosity, momAdvection, momForcing,       & momViscosity, momAdvection, momForcing,
376       & momPressureForcing, metricTerms, useNHMTerms,       & momPressureForcing, metricTerms, useNHMTerms,
377       & useCoriolis, use3dCoriolis,       & useCoriolis, use3dCoriolis,
      & useConstantF, useBetaPlaneF, useSphereF,  
378       & useCDscheme, vectorInvariantMomentum,       & useCDscheme, vectorInvariantMomentum,
379       & useEnergyConservingCoriolis, useJamartWetPoints, useJamartMomAdv,       & useEnergyConservingCoriolis, useJamartWetPoints, useJamartMomAdv,
380       & upwindVorticity, highOrderVorticity,       & upwindVorticity, highOrderVorticity,
381       & useAbsVorticity, upwindShear,       & useAbsVorticity, upwindShear,
382       & momStepping, tempStepping, saltStepping,       & momStepping, calc_wVelocity, tempStepping, saltStepping,
383       & tempAdvection, tempIsActiveTr, tempForcing,       & tempAdvection, tempVertDiff4, tempIsActiveTr, tempForcing,
384       & saltAdvection, saltIsActiveTr, saltForcing,       & saltAdvection, saltVertDiff4, saltIsActiveTr, saltForcing,
385       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,
386       & useRealFreshWaterFlux,       & useSRCGSolver,
387       & rigidLid, implicitFreeSurface, exactConserv, linFSConserveTr,       & rigidLid, implicitFreeSurface,
388       & uniformLin_PhiSurf,       & uniformLin_PhiSurf, uniformFreeSurfLev,
389       & quasiHydrostatic, nonHydrostatic,       & exactConserv, linFSConserveTr, useRealFreshWaterFlux,
390       & use3Dsolver, implicitIntGravWave, staggerTimeStep,       & quasiHydrostatic, nonHydrostatic, use3Dsolver,
391         & implicitIntGravWave, staggerTimeStep, doResetHFactors,
392       & implicitDiffusion, implicitViscosity,       & implicitDiffusion, implicitViscosity,
393       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,
394       & multiDimAdvection, useMultiDimAdvec,       & multiDimAdvection, useMultiDimAdvec,
# Line 384  C                        & Last iteratio Line 402  C                        & Last iteratio
402       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,
403       & writePickupAtEnd,       & writePickupAtEnd,
404       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
405       & outputTypesInclusive, dumpInitAndLast, debugMode,       & outputTypesInclusive, dumpInitAndLast,
406       & inAdMode, inAdTrue, inAdFalse, inAdExact,       & printDomain,
407       & useSRCGSolver       & inAdMode, inAdTrue, inAdFalse, inAdExact
408    
409        LOGICAL fluidIsAir        LOGICAL fluidIsAir
410        LOGICAL fluidIsWater        LOGICAL fluidIsWater
# Line 403  C                        & Last iteratio Line 421  C                        & Last iteratio
421        LOGICAL useNHMTerms        LOGICAL useNHMTerms
422        LOGICAL no_slip_sides        LOGICAL no_slip_sides
423        LOGICAL no_slip_bottom        LOGICAL no_slip_bottom
424          LOGICAL useFullLeith
425          LOGICAL useStrainTensionVisc
426          LOGICAL useAreaViscLength
427        LOGICAL momViscosity        LOGICAL momViscosity
428        LOGICAL momAdvection        LOGICAL momAdvection
429        LOGICAL momForcing        LOGICAL momForcing
# Line 410  C                        & Last iteratio Line 431  C                        & Last iteratio
431        LOGICAL useCoriolis        LOGICAL useCoriolis
