/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.223 by jmc, Fri Sep 5 19:55:56 2008 UTC revision 1.239 by jmc, Sat Sep 11 21:23:08 2010 UTC
# Line 38  C     sRefFile      :: File containing r Line 38  C     sRefFile      :: File containing r
38  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)
39  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)
40  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)
41    C     hybSigmFile   :: File containing hybrid-sigma vertical coord. coeff. (2x 1.D)
42  C     delXFile      :: File containing X-spacing grid definition (1.D array)  C     delXFile      :: File containing X-spacing grid definition (1.D array)
43  C     delYFile      :: File containing Y-spacing grid definition (1.D array)  C     delYFile      :: File containing Y-spacing grid definition (1.D array)
44  C     horizGridFile :: File containing horizontal-grid definition  C     horizGridFile :: File containing horizontal-grid definition
# Line 46  C     bathyFile       :: File containing Line 47  C     bathyFile       :: File containing
47  C                        is taken from inline function.  C                        is taken from inline function.
48  C     topoFile        :: File containing the topography of the surface (unit=m)  C     topoFile        :: File containing the topography of the surface (unit=m)
49  C                        (mainly used for the atmosphere = ground height).  C                        (mainly used for the atmosphere = ground height).
 C     shelfIceFile    :: File containing the topography of the shelfice draught  
 C                        (unit=m)  
50  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)
51  C                        for potential temperature.  C                        for potential temperature.
52  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)
53  C                        for salinity.  C                        for salinity.
54  C     diffKrFile      :: File containing 3D specification of vertical diffusivity  C     diffKrFile      :: File containing 3D specification of vertical diffusivity
55    C     viscAhDfile     :: File containing 3D specification of horizontal viscosity
56    C     viscAhZfile     :: File containing 3D specification of horizontal viscosity
57    C     viscA4Dfile     :: File containing 3D specification of horizontal viscosity
58    C     viscA4Zfile     :: File containing 3D specification of horizontal viscosity
59  C     zonalWindFile   :: File containing zonal wind data  C     zonalWindFile   :: File containing zonal wind data
60  C     meridWindFile   :: File containing meridional wind data  C     meridWindFile   :: File containing meridional wind data
61  C     thetaClimFile   :: File containing surface theta climataology used  C     thetaClimFile   :: File containing surface theta climataology used
# Line 77  C     the_run_name    :: string identify Line 80  C     the_run_name    :: string identify
80       &                buoyancyRelation, eosType,       &                buoyancyRelation, eosType,
81       &                pickupSuff, mdsioLocalDir,       &                pickupSuff, mdsioLocalDir,
82       &                tRefFile, sRefFile, rhoRefFile,       &                tRefFile, sRefFile, rhoRefFile,
83       &                delRFile, delRcFile,       &                delRFile, delRcFile, hybSigmFile,
84       &                delXFile, delYFile, horizGridFile,       &                delXFile, delYFile, horizGridFile,
85       &                bathyFile, topoFile, shelfIceFile,       &                bathyFile, topoFile,
86         &                viscAhDfile, viscAhZfile,
87         &                viscA4Dfile, viscA4Zfile,
88       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,
89       &                zonalWindFile, meridWindFile, thetaClimFile,       &                zonalWindFile, meridWindFile, thetaClimFile,
90       &                saltClimFile,       &                saltClimFile,
# Line 99  C     the_run_name    :: string identify Line 104  C     the_run_name    :: string identify
104        CHARACTER*(MAX_LEN_FNAM) rhoRefFile        CHARACTER*(MAX_LEN_FNAM) rhoRefFile
