/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.134 by jmc, Mon Oct 18 21:32:48 2004 UTC revision 1.168 by jmc, Wed Sep 28 01:34:01 2005 UTC
# Line 49  C     Checkpoint data Line 49  C     Checkpoint data
49    
50  C--   COMMON /PARM_C/ Character valued parameters used by the model.  C--   COMMON /PARM_C/ Character valued parameters used by the model.
51  C     checkPtSuff :: List of checkpoint file suffices  C     checkPtSuff :: List of checkpoint file suffices
52    C     delXFile      :: File containing X-spacing grid definition (1.D array)
53    C     delYFile      :: File containing Y-spacing grid definition (1.D array)
54    C     horizGridFile :: File containing horizontal-grid definition
55    C                        (only when using curvilinear_grid)
56  C     bathyFile   :: File containing bathymetry. If not defined bathymetry  C     bathyFile   :: File containing bathymetry. If not defined bathymetry
57  C                   is taken from inline function.  C                   is taken from inline function.
58  C     topoFile    :: File containing the topography of the surface (unit=m)  C     topoFile    :: File containing the topography of the surface (unit=m)
# Line 68  C     surfQnetFile    :: File containing Line 72  C     surfQnetFile    :: File containing
72  C     surfQswFile     :: File containing surface shortwave radiation  C     surfQswFile     :: File containing surface shortwave radiation
73  C     dQdTfile        :: File containing thermal relaxation coefficient  C     dQdTfile        :: File containing thermal relaxation coefficient
74  C     EmPmRfile       :: File containing surface fresh water flux  C     EmPmRfile       :: File containing surface fresh water flux
75    C     saltFluxFile    :: File containing surface salt flux
76  C     pLoadFile       :: File containing pressure loading  C     pLoadFile       :: File containing pressure loading
77    C     eddyTauxFile    :: File containing zonal Eddy stress data
78    C     eddyTauyFile    :: File containing meridional Eddy stress data
79  C     buoyancyRelation :: Flag used to indicate which relation to use to  C     buoyancyRelation :: Flag used to indicate which relation to use to
80  C                        get buoyancy.  C                        get buoyancy.
81  C     eosType         :: choose the equation of state:  C     eosType         :: choose the equation of state:
82  C                        LINEAR, POLY3, UNESCO, JMD95Z, JMD95P, MDJWF, IDEALGAS  C                        LINEAR, POLY3, UNESCO, JMD95Z, JMD95P, MDJWF, IDEALGAS
83  C     the_run_name    :: string identifying the name of the model "run"  C     the_run_name    :: string identifying the name of the model "run"
84        COMMON /PARM_C/ checkPtSuff,        COMMON /PARM_C/ checkPtSuff,
85         &                delXFile, delYFile, horizGridFile,
86       &                bathyFile, topoFile,       &                bathyFile, topoFile,
87       &                hydrogThetaFile, hydrogSaltFile,       &                hydrogThetaFile, hydrogSaltFile,
88       &                zonalWindFile, meridWindFile, thetaClimFile,       &                zonalWindFile, meridWindFile, thetaClimFile,
89       &                saltClimFile, buoyancyRelation,       &                saltClimFile, buoyancyRelation,
90       &                EmPmRfile, surfQfile, surfQnetFile, surfQswFile,       &                EmPmRfile, saltFluxFile,
91         &                surfQfile, surfQnetFile, surfQswFile,
92         &                lambdaThetaFile, lambdaSaltFile,
93       &                uVelInitFile, vVelInitFile, pSurfInitFile,       &                uVelInitFile, vVelInitFile, pSurfInitFile,
94       &                dQdTfile, ploadFile,       &                dQdTfile, ploadFile,
95         &                eddyTauxFile, eddyTauyFile,
96       &                eosType, pickupSuff,       &                eosType, pickupSuff,
97       &                mdsioLocalDir,       &                mdsioLocalDir,
98       &                the_run_name       &                the_run_name
99        CHARACTER*(5) checkPtSuff(maxNoChkptLev)        CHARACTER*(5) checkPtSuff(maxNoChkptLev)