432        LOGICAL vectorInvariantMomentum        LOGICAL vectorInvariantMomentum
433        LOGICAL tempAdvection        LOGICAL tempAdvection
434          LOGICAL tempVertDiff4
435        LOGICAL tempIsActiveTr        LOGICAL tempIsActiveTr
436        LOGICAL tempForcing        LOGICAL tempForcing
437        LOGICAL saltAdvection        LOGICAL saltAdvection
438          LOGICAL saltVertDiff4
439        LOGICAL saltIsActiveTr        LOGICAL saltIsActiveTr
440        LOGICAL saltForcing        LOGICAL saltForcing
441        LOGICAL maskIniTemp        LOGICAL maskIniTemp
442        LOGICAL maskIniSalt        LOGICAL maskIniSalt
443        LOGICAL checkIniTemp        LOGICAL checkIniTemp
444        LOGICAL checkIniSalt        LOGICAL checkIniSalt
445        LOGICAL useRealFreshWaterFlux        LOGICAL useSRCGSolver
       LOGICAL useFullLeith  
       LOGICAL useStrainTensionVisc  
       LOGICAL useAreaViscLength  
446        LOGICAL rigidLid        LOGICAL rigidLid
447        LOGICAL implicitFreeSurface        LOGICAL implicitFreeSurface
448          LOGICAL uniformLin_PhiSurf
449          LOGICAL uniformFreeSurfLev
450        LOGICAL exactConserv        LOGICAL exactConserv
451        LOGICAL linFSConserveTr        LOGICAL linFSConserveTr
452        LOGICAL uniformLin_PhiSurf        LOGICAL useRealFreshWaterFlux
453        LOGICAL quasiHydrostatic        LOGICAL quasiHydrostatic
454        LOGICAL nonHydrostatic        LOGICAL nonHydrostatic
455        LOGICAL use3Dsolver        LOGICAL use3Dsolver
456        LOGICAL implicitIntGravWave        LOGICAL implicitIntGravWave
457        LOGICAL staggerTimeStep        LOGICAL staggerTimeStep
458          LOGICAL doResetHFactors
459        LOGICAL momStepping        LOGICAL momStepping
460          LOGICAL calc_wVelocity
461        LOGICAL tempStepping        LOGICAL tempStepping
462        LOGICAL saltStepping        LOGICAL saltStepping
463        LOGICAL metricTerms        LOGICAL metricTerms
       LOGICAL useConstantF  
       LOGICAL useBetaPlaneF  
       LOGICAL useSphereF  
464        LOGICAL use3dCoriolis        LOGICAL use3dCoriolis
465        LOGICAL useCDscheme        LOGICAL useCDscheme
466        LOGICAL useEnergyConservingCoriolis        LOGICAL useEnergyConservingCoriolis
# Line 475  C                        & Last iteratio Line 496  C                        & Last iteratio
496        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio
497        LOGICAL outputTypesInclusive        LOGICAL outputTypesInclusive
498        LOGICAL dumpInitAndLast        LOGICAL dumpInitAndLast
499        LOGICAL debugMode        LOGICAL printDomain
500        LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact        LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact
       LOGICAL useSRCGSolver  
501    
502  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
503  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 503  C           defaults to 0.51 but can be Line 523  C           defaults to 0.51 but can be
523  C     delR      :: Vertical grid spacing ( units of r ).  C     delR      :: Vertical grid spacing ( units of r ).
524  C     delRc     :: Vertical grid spacing between cell centers (r unit).  C     delRc     :: Vertical grid spacing between cell centers (r unit).
525  C     delX      :: Separation between cell faces (m) or (deg), depending  C     delX      :: Separation between cell faces (m) or (deg), depending