105        CHARACTER*(MAX_LEN_FNAM) delRFile        CHARACTER*(MAX_LEN_FNAM) delRFile
106        CHARACTER*(MAX_LEN_FNAM) delRcFile        CHARACTER*(MAX_LEN_FNAM) delRcFile
107          CHARACTER*(MAX_LEN_FNAM) hybSigmFile
108        CHARACTER*(MAX_LEN_FNAM) delXFile        CHARACTER*(MAX_LEN_FNAM) delXFile
109        CHARACTER*(MAX_LEN_FNAM) delYFile        CHARACTER*(MAX_LEN_FNAM) delYFile
110        CHARACTER*(MAX_LEN_FNAM) horizGridFile        CHARACTER*(MAX_LEN_FNAM) horizGridFile
111        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile, shelfIceFile        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile
112        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile
113        CHARACTER*(MAX_LEN_FNAM) diffKrFile        CHARACTER*(MAX_LEN_FNAM) diffKrFile
114          CHARACTER*(MAX_LEN_FNAM) viscAhDfile
115          CHARACTER*(MAX_LEN_FNAM) viscAhZfile
116          CHARACTER*(MAX_LEN_FNAM) viscA4Dfile
117          CHARACTER*(MAX_LEN_FNAM) viscA4Zfile
118        CHARACTER*(MAX_LEN_FNAM) zonalWindFile        CHARACTER*(MAX_LEN_FNAM) zonalWindFile
119        CHARACTER*(MAX_LEN_FNAM) meridWindFile        CHARACTER*(MAX_LEN_FNAM) meridWindFile
120        CHARACTER*(MAX_LEN_FNAM) thetaClimFile        CHARACTER*(MAX_LEN_FNAM) thetaClimFile
# Line 145  C     nonlinFreeSurf      :: option rela Line 155  C     nonlinFreeSurf      :: option rela
155  C                           =0 Linear free surface ; >0 Non-linear  C                           =0 Linear free surface ; >0 Non-linear
156  C     select_rStar        :: option related to r* vertical coordinate  C     select_rStar        :: option related to r* vertical coordinate
157  C                           =0 (default) use r coord. ; > 0 use r*  C                           =0 (default) use r coord. ; > 0 use r*
158    C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:
159    C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.
160    C     selectSigmaCoord    :: option related to sigma vertical coordinate
161  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior
162  C                            (3-D generalisation of oceanic real-fresh water flux)  C                            (3-D generalisation of oceanic real-fresh water flux)
163  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)
# Line 171  C     debugLevel          :: debug level Line 184  C     debugLevel          :: debug level
184       &        writeStatePrec,       &        writeStatePrec,
185       &        writeBinaryPrec, readBinaryPrec,       &        writeBinaryPrec, readBinaryPrec,
186       &        nonlinFreeSurf, select_rStar,       &        nonlinFreeSurf, select_rStar,
187         &        selectNHfreeSurf,
188         &        selectSigmaCoord,
189       &        selectAddFluid,       &        selectAddFluid,
190       &        momForcingOutAB, tracForcingOutAB,       &        momForcingOutAB, tracForcingOutAB,
191       &        tempAdvScheme, tempVertAdvScheme,       &        tempAdvScheme, tempVertAdvScheme,
# Line 190  C     debugLevel          :: debug level Line 205  C     debugLevel          :: debug level
205        INTEGER readBinaryPrec        INTEGER readBinaryPrec
206        INTEGER nonlinFreeSurf        INTEGER nonlinFreeSurf
207        INTEGER select_rStar        INTEGER select_rStar
208          INTEGER selectNHfreeSurf
209          INTEGER selectSigmaCoord
210        INTEGER selectAddFluid        INTEGER selectAddFluid
211        INTEGER momForcingOutAB, tracForcingOutAB        INTEGER momForcingOutAB, tracForcingOutAB
212        INTEGER tempAdvScheme, tempVertAdvScheme        INTEGER tempAdvScheme, tempVertAdvScheme
# Line 264  C     saltAdvection  :: Flag which turns Line 281  C     saltAdvection  :: Flag which turns
281  C     saltIsActiveTr :: Salinity  is a dynamically active tracer  C     saltIsActiveTr :: Salinity  is a dynamically active tracer
282  C     saltForcing    :: Flag which turns external forcing of salinity on  C     saltForcing    :: Flag which turns external forcing of salinity on