100          CHARACTER*(MAX_LEN_FNAM) delXFile
101          CHARACTER*(MAX_LEN_FNAM) delYFile
102          CHARACTER*(MAX_LEN_FNAM) horizGridFile
103        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile
104        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile
105        CHARACTER*(MAX_LEN_FNAM) hydrogSaltFile        CHARACTER*(MAX_LEN_FNAM) hydrogSaltFile
# Line 97  C     the_run_name    :: string identify Line 111  C     the_run_name    :: string identify
111        CHARACTER*(MAX_LEN_FNAM) surfQnetFile        CHARACTER*(MAX_LEN_FNAM) surfQnetFile
112        CHARACTER*(MAX_LEN_FNAM) surfQswFile        CHARACTER*(MAX_LEN_FNAM) surfQswFile
113        CHARACTER*(MAX_LEN_FNAM) EmPmRfile        CHARACTER*(MAX_LEN_FNAM) EmPmRfile
114          CHARACTER*(MAX_LEN_FNAM) saltFluxFile
115        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation
116        CHARACTER*(MAX_LEN_FNAM) uVelInitFile        CHARACTER*(MAX_LEN_FNAM) uVelInitFile
117        CHARACTER*(MAX_LEN_FNAM) vVelInitFile        CHARACTER*(MAX_LEN_FNAM) vVelInitFile
118        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile
119        CHARACTER*(MAX_LEN_FNAM) dQdTfile        CHARACTER*(MAX_LEN_FNAM) dQdTfile
120        CHARACTER*(MAX_LEN_FNAM) ploadFile        CHARACTER*(MAX_LEN_FNAM) ploadFile
121          CHARACTER*(MAX_LEN_FNAM) eddyTauxFile
122          CHARACTER*(MAX_LEN_FNAM) eddyTauyFile
123          CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile
124          CHARACTER*(MAX_LEN_FNAM) lambdaSaltFile
125        CHARACTER*(MAX_LEN_FNAM) mdsioLocalDir        CHARACTER*(MAX_LEN_FNAM) mdsioLocalDir
126        CHARACTER*(MAX_LEN_FNAM) the_run_name        CHARACTER*(MAX_LEN_FNAM) the_run_name
127        CHARACTER*(6) eosType        CHARACTER*(6) eosType
# Line 132  C                           =0 Linear fr Line 151  C                           =0 Linear fr
151  C     select_rStar        :: option related to r* vertical coordinate  C     select_rStar        :: option related to r* vertical coordinate
152  C                           =0 (default) use r coord. ; > 0 use r*  C                           =0 (default) use r coord. ; > 0 use r*
153  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector
154  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector
155  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector
156  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector
157    C     selectKEscheme      :: Kinetic Energy scheme selector (Vector Inv.)
158  C     debugLevel          :: debug level selector: higher -> more writing  C     debugLevel          :: debug level selector: higher -> more writing
159    
160        COMMON /PARM_I/        COMMON /PARM_I/
# Line 149  C     debugLevel          :: debug level Line 169  C     debugLevel          :: debug level
169       &        nonlinFreeSurf, select_rStar,       &        nonlinFreeSurf, select_rStar,
170       &        tempAdvScheme, tempVertAdvScheme,       &        tempAdvScheme, tempVertAdvScheme,
171       &        saltAdvScheme, saltVertAdvScheme,       &        saltAdvScheme, saltVertAdvScheme,
172       &        tracerAdvScheme,       &        selectKEscheme,
173       &        debugLevel       &        debugLevel
174        INTEGER cg2dMaxIters        INTEGER cg2dMaxIters
175        INTEGER cg2dChkResFreq        INTEGER cg2dChkResFreq
# Line 168  C     debugLevel          :: debug level Line 188  C     debugLevel          :: debug level
188        INTEGER select_rStar        INTEGER select_rStar
189        INTEGER tempAdvScheme, tempVertAdvScheme        INTEGER tempAdvScheme, tempVertAdvScheme
190        INTEGER saltAdvScheme, saltVertAdvScheme        INTEGER saltAdvScheme, saltVertAdvScheme
191        INTEGER tracerAdvScheme        INTEGER selectKEscheme
192        INTEGER debugLevel        INTEGER debugLevel
193    
194  C  C
# Line 198  C     metricTerms   :: Flag which turns Line 218  C     metricTerms   :: Flag which turns
218  C     usingSphericalPolarMTerms :: If TRUE use spherical polar metric terms.  C     usingSphericalPolarMTerms :: If TRUE use spherical polar metric terms.