526  C     delY        on input flags.  C     delY         on input flags. Note: moved to header file SET_GRID.h
527    C     xgOrigin   :: Origin of the X-axis (Cartesian Grid) / Longitude of Western
528    C                :: most cell face (Lat-Lon grid) (Note: this is an "inert"
529    C                :: parameter but it makes geographical references simple.)
530    C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern
531    C                :: most face (Lat-Lon grid).
532  C     gravity   :: Accel. due to gravity ( m/s^2 )  C     gravity   :: Accel. due to gravity ( m/s^2 )
533  C     recip_gravity and its inverse  C     recip_gravity and its inverse
534  C     gBaro     :: Accel. due to gravity used in barotropic equation ( m/s^2 )  C     gBaro     :: Accel. due to gravity used in barotropic equation ( m/s^2 )
535  C     rhoNil    :: Reference density for the linear equation of state  C     rhoNil    :: Reference density for the linear equation of state
536  C     rhoConst  :: Vertically constant reference density  C     rhoConst  :: Vertically constant reference density (Boussinesq)
537  C     rhoFacC   :: normalized (by rhoConst) reference density at cell-Center  C     rhoFacC   :: normalized (by rhoConst) reference density at cell-Center
538  C     rhoFacF   :: normalized (by rhoConst) reference density at cell-interFace  C     rhoFacF   :: normalized (by rhoConst) reference density at cell-interFace
539  C     rhoConstFresh :: Constant reference density for fresh water (rain)  C     rhoConstFresh :: Constant reference density for fresh water (rain)
# Line 516  C     rho1Ref   :: reference vertical pr Line 541  C     rho1Ref   :: reference vertical pr
541  C     tRef      :: reference vertical profile for potential temperature  C     tRef      :: reference vertical profile for potential temperature
542  C     sRef      :: reference vertical profile for salinity/specific humidity  C     sRef      :: reference vertical profile for salinity/specific humidity
543  C     phiRef    :: reference potential (pressure/rho, geopotential) profile  C     phiRef    :: reference potential (pressure/rho, geopotential) profile
544  C     dBdrRef   :: vertical gradient of reference boyancy  [(m/s/r)^2)]:  C     dBdrRef   :: vertical gradient of reference buoyancy  [(m/s/r)^2]:
545  C               :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]  C               :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]
546  C               :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]  C               :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]
547  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),
# Line 533  C     rUnit2mass :: units conversion fac Line 558  C     rUnit2mass :: units conversion fac
558  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].
559  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;
560  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;
 C     xgOrigin   :: Origin of the X-axis (Cartesian Grid) / Longitude of Western  
 C                :: most cell face (Lat-Lon grid) (Note: this is an "inert"  
 C                :: parameter but it makes geographical references simple.)  
 C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern  
 C                :: most face (Lat-Lon grid).  
561  C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).  C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).
562  C     recip_rSphere  :: Reciprocal radius of sphere ( m ).  C     recip_rSphere  :: Reciprocal radius of sphere ( m ).
563    C     radius_fromHorizGrid :: sphere Radius of input horiz. grid (Curvilinear Grid)
564  C     f0         :: Reference coriolis parameter ( 1/s )  C     f0         :: Reference coriolis parameter ( 1/s )
565  C                   ( Southern edge f for beta plane )  C                   ( Southern edge f for beta plane )
566  C     beta       :: df/dy ( s^-1.m^-1 )  C     beta       :: df/dy ( s^-1.m^-1 )
567    C     fPrime     :: Second Coriolis parameter ( 1/s ), related to Y-component
568    C                   of rotation (reference value = 2.Omega.Cos(Phi))
569  C     omega      :: Angular velocity ( rad/s )  C     omega      :: Angular velocity ( rad/s )
570  C     rotationPeriod :: Rotation period (s) (= 2.pi/omega)  C     rotationPeriod :: Rotation period (s) (= 2.pi/omega)
571  C     viscArNr   :: vertical profile of Eddy viscosity coeff.  C     viscArNr   :: vertical profile of Eddy viscosity coeff.
# Line 589  C     viscA4GridMax:: maximum and minimu Line 612  C     viscA4GridMax:: maximum and minimu
612  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity
613  C     diffKhT   :: Laplacian diffusion coeff. for mixing of  C     diffKhT   :: Laplacian diffusion coeff. for mixing of
614  C                 heat laterally ( m^2/s )  C                 heat laterally ( m^2/s )
 C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of heat vertically ( units of r^2/s )  
615  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of
616  C                 heat laterally ( m^4/s )  C                 heat laterally ( m^4/s )
617    C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.
618    C                 for mixing of heat vertically ( units of r^2/s )
619    C     diffKr4T  :: vertical profile of Biharmonic diffusion coeff.
620    C                 for mixing of heat vertically ( units of r^4/s )
621  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of
622  C                 salt laterally ( m^2/s )  C                 salt laterally ( m^2/s )
 C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of salt vertically ( units of r^2/s ),  