283  C                       and off.  C                       and off.
284    C     maskIniTemp    :: apply mask to initial Pot.Temp.
285    C     maskIniSalt    :: apply mask to initial salinity
286    C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.
287    C     checkIniSalt   :: check for points with identically zero initial salinity
288  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux
289  C                         as a real Fresh Water (=> changes the Sea Level)  C                         as a real Fresh Water (=> changes the Sea Level)
290  C                         if F, converts P+R-E to salt flux (no SL effect)  C                         if F, converts P+R-E to salt flux (no SL effect)
291    C- Pressure solver related parameters (PARM02)
292    C     useSRCGSolver  :: Set to true to use conjugate gradient
293    C                       solver with single reduction (only one call of
294    C                       s/r mpi_allreduce), default is false
295  C- Time-stepping params:  C- Time-stepping params:
296  C     rigidLid            :: Set to true to use rigid lid  C     rigidLid            :: Set to true to use rigid lid
297  C     implicitFreeSurface :: Set to true to use implicit free surface  C     implicitFreeSurface :: Set to true to use implicit free surface
# Line 303  C     allowFreezing  :: Allows surface w Line 328  C     allowFreezing  :: Allows surface w
328  C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)  C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)
329  C     periodicExternalForcing :: Set true if forcing is time-dependant  C     periodicExternalForcing :: Set true if forcing is time-dependant
330  C- I/O parameters -  C- I/O parameters -
331  C     globalFiles    :: Selects between "global" and "tiled" files  C     globalFiles    :: Selects between "global" and "tiled" files.
332  C     useSingleCpuIO :: On SGI platforms, option globalFiles is either  C                       On some platforms with MPI, option globalFiles is either
333  C                       slow (f77) or does not work (f90).  When  C                       slow or does not work. Use useSingleCpuIO instead.
334  C                       useSingleCpuIO is set, mdsio_writefield.F  C     useSingleCpuIO :: moved to EEPARAMS.h
 C                       outputs from master mpi process only.  
335  C     pickupStrictlyMatch :: check and stop if pickup-file do not stricly match  C     pickupStrictlyMatch :: check and stop if pickup-file do not stricly match
336  C     startFromPickupAB2 :: with AB-3 code, start from an AB-2 pickup  C     startFromPickupAB2 :: with AB-3 code, start from an AB-2 pickup
337  C     usePickupBeforeC54 :: start from old-pickup files, generated with code from  C     usePickupBeforeC54 :: start from old-pickup files, generated with code from
# Line 341  C                        & Last iteratio Line 365  C                        & Last iteratio
365       & momStepping, tempStepping, saltStepping,       & momStepping, tempStepping, saltStepping,
366       & tempAdvection, tempIsActiveTr, tempForcing,       & tempAdvection, tempIsActiveTr, tempForcing,
367       & saltAdvection, saltIsActiveTr, saltForcing,       & saltAdvection, saltIsActiveTr, saltForcing,
368         & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,
369       & useRealFreshWaterFlux,       & useRealFreshWaterFlux,
370       & rigidLid, implicitFreeSurface, exactConserv, linFSConserveTr,       & rigidLid, implicitFreeSurface, exactConserv, linFSConserveTr,
371       & uniformLin_PhiSurf,       & uniformLin_PhiSurf,
# Line 354  C                        & Last iteratio Line 379  C                        & Last iteratio
379       & doThetaClimRelax, doSaltClimRelax,       & doThetaClimRelax, doSaltClimRelax,
380       & allowFreezing, useOldFreezing,       & allowFreezing, useOldFreezing,
381       & periodicExternalForcing,       & periodicExternalForcing,
382       & globalFiles, useSingleCpuIO,       & globalFiles,
383       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,