219  C     useNHMTerms :: If TRUE use non-hydrostatic metric terms.  C     useNHMTerms :: If TRUE use non-hydrostatic metric terms.
220  C     useCoriolis   :: Flag which turns the coriolis terms on and off.  C     useCoriolis   :: Flag which turns the coriolis terms on and off.
 C     tempDiffusion :: Flag which turns diffusion of temperature on  
 C                     and off.  
221  C     tempAdvection :: Flag which turns advection of temperature on  C     tempAdvection :: Flag which turns advection of temperature on
222  C                     and off.  C                     and off.
223  C     tempForcing   :: Flag which turns external forcing of temperature on  C     tempForcing   :: Flag which turns external forcing of temperature on
224  C                     and off.  C                     and off.
 C     saltDiffusion :: Flag which turns diffusion of salinity on  
 C                     and off.  
225  C     saltAdvection :: Flag which turns advection of salinity on  C     saltAdvection :: Flag which turns advection of salinity on
226  C                     and off.  C                     and off.
227  C     saltForcing   :: Flag which turns external forcing of salinity on  C     saltForcing   :: Flag which turns external forcing of salinity on
# Line 213  C                     and off. Line 229  C                     and off.
229  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux
230  C                         as a real Fresh Water (=> changes the Sea Level)  C                         as a real Fresh Water (=> changes the Sea Level)
231  C                         if F, converts P+R-E to salt flux (no SL effect)  C                         if F, converts P+R-E to salt flux (no SL effect)
232    C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable
233    C                       on irregular grids)
234    C     useAreaViscLength :: Set to true to use old scaling for viscous
235    C              lengths, e.g., L2=Raz.  May be preferable for cube sphere.
236    C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms
237  C     rigidLid            :: Set to true to use rigid lid  C     rigidLid            :: Set to true to use rigid lid
238  C     implicitFreeSurface :: Set to true to use implcit free surface  C     implicitFreeSurface :: Set to true to use implcit free surface
239  C     exactConserv        :: Set to true to conserve exactly the total Volume  C     exactConserv        :: Set to true to conserve exactly the total Volume
# Line 229  C     useJamartWetPoints :: Use wet-poin Line 250  C     useJamartWetPoints :: Use wet-poin
250  C     useJamartMomAdv :: Use wet-point method for V.I. non-linear term  C     useJamartMomAdv :: Use wet-point method for V.I. non-linear term
251  C     SadournyCoriolis :: use the enstrophy conserving scheme by Sadourny  C     SadournyCoriolis :: use the enstrophy conserving scheme by Sadourny
252  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term
253  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity in Coriolis  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity (V.I., advection)
254    C     upwindShear        :: use 1rst order upwind interp. (V.I., vertical advection)
255  C     useAbsVorticity :: work with f+zeta in Coriolis terms  C     useAbsVorticity :: work with f+zeta in Coriolis terms
256  C     implicitDiffusion :: Turns implicit vertical diffusion on  C     implicitDiffusion :: Turns implicit vertical diffusion on
257  C     implicitViscosity :: Turns implicit vertical viscosity on  C     implicitViscosity :: Turns implicit vertical viscosity on
# Line 240  C     multiDimAdvection :: Flag that ena Line 262  C     multiDimAdvection :: Flag that ena
262  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once
263  C     forcing_In_AB :: if False, put forcing (Temp,Salt,Tracers) contribution  C     forcing_In_AB :: if False, put forcing (Temp,Salt,Tracers) contribution
264  C                      out off Adams-Bashforth time stepping.  C                      out off Adams-Bashforth time stepping.
265    C     startFromPickupAB2 :: with AB-3 code, start from an AB-2 pickup
266  C     doThetaClimRelax :: Set true if relaxation to temperature  C     doThetaClimRelax :: Set true if relaxation to temperature
267  C                        climatology is required.  C                        climatology is required.
268  C     doSaltClimRelax  :: Set true if relaxation to salinity  C     doSaltClimRelax  :: Set true if relaxation to salinity
# Line 265  C                       useSingleCpuIO i Line 288  C                       useSingleCpuIO i
288  C                       outputs from master mpi process only.  C                       outputs from master mpi process only.