623  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of
624  C                 salt laterally ( m^4/s )  C                 salt laterally ( m^4/s )
625    C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.
626    C                 for mixing of salt vertically ( units of r^2/s ),
627    C     diffKr4S  :: vertical profile of Biharmonic diffusion coeff.
628    C                 for mixing of salt vertically ( units of r^4/s )
629  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979
630  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979
631  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979
# Line 619  C                    are referenced to t Line 646  C                    are referenced to t
646  C     deltaTMom    :: Timestep for momemtum equations ( s )  C     deltaTMom    :: Timestep for momemtum equations ( s )
647  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k
648  C     deltaTfreesurf :: Timestep for free-surface equation ( s )  C     deltaTfreesurf :: Timestep for free-surface equation ( s )
649  C     freesurfFac  :: Parameter to turn implicit free surface term on or off  C     freeSurfFac  :: Parameter to turn implicit free surface term on or off
650  C                    freesurfac = 1. uses implicit free surface  C                     freeSurFac = 1. uses implicit free surface
651  C                    freesurfac = 0. uses rigid lid  C                     freeSurFac = 0. uses rigid lid
652  C     abEps        :: Adams-Bashforth-2 stabilizing weight  C     abEps        :: Adams-Bashforth-2 stabilizing weight
653  C     alph_AB      :: Adams-Bashforth-3 primary factor  C     alph_AB      :: Adams-Bashforth-3 primary factor
654  C     beta_AB      :: Adams-Bashforth-3 secondary factor  C     beta_AB      :: Adams-Bashforth-3 secondary factor
# Line 646  C     endTime       :: Ending time for t Line 673  C     endTime       :: Ending time for t
673  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).
674  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).
675  C     dumpFreq      :: Frequency with which model state is written to  C     dumpFreq      :: Frequency with which model state is written to
676  C                     post-processing files ( s ).  C                      post-processing files ( s ).
677  C     diagFreq      :: Frequency with which model writes diagnostic output  C     diagFreq      :: Frequency with which model writes diagnostic output
678  C                     of intermediate quantities.  C                      of intermediate quantities.
679  C     afFacMom      :: Advection of momentum term tracer parameter  C     afFacMom      :: Advection of momentum term tracer parameter
680  C     vfFacMom      :: Momentum viscosity tracer parameter  C     vfFacMom      :: Momentum viscosity tracer parameter
681  C     pfFacMom      :: Momentum pressure forcing tracer parameter  C     pfFacMom      :: Momentum pressure forcing tracer parameter
# Line 702  C     thetaEuler    :: Euler angle, rota Line 729  C     thetaEuler    :: Euler angle, rota
729  C     psiEuler      :: Euler angle, rotation about new z-axis  C     psiEuler      :: Euler angle, rotation about new z-axis
730        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,
731       & cg2dpcOffDFac, cg3dTargetResidual,       & cg2dpcOffDFac, cg3dTargetResidual,
732       & delR, delRc, delX, delY,       & delR, delRc, xgOrigin, ygOrigin,
733       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,
734       & abEps, alph_AB, beta_AB,       & abEps, alph_AB, beta_AB,
735       & xgOrigin, ygOrigin, rSphere, recip_RSphere, f0, beta,       & rSphere, recip_rSphere, radius_fromHorizGrid,
736       & viscAh, viscAhW, viscAhMax,       & f0, beta, fPrime, omega, rotationPeriod,
737         & viscFacAdj, viscAh, viscAhW, viscAhMax,
738       & viscAhGrid, viscAhGridMax, viscAhGridMin,       & viscAhGrid, viscAhGridMax, viscAhGridMin,
739       & viscC2leith, viscC2leithD,       & viscC2leith, viscC2leithD,
740       & viscC2smag, viscC4smag,       & viscC2smag, viscC4smag,
# Line 715  C     psiEuler      :: Euler angle, rota Line 743  C     psiEuler      :: Euler angle, rota
743       & viscA4Grid, viscA4GridMax, viscA4GridMin,       & viscA4Grid, viscA4GridMax, viscA4GridMin,
744       & viscAhReMax, viscA4ReMax,       & viscAhReMax, viscA4ReMax,