384       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,
385       & writePickupAtEnd,       & writePickupAtEnd,
386       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
387       & outputTypesInclusive, dumpInitAndLast, debugMode,       & outputTypesInclusive, dumpInitAndLast, debugMode,
388       & inAdMode, inAdTrue, inAdFalse, inAdExact       & inAdMode, inAdTrue, inAdFalse, inAdExact,
389         & useSRCGSolver
390    
391        LOGICAL fluidIsAir        LOGICAL fluidIsAir
392        LOGICAL fluidIsWater        LOGICAL fluidIsWater
# Line 389  C                        & Last iteratio Line 415  C                        & Last iteratio
415        LOGICAL saltAdvection        LOGICAL saltAdvection
416        LOGICAL saltIsActiveTr        LOGICAL saltIsActiveTr
417        LOGICAL saltForcing        LOGICAL saltForcing
418          LOGICAL maskIniTemp
419          LOGICAL maskIniSalt
420          LOGICAL checkIniTemp
421          LOGICAL checkIniSalt
422        LOGICAL useRealFreshWaterFlux        LOGICAL useRealFreshWaterFlux
423        LOGICAL useFullLeith        LOGICAL useFullLeith
424        LOGICAL useStrainTensionVisc        LOGICAL useStrainTensionVisc
# Line 437  C                        & Last iteratio Line 467  C                        & Last iteratio
467        LOGICAL useOldFreezing        LOGICAL useOldFreezing
468        LOGICAL periodicExternalForcing        LOGICAL periodicExternalForcing
469        LOGICAL globalFiles        LOGICAL globalFiles
       LOGICAL useSingleCpuIO  
470        LOGICAL pickupStrictlyMatch        LOGICAL pickupStrictlyMatch
471        LOGICAL usePickupBeforeC54        LOGICAL usePickupBeforeC54
472        LOGICAL startFromPickupAB2        LOGICAL startFromPickupAB2
# Line 448  C                        & Last iteratio Line 477  C                        & Last iteratio
477        LOGICAL dumpInitAndLast        LOGICAL dumpInitAndLast
478        LOGICAL debugMode        LOGICAL debugMode
479        LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact        LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact
480          LOGICAL useSRCGSolver
481    
482  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
483  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 503  C     rUnit2mass :: units conversion fac Line 533  C     rUnit2mass :: units conversion fac
533  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].
534  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;
535  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;
536  C     phiMin    :: Latitude of southern most cell face.  C     xgOrigin   :: Origin of the X-axis (Cartesian Grid) / Longitude of Western
537  C     thetaMin  :: Longitude of western most cell face (this  C                :: most cell face (Lat-Lon grid) (Note: this is an "inert"
538  C                 is an "inert" parameter but it is included  C                :: parameter but it makes geographical references simple.)
539  C                 to make geographical references simple.)  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern
540  C     rSphere   :: Radius of sphere for a spherical polar grid ( m ).  C                :: most face (Lat-Lon grid).
541    C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).
542  C     recip_rSphere  :: Reciprocal radius of sphere ( m ).  C     recip_rSphere  :: Reciprocal radius of sphere ( m ).
543  C     f0        :: Reference coriolis parameter ( 1/s )  C     f0         :: Reference coriolis parameter ( 1/s )
544  C                 ( Southern edge f for beta plane )  C                   ( Southern edge f for beta plane )
545  C     beta      :: df/dy ( s^-1.m^-1 )  C     beta       :: df/dy ( s^-1.m^-1 )
546  C     omega     :: Angular velocity ( rad/s )  C     omega      :: Angular velocity ( rad/s )
547  C     rotationPeriod :: Rotation period (s) (= 2.pi/omega)  C     rotationPeriod :: Rotation period (s) (= 2.pi/omega)
548  C     viscAr    :: Eddy viscosity coeff. for mixing of  C     viscArNr   :: vertical profile of Eddy viscosity coeff.