289  C     allowFreezing  :: Allows surface water to freeze and form ice  C     allowFreezing  :: Allows surface water to freeze and form ice
290  C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)  C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)
 C     groundAtK1  :: put the surface(k=1) at the Lower Boundary (=ground)  
291  C     pickup_write_mdsio :: use mdsio to write pickups  C     pickup_write_mdsio :: use mdsio to write pickups
292  C     pickup_read_mdsio  :: use mdsio to read  pickups  C     pickup_read_mdsio  :: use mdsio to read  pickups
293  C     pickup_write_immed :: echo the pickup immediately (for conversion)  C     pickup_write_immed :: echo the pickup immediately (for conversion)
294  C     timeave_mdsio      :: use mdsio for timeave output  C     timeave_mdsio      :: use mdsio for timeave output
295  C     snapshot_mdsio     :: use mdsio for "snapshot" (dumpfreq/diagfreq) output  C     snapshot_mdsio     :: use mdsio for "snapshot" (dumpfreq/diagfreq) output
296  C     monitor_stdio      :: use stdio for monitor output  C     monitor_stdio      :: use stdio for monitor output
297    C     calendarDumps :: When set, approximate months (30-31 days) and years (360-372 days)
298    C                      for parameters chkPtFreq, pChkPtFreq, taveFreq, SEAICE_taveFreq,
299    C                      KPP_taveFreq, and freq in pkg/diagnostics are converted to exact
300    C                      calendar months and years.  Requires pkg/cal.
301    C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)
302    C                        & Last iteration, in addition multiple of dumpFreq iter.
303        COMMON /PARM_L/ usingCartesianGrid, usingSphericalPolarGrid,        COMMON /PARM_L/ usingCartesianGrid, usingSphericalPolarGrid,
304       & usingCurvilinearGrid, usingCylindricalGrid,       & usingCurvilinearGrid, usingCylindricalGrid,
305       & no_slip_sides,no_slip_bottom,       & no_slip_sides,no_slip_bottom,
306       & staggerTimeStep,       & staggerTimeStep,
307       & momViscosity, momAdvection, momForcing, useCoriolis,       & momViscosity, momAdvection, momForcing, useCoriolis,
308       & momPressureForcing, vectorInvariantMomentum,       & momPressureForcing, vectorInvariantMomentum,
309       & tempDiffusion, tempAdvection, tempForcing,       & tempAdvection, tempForcing,
310       & saltDiffusion, saltAdvection, saltForcing,       & saltAdvection, saltForcing,
311       & useRealFreshWaterFlux,       & useRealFreshWaterFlux,
312         & useFullLeith, useStrainTensionVisc,
313         & useAreaViscLength,
314       & rigidLid, implicitFreeSurface, exactConserv, uniformLin_PhiSurf,       & rigidLid, implicitFreeSurface, exactConserv, uniformLin_PhiSurf,
315       & momStepping, tempStepping, saltStepping,       & momStepping, tempStepping, saltStepping,
316       & metricTerms, usingSphericalPolarMTerms, useNHMTerms,       & metricTerms, usingSphericalPolarMTerms, useNHMTerms,
# Line 288  C     monitor_stdio      :: use stdio fo Line 318  C     monitor_stdio      :: use stdio fo
318       & useCDscheme,       & useCDscheme,
319       & useEnergyConservingCoriolis, useJamartWetPoints, useJamartMomAdv,       & useEnergyConservingCoriolis, useJamartWetPoints, useJamartMomAdv,
320       & SadournyCoriolis, upwindVorticity, highOrderVorticity,       & SadournyCoriolis, upwindVorticity, highOrderVorticity,
321       & useAbsVorticity,       & useAbsVorticity, upwindShear,
322       & implicitDiffusion, implicitViscosity,       & implicitDiffusion, implicitViscosity,
323       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,
324       & multiDimAdvection, useMultiDimAdvec, forcing_In_AB,       & multiDimAdvection, useMultiDimAdvec, forcing_In_AB,
# Line 297  C     monitor_stdio      :: use stdio fo Line 327  C     monitor_stdio      :: use stdio fo
327       & fluidIsAir, fluidIsWater,       & fluidIsAir, fluidIsWater,
328       & usingPCoords, usingZCoords, useDynP_inEos_Zc, setCenterDr,       & usingPCoords, usingZCoords, useDynP_inEos_Zc, setCenterDr,
329       & nonHydrostatic, quasiHydrostatic, globalFiles, useSingleCpuIO,       & nonHydrostatic, quasiHydrostatic, globalFiles, useSingleCpuIO,