745       & viscC4leith, viscC4leithD, viscArNr,       & viscC4leith, viscC4leithD, viscArNr,
746       & diffKhT, diffK4T, diffKrNrT,       & diffKhT, diffK4T, diffKrNrT, diffKr4T,
747       & diffKhS, diffK4S, diffKrNrS,       & diffKhS, diffK4S, diffKrNrS, diffKr4S,
748       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,
749       & BL79LatVary,       & BL79LatVary,
750       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,
# Line 724  C     psiEuler      :: Euler angle, rota Line 752  C     psiEuler      :: Euler angle, rota
752       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,
753       & hFacMin, hFacMinDz, hFacInf, hFacSup,       & hFacMin, hFacMinDz, hFacInf, hFacSup,
754       & gravity, recip_gravity, gBaro,       & gravity, recip_gravity, gBaro,
755       & rhonil, recip_rhonil, rhoConst, recip_rhoConst,       & rhoNil, rhoConst, recip_rhoConst,
756       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,
757       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,
758       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,
# Line 732  C     psiEuler      :: Euler angle, rota Line 760  C     psiEuler      :: Euler angle, rota
760       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,
761       & diagFreq, taveFreq, tave_lastIter, monitorFreq, adjMonitorFreq,       & diagFreq, taveFreq, tave_lastIter, monitorFreq, adjMonitorFreq,
762       & afFacMom, vfFacMom, pfFacMom, cfFacMom, foFacMom, mtFacMom,       & afFacMom, vfFacMom, pfFacMom, cfFacMom, foFacMom, mtFacMom,
763       & cosPower, cAdjFreq, omega, rotationPeriod,       & cosPower, cAdjFreq,
764       & tauThetaClimRelax, tauSaltClimRelax, latBandClimRelax,       & tauThetaClimRelax, tauSaltClimRelax, latBandClimRelax,
765       & externForcingCycle, externForcingPeriod,       & externForcingCycle, externForcingPeriod,
766       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,
# Line 750  C     psiEuler      :: Euler angle, rota Line 778  C     psiEuler      :: Euler angle, rota
778        _RL cg2dpcOffDFac        _RL cg2dpcOffDFac
779        _RL delR(Nr)        _RL delR(Nr)
780        _RL delRc(Nr+1)        _RL delRc(Nr+1)
781        _RL delX(Nx)        _RL xgOrigin
782        _RL delY(Ny)        _RL ygOrigin
783        _RL deltaT        _RL deltaT
784        _RL deltaTClock        _RL deltaTClock
785        _RL deltaTmom        _RL deltaTmom
786        _RL dTtracerLev(Nr)        _RL dTtracerLev(Nr)
787        _RL deltaTfreesurf        _RL deltaTfreesurf
788        _RL abEps, alph_AB, beta_AB        _RL abEps, alph_AB, beta_AB
       _RL xgOrigin  
       _RL ygOrigin  
789        _RL rSphere        _RL rSphere
790        _RL recip_rSphere        _RL recip_rSphere
791          _RL radius_fromHorizGrid
792        _RL f0        _RL f0
793          _RL beta
794          _RL fPrime
795          _RL omega
796          _RL rotationPeriod
797        _RL freeSurfFac        _RL freeSurfFac
798        _RL implicSurfPress        _RL implicSurfPress
799        _RL implicDiv2Dflow        _RL implicDiv2Dflow
# Line 773  C     psiEuler      :: Euler angle, rota Line 804  C     psiEuler      :: Euler angle, rota
804        _RL hFacMinDr        _RL hFacMinDr
805        _RL hFacInf        _RL hFacInf
806        _RL hFacSup        _RL hFacSup
       _RL beta  
807        _RL viscArNr(Nr)        _RL viscArNr(Nr)
808          _RL viscFacAdj
809        _RL viscAh        _RL viscAh
810        _RL viscAhW        _RL viscAhW
811        _RL viscAhD        _RL viscAhD
# Line 796  C     psiEuler      :: Euler angle, rota Line 827  C     psiEuler      :: Euler angle, rota
827        _RL viscC4leithD        _RL viscC4leithD
828        _RL viscC4smag        _RL viscC4smag
829        _RL diffKhT        _RL diffKhT
       _RL diffKrNrT(Nr)  
830        _RL diffK4T        _RL diffK4T
831          _RL diffKrNrT(Nr)
832          _RL diffKr4T(Nr)
833        _RL diffKhS        _RL diffKhS
       _RL diffKrNrS(Nr)  
834        _RL diffK4S        _RL diffK4S
835          _RL diffKrNrS(Nr)
836          _RL diffKr4S(Nr)
837        _RL diffKrBL79surf        _RL diffKrBL79surf
838        _RL diffKrBL79deep        _RL diffKrBL79deep
839        _RL diffKrBL79scl        _RL diffKrBL79scl
# Line 814  C     psiEuler      :: Euler angle, rota Line 847  C     psiEuler      :: Euler angle, rota
847        _RL gravity        _RL gravity