549  C                 momentum vertically ( units of r^2/s )  C                   for vertical mixing of momentum ( units of r^2/s )
550  C     viscAh    :: Eddy viscosity coeff. for mixing of  C     viscAh     :: Eddy viscosity coeff. for mixing of
551  C                 momentum laterally ( m^2/s )  C                   momentum laterally ( m^2/s )
552  C     viscAhW   :: Eddy viscosity coeff. for mixing of vertical  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical
553  C                 momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
554  C                 model, defaults to viscAh if unset ( m^2/s )  C                   model, defaults to viscAh if unset ( m^2/s )
555  C                 Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
556  C     viscA4    :: Biharmonic viscosity coeff. for mixing of  C     viscA4     :: Biharmonic viscosity coeff. for mixing of
557  C                 momentum laterally ( m^4/s )  C                   momentum laterally ( m^4/s )
558  C     viscA4W   :: Biharmonic viscosity coeff. for mixing of vertical  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical
559  C                 momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
560  C                 model, defaults to viscA4 if unset ( m^2/s )  C                   model, defaults to viscA4 if unset ( m^2/s )
561  C                 Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
562  C     viscAhD   :: Eddy viscosity coeff. for mixing of momentum laterally  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally
563  C                  (act on Divergence part) ( m^2/s )  C                   (act on Divergence part) ( m^2/s )
564  C     viscAhZ   :: Eddy viscosity coeff. for mixing of momentum laterally  C     viscAhZ    :: Eddy viscosity coeff. for mixing of momentum laterally
565  C                  (act on Vorticity  part) ( m^2/s )  C                   (act on Vorticity  part) ( m^2/s )
566  C     viscA4D   :: Biharmonic viscosity coeff. for mixing of momentum laterally  C     viscA4D    :: Biharmonic viscosity coeff. for mixing of momentum laterally
567  C                  (act on Divergence part) ( m^4/s )  C                   (act on Divergence part) ( m^4/s )
568  C     viscA4Z   :: Biharmonic viscosity coeff. for mixing of momentum laterally  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally
569  C                  (act on Vorticity  part) ( m^4/s )  C                   (act on Vorticity  part) ( m^4/s )
570  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))
571  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))
572  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))
# Line 598  C     implicSurfPress :: parameter of th Line 629  C     implicSurfPress :: parameter of th
629  C                     Implicit part of Surface Pressure Gradient ( 0-1 )  C                     Implicit part of Surface Pressure Gradient ( 0-1 )
630  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :
631  C                     Implicit part of barotropic flow Divergence ( 0-1 )  C                     Implicit part of barotropic flow Divergence ( 0-1 )
632    C     implicitNHPress :: parameter of the Crank-Nickelson time stepping :
633    C                     Implicit part of Non-Hydrostatic Pressure Gradient ( 0-1 )
634  C     hFacMin      :: Minimum fraction size of a cell (affects hFacC etc...)  C     hFacMin      :: Minimum fraction size of a cell (affects hFacC etc...)
635  C     hFacMinDz    :: Minimum dimesional size of a cell (affects hFacC etc..., m)  C     hFacMinDz    :: Minimum dimensional size of a cell (affects hFacC etc..., m)
636  C     hFacMinDp    :: Minimum dimesional size of a cell (affects hFacC etc..., Pa)  C     hFacMinDp    :: Minimum dimensional size of a cell (affects hFacC etc..., Pa)
637  C     hFacMinDr    :: Minimum dimesional size of a cell (affects hFacC etc..., units of r)  C     hFacMinDr    :: Minimum dimensional size of a cell (-> hFacC etc..., r units)
638  C     hFacInf      :: Threshold (inf and sup) for fraction size of surface cell  C     hFacInf      :: Threshold (inf and sup) for fraction size of surface cell
639  C     hFacSup        that control vanishing and creating levels  C     hFacSup          that control vanishing and creating levels
640  C     tauCD        :: CD scheme coupling timescale ( 1/s )  C     tauCD         :: CD scheme coupling timescale ( s )
641  C     rCD          :: CD scheme normalised coupling parameter ( 0-1 )  C     rCD           :: CD scheme normalised coupling parameter (= 1 - deltaT/tauCD)
642    C     epsAB_CD      :: Adams-Bashforth-2 stabilizing weight used in CD scheme
643  C     baseTime      :: model base time (time origin) = time @ iteration zero  C     baseTime      :: model base time (time origin) = time @ iteration zero
644  C     startTime     :: Starting time for this integration ( s ).  C     startTime     :: Starting time for this integration ( s ).