330       & allowFreezing, useOldFreezing, groundAtK1,       & allowFreezing, useOldFreezing,
331       & usePickupBeforeC35, usePickupBeforeC54, debugMode,       & usePickupBeforeC35, usePickupBeforeC54, startFromPickupAB2,
      & readPickupWithTracer, writePickupWithTracer,  
332       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,
333       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
334       & outputTypesInclusive       & outputTypesInclusive, dumpInitAndLast, debugMode,
335         & inAdMode, inAdTrue, inAdFalse, inAdExact,
336         & calendarDumps
337    
338        LOGICAL usingCartesianGrid        LOGICAL usingCartesianGrid
339        LOGICAL usingSphericalPolarGrid        LOGICAL usingSphericalPolarGrid
# Line 319  C     monitor_stdio      :: use stdio fo Line 350  C     monitor_stdio      :: use stdio fo
350        LOGICAL momPressureForcing        LOGICAL momPressureForcing
351        LOGICAL useCoriolis        LOGICAL useCoriolis
352        LOGICAL vectorInvariantMomentum        LOGICAL vectorInvariantMomentum
       LOGICAL tempDiffusion  
353        LOGICAL tempAdvection        LOGICAL tempAdvection
354        LOGICAL tempForcing        LOGICAL tempForcing
       LOGICAL saltDiffusion  
355        LOGICAL saltAdvection        LOGICAL saltAdvection
356        LOGICAL saltForcing        LOGICAL saltForcing
357        LOGICAL useRealFreshWaterFlux        LOGICAL useRealFreshWaterFlux
358          LOGICAL useFullLeith
359          LOGICAL useStrainTensionVisc
360          LOGICAL useAreaViscLength
361        LOGICAL rigidLid        LOGICAL rigidLid
362        LOGICAL implicitFreeSurface        LOGICAL implicitFreeSurface
363        LOGICAL exactConserv        LOGICAL exactConserv
# Line 345  C     monitor_stdio      :: use stdio fo Line 377  C     monitor_stdio      :: use stdio fo
377        LOGICAL upwindVorticity        LOGICAL upwindVorticity
378        LOGICAL highOrderVorticity        LOGICAL highOrderVorticity
379        LOGICAL useAbsVorticity        LOGICAL useAbsVorticity
380          LOGICAL upwindShear
381        LOGICAL implicitDiffusion        LOGICAL implicitDiffusion
382        LOGICAL implicitViscosity        LOGICAL implicitViscosity
383        LOGICAL tempImplVertAdv        LOGICAL tempImplVertAdv
# Line 369  C     monitor_stdio      :: use stdio fo Line 402  C     monitor_stdio      :: use stdio fo
402        LOGICAL useSingleCpuIO        LOGICAL useSingleCpuIO
403        LOGICAL allowFreezing        LOGICAL allowFreezing
404        LOGICAL useOldFreezing        LOGICAL useOldFreezing
       LOGICAL groundAtK1  
405        LOGICAL usePickupBeforeC35        LOGICAL usePickupBeforeC35
406        LOGICAL usePickupBeforeC54        LOGICAL usePickupBeforeC54
407          LOGICAL startFromPickupAB2
408          LOGICAL dumpInitAndLast
409        LOGICAL debugMode        LOGICAL debugMode
       LOGICAL readPickupWithTracer  
       LOGICAL writePickupWithTracer  
410        LOGICAL pickup_read_mdsio, pickup_write_mdsio        LOGICAL pickup_read_mdsio, pickup_write_mdsio
411        LOGICAL pickup_write_immed        LOGICAL pickup_write_immed
412        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio
413        LOGICAL outputTypesInclusive        LOGICAL outputTypesInclusive
414          LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact
415          LOGICAL calendarDumps
416    
417  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
418  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 413  C     rhoConst  :: Vertically constant r Line 447  C     rhoConst  :: Vertically constant r
447  C     rhoConstFresh :: Constant reference density for fresh water (rain)  C     rhoConstFresh :: Constant reference density for fresh water (rain)
448  C     tRef      :: reference vertical profile for potential temperature  C     tRef      :: reference vertical profile for potential temperature
449  C     sRef      :: reference vertical profile for salinity/specific humidity  C     sRef      :: reference vertical profile for salinity/specific humidity
 C     startTime :: Start time for model ( s )  