848        _RL recip_gravity        _RL recip_gravity
849        _RL gBaro        _RL gBaro
850        _RL rhonil,        recip_rhonil        _RL rhoNil
851        _RL rhoConst,      recip_rhoConst        _RL rhoConst,      recip_rhoConst
852        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)
853        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)
# Line 846  C     psiEuler      :: Euler angle, rota Line 879  C     psiEuler      :: Euler angle, rota
879        _RL mtFacMom        _RL mtFacMom
880        _RL cosPower        _RL cosPower
881        _RL cAdjFreq        _RL cAdjFreq
       _RL omega  
       _RL rotationPeriod  
882        _RL tauThetaClimRelax        _RL tauThetaClimRelax
883        _RL tauSaltClimRelax        _RL tauSaltClimRelax
884        _RL latBandClimRelax        _RL latBandClimRelax
# Line 910  C Logical flags for selecting packages Line 941  C Logical flags for selecting packages
941        LOGICAL useKPP        LOGICAL useKPP
942        LOGICAL useGMRedi        LOGICAL useGMRedi
943        LOGICAL useDOWN_SLOPE        LOGICAL useDOWN_SLOPE
944          LOGICAL useBBL
945        LOGICAL useCAL        LOGICAL useCAL
946        LOGICAL useEXF        LOGICAL useEXF
947        LOGICAL useBulkForce        LOGICAL useBulkForce
# Line 917  C Logical flags for selecting packages Line 949  C Logical flags for selecting packages
949        LOGICAL useCheapAML        LOGICAL useCheapAML
950        LOGICAL useGrdchk        LOGICAL useGrdchk
951        LOGICAL useSMOOTH        LOGICAL useSMOOTH
952          LOGICAL usePROFILES
953        LOGICAL useECCO        LOGICAL useECCO
954        LOGICAL useSBO        LOGICAL useSBO
955        LOGICAL useFLT        LOGICAL useFLT
# Line 925  C Logical flags for selecting packages Line 958  C Logical flags for selecting packages
958        LOGICAL useRBCS        LOGICAL useRBCS
959        LOGICAL useOffLine        LOGICAL useOffLine
960        LOGICAL useMATRIX        LOGICAL useMATRIX
961          LOGICAL useFRAZIL
962        LOGICAL useSEAICE        LOGICAL useSEAICE
963        LOGICAL useSALT_PLUME        LOGICAL useSALT_PLUME
964        LOGICAL useShelfIce        LOGICAL useShelfIce
965          LOGICAL useStreamIce
966        LOGICAL useICEFRONT        LOGICAL useICEFRONT
967        LOGICAL useThSIce        LOGICAL useThSIce
968        LOGICAL useATM2d        LOGICAL useATM2d
# Line 945  C Logical flags for selecting packages Line 980  C Logical flags for selecting packages
980        COMMON /PARM_PACKAGES/        COMMON /PARM_PACKAGES/
981       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,
982       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,
983       &        useGMRedi, useDOWN_SLOPE,       &        useGMRedi, useBBL, useDOWN_SLOPE,
984       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,
985       &        useGrdchk, useSMOOTH, useECCO, useSBO, useFLT,       &        useGrdchk,useSMOOTH,usePROFILES,useECCO,useSBO, useFLT,
986       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,
987       &        useSEAICE, useSALT_PLUME, useShelfIce,       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,
988       &        useICEFRONT, useThSIce,       &        useStreamIce, useICEFRONT, useThSIce,
989       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,
990       &        useDiagnostics, useREGRID, useLayers, useMNC,       &        useDiagnostics, useREGRID, useLayers, useMNC,
991       &        useRunClock, useEMBED_FILES,       &        useRunClock, useEMBED_FILES,
992       &        useMYPACKAGE       &        useMYPACKAGE
993    
994    C     Logical flags for turning off parts of the code in adjoint mode
995          LOGICAL useKPPinAdMode, useKPPinFwdMode
996          LOGICAL useGMrediInAdMode, useGMrediInFwdMode
997          LOGICAL useSEAICEinAdMode, useSEAICEinFwdMode
998          COMMON /PARM_PACKAGES_ADJ/
999         &       useKPPinAdMode, useKPPinFwdMode,
1000         &       useGMrediInAdMode, useGMrediInFwdMode,
1001         &       useSEAICEinAdMode, useSEAICEinFwdMode
1002    
1003  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
1004  CEH3 ;;; mode:fortran ***  CEH3 ;;; mode:fortran ***
1005  CEH3 ;;; End: ***  CEH3 ;;; End: ***
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