645  C     endTime       :: Ending time for this integration ( s ).  C     endTime       :: Ending time for this integration ( s ).
# Line 641  C     convertFW2Salt :: salinity, used t Line 675  C     convertFW2Salt :: salinity, used t
675  C                       (use model surface (local) value if set to -1)  C                       (use model surface (local) value if set to -1)
676  C     temp_EvPrRn :: temperature of Rain & Evap.  C     temp_EvPrRn :: temperature of Rain & Evap.
677  C     salt_EvPrRn :: salinity of Rain & Evap.  C     salt_EvPrRn :: salinity of Rain & Evap.
678    C     temp_addMass :: temperature of addMass array
679    C     salt_addMass :: salinity of addMass array
680  C        (notes: a) tracer content of Rain/Evap only used if both  C        (notes: a) tracer content of Rain/Evap only used if both
681  C                     NonLin_FrSurf & useRealFreshWater are set.  C                     NonLin_FrSurf & useRealFreshWater are set.
682  C                b) use model surface (local) value if set to UNSET_RL)  C                b) use model surface (local) value if set to UNSET_RL)
683  C     hMixCrit    :: criteria for mixed-layer diagnostic  C     hMixCriteria:: criteria for mixed-layer diagnostic
684    C     dRhoSmall   :: parameter for mixed-layer diagnostic
685    C     hMixSmooth  :: Smoothing parameter for mixed-layer diag (default=0=no smoothing)
686  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]
687  C     Ro_SeaLevel :: standard position of Sea-Level in "R" coordinate, used as  C     Ro_SeaLevel :: standard position of Sea-Level in "R" coordinate, used as
688  C                    starting value (k=1) for vertical coordinate (rf(1)=Ro_SeaLevel)  C                    starting value (k=1) for vertical coordinate (rf(1)=Ro_SeaLevel)
689    C     rSigmaBnd   :: vertical position (in r-unit) of r/sigma transition (Hybrid-Sigma)
690  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)
691  C                           (default=2: full drag ; =1: gives half-slip BC)  C                           (default=2: full drag ; =1: gives half-slip BC)
692  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)
# Line 666  C     psiEuler      :: Euler angle, rota Line 705  C     psiEuler      :: Euler angle, rota
705       & delR, delRc, delX, delY,       & delR, delRc, delX, delY,
706       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,
707       & abEps, alph_AB, beta_AB,       & abEps, alph_AB, beta_AB,
708       & phiMin, thetaMin, rSphere, recip_RSphere, f0, beta,       & xgOrigin, ygOrigin, rSphere, recip_RSphere, f0, beta,
709       & viscAh, viscAhW, viscAhMax,       & viscAh, viscAhW, viscAhMax,
710       & viscAhGrid, viscAhGridMax, viscAhGridMin,       & viscAhGrid, viscAhGridMax, viscAhGridMin,
711       & viscC2leith, viscC2leithD,       & viscC2leith, viscC2leithD,
# Line 675  C     psiEuler      :: Euler angle, rota Line 714  C     psiEuler      :: Euler angle, rota
714       & viscA4, viscA4W, viscA4Max,       & viscA4, viscA4W, viscA4Max,
715       & viscA4Grid, viscA4GridMax, viscA4GridMin,       & viscA4Grid, viscA4GridMax, viscA4GridMin,
716       & viscAhReMax, viscA4ReMax,       & viscAhReMax, viscA4ReMax,
717       & viscC4leith, viscC4leithD, viscAr,       & viscC4leith, viscC4leithD, viscArNr,
718       & diffKhT, diffK4T, diffKrNrT,       & diffKhT, diffK4T, diffKrNrT,
719       & diffKhS, diffK4S, diffKrNrS,       & diffKhS, diffK4S, diffKrNrS,
720       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,
721       & BL79LatVary,       & BL79LatVary,
722       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,
723       & delT, tauCD, rCD, freeSurfFac, implicSurfPress, implicDiv2Dflow,       & tauCD, rCD, epsAB_CD,
724         & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,
725       & hFacMin, hFacMinDz, hFacInf, hFacSup,       & hFacMin, hFacMinDz, hFacInf, hFacSup,
726       & gravity, recip_gravity, gBaro,       & gravity, recip_gravity, gBaro,
727       & rhonil, recip_rhonil, rhoConst, recip_rhoConst,       & rhonil, recip_rhonil, rhoConst, recip_rhoConst,
# Line 696  C     psiEuler      :: Euler angle, rota Line 736  C     psiEuler      :: Euler angle, rota
736       & tauThetaClimRelax, tauSaltClimRelax, latBandClimRelax,       & tauThetaClimRelax, tauSaltClimRelax, latBandClimRelax,
737       & externForcingCycle, externForcingPeriod,       & externForcingCycle, externForcingPeriod,
738       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,
739       & hFacMinDr, hFacMinDp,       & temp_addMass, salt_addMass, hFacMinDr, hFacMinDp,
740       & ivdc_kappa, hMixCriteria, Ro_SeaLevel,       & ivdc_kappa, hMixCriteria, dRhoSmall, hMixSmooth,
741         & Ro_SeaLevel, rSigmaBnd,
742       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,
743       & smoothAbsFuncRange,       & smoothAbsFuncRange,
744       & tCylIn, tCylOut,       & tCylIn, tCylOut,
# Line 717  C     psiEuler      :: Euler angle, rota Line 758  C     psiEuler      :: Euler angle, rota
758        _RL dTtracerLev(Nr)        _RL dTtracerLev(Nr)
759        _RL deltaTfreesurf        _RL deltaTfreesurf
760        _RL abEps, alph_AB, beta_AB        _RL abEps, alph_AB, beta_AB
761        _RL phiMin        _RL xgOrigin
762        _RL thetaMin        _RL ygOrigin
763        _RL rSphere        _RL rSphere
764        _RL recip_rSphere        _RL recip_rSphere
765        _RL f0        _RL f0
766        _RL freeSurfFac        _RL freeSurfFac
767        _RL implicSurfPress        _RL implicSurfPress
768        _RL implicDiv2Dflow        _RL implicDiv2Dflow
769          _RL implicitNHPress
770        _RL hFacMin        _RL hFacMin
771        _RL hFacMinDz        _RL hFacMinDz
772        _RL hFacMinDp        _RL hFacMinDp
# Line 732  C     psiEuler      :: Euler angle, rota Line 774  C     psiEuler      :: Euler angle, rota
774        _RL hFacInf        _RL hFacInf
775        _RL hFacSup        _RL hFacSup
776        _RL beta        _RL beta
777        _RL viscAr        _RL viscArNr(Nr)
778        _RL viscAh        _RL viscAh
779        _RL viscAhW        _RL viscAhW
780        _RL viscAhD        _RL viscAhD
# Line 768  C     psiEuler      :: Euler angle, rota Line 810  C     psiEuler      :: Euler angle, rota
810        _RL diffKrBLEQdeep        _RL diffKrBLEQdeep
811        _RL diffKrBLEQscl        _RL diffKrBLEQscl
812        _RL diffKrBLEQHo        _RL diffKrBLEQHo
813        _RL delt        _RL tauCD, rCD, epsAB_CD
       _RL tauCD  
       _RL rCD  
814        _RL gravity        _RL gravity
815        _RL recip_gravity        _RL recip_gravity
816        _RL gBaro        _RL gBaro
# Line 816  C     psiEuler      :: Euler angle, rota Line 856  C     psiEuler      :: Euler angle, rota
856        _RL convertFW2Salt        _RL convertFW2Salt
857        _RL temp_EvPrRn        _RL temp_EvPrRn
858        _RL salt_EvPrRn        _RL salt_EvPrRn
859          _RL temp_addMass
860          _RL salt_addMass
861        _RL ivdc_kappa        _RL ivdc_kappa
862        _RL hMixCriteria        _RL hMixCriteria
863          _RL dRhoSmall
864          _RL hMixSmooth
865        _RL Ro_SeaLevel        _RL Ro_SeaLevel
866          _RL rSigmaBnd
867        _RL sideDragFactor        _RL sideDragFactor
868        _RL bottomDragLinear        _RL bottomDragLinear
869        _RL bottomDragQuadratic        _RL bottomDragQuadratic
# Line 871  C Logical flags for selecting packages Line 916  C Logical flags for selecting packages
916        LOGICAL useEBM        LOGICAL useEBM
917        LOGICAL useCheapAML        LOGICAL useCheapAML
918        LOGICAL useGrdchk        LOGICAL useGrdchk
919          LOGICAL useSMOOTH
920        LOGICAL useECCO        LOGICAL useECCO
921        LOGICAL useSBO        LOGICAL useSBO
922        LOGICAL useFLT        LOGICAL useFLT
# Line 882  C Logical flags for selecting packages Line 928  C Logical flags for selecting packages
928        LOGICAL useSEAICE        LOGICAL useSEAICE
929        LOGICAL useSALT_PLUME        LOGICAL useSALT_PLUME
930        LOGICAL useShelfIce        LOGICAL useShelfIce
931          LOGICAL useICEFRONT
932        LOGICAL useThSIce        LOGICAL useThSIce
933        LOGICAL useATM2d        LOGICAL useATM2d
934        LOGICAL useAIM        LOGICAL useAIM
# Line 890  C Logical flags for selecting packages Line 937  C Logical flags for selecting packages
937        LOGICAL useGridAlt        LOGICAL useGridAlt
938        LOGICAL useDiagnostics        LOGICAL useDiagnostics
939        LOGICAL useREGRID        LOGICAL useREGRID
940          LOGICAL useLayers
941        LOGICAL useMNC        LOGICAL useMNC
942        LOGICAL useRunClock        LOGICAL useRunClock
943        LOGICAL useEMBED_FILES        LOGICAL useEMBED_FILES
# Line 899  C Logical flags for selecting packages Line 947  C Logical flags for selecting packages
947       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,
948       &        useGMRedi, useDOWN_SLOPE,       &        useGMRedi, useDOWN_SLOPE,
949       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,
950       &        useGrdchk, useECCO, useSBO, useFLT,       &        useGrdchk, useSMOOTH, useECCO, useSBO, useFLT,
951       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,
952       &        useSEAICE, useSALT_PLUME, useShelfIce, useThSIce,       &        useSEAICE, useSALT_PLUME, useShelfIce,
953         &        useICEFRONT, useThSIce,
954       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,
955       &        useDiagnostics, useREGRID, useMNC,       &        useDiagnostics, useREGRID, useLayers, useMNC,
956       &        useRunClock, useEMBED_FILES,       &        useRunClock, useEMBED_FILES,
957       &        useMYPACKAGE       &        useMYPACKAGE
958  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
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