450  C     phiMin    :: Latitude of southern most cell face.  C     phiMin    :: Latitude of southern most cell face.
451  C     thetaMin  :: Longitude of western most cell face (this  C     thetaMin  :: Longitude of western most cell face (this
452  C                 is an "inert" parameter but it is included  C                 is an "inert" parameter but it is included
# Line 434  C     viscAr    :: Eddy viscosity coeff. Line 467  C     viscAr    :: Eddy viscosity coeff.
467  C                 momentum vertically ( units of r^2/s )  C                 momentum vertically ( units of r^2/s )
468  C     viscA4    :: Biharmonic viscosity coeff. for mixing of  C     viscA4    :: Biharmonic viscosity coeff. for mixing of
469  C                 momentum laterally ( m^4/s )  C                 momentum laterally ( m^4/s )
470  C     viscC2leith :: Leith non-dimensional viscosity factor  C     viscA4W   :: Biharmonic viscosity coeff. for mixing of vertical
471    C                 momentum laterally, no effect for hydrostatic
472    C                 model, defaults to viscA4 if unset ( m^2/s )
473    C     viscAhD   :: Eddy viscosity coeff. for mixing of momentum laterally
474    C                  (act on Divergence part) ( m^2/s )
475    C     viscAhZ   :: Eddy viscosity coeff. for mixing of momentum laterally
476    C                  (act on Vorticity  part) ( m^2/s )
477    C     viscA4D   :: Biharmonic viscosity coeff. for mixing of momentum laterally
478    C                  (act on Divergence part) ( m^4/s )
479    C     viscA4Z   :: Biharmonic viscosity coeff. for mixing of momentum laterally
480    C                  (act on Vorticity  part) ( m^4/s )
481    C     viscC2leith :: Leith non-dimensional viscosity factor (grad(vort))
482    C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))
483    C     viscC2smag  :: Smagorinsky non-dimensional viscosity factor (harmonic)
484    C     viscC4smag  :: Smagorinsky non-dimensional viscosity factor (biharmonic)
485  C     viscAhMax :: Maximum eddy viscosity coeff. for mixing of  C     viscAhMax :: Maximum eddy viscosity coeff. for mixing of
486  C                 momentum laterally ( m^2/s )  C                   momentum laterally ( m^2/s )
487    C     viscAhReMax :: Maximum gridscale Reynolds number for eddy viscosity
488    C                   coeff. for mixing of momentum laterally (non-dim)
489    C     viscAhGridMax:: maximum and minimum harmonic viscosity coefficients ...
490    C     viscAhGridMin::  in terms of non-dimensional grid-size dependent visc.
491  C     viscA4Max :: Maximum biharmonic viscosity coeff. for mixing of  C     viscA4Max :: Maximum biharmonic viscosity coeff. for mixing of
492  C                 momentum laterally ( m^4/s )  C                 momentum laterally ( m^4/s )
493    C     viscA4ReMax :: Maximum Gridscale Reynolds number for
494    C                  biharmonic viscosity coeff. momentum laterally (non-dim)
495  C     viscAhGrid:: non-dimensional grid-size dependent viscosity  C     viscAhGrid:: non-dimensional grid-size dependent viscosity
496  C     viscA4Grid:: non-dimensional grid-size dependent bi-harmonic viscosity  C     viscA4Grid:: non-dimensional grid-size dependent bi-harmonic viscosity
497  C     viscC4leith :: Leith non-dimensional viscosity factor  C     viscA4GridMax:: maximum and minimum biharmonic viscosity coefficients ...
498    C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity
499    C     viscC4leith :: Leith non-dimensional viscosity factor (grad(vort))
500    C     viscC4leithD :: Modified Leith non-dimensional viscosity factor (grad(div))
501  C     diffKhT   :: Laplacian diffusion coeff. for mixing of  C     diffKhT   :: Laplacian diffusion coeff. for mixing of
502  C                 heat laterally ( m^2/s )  C                 heat laterally ( m^2/s )
503  C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.  C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.
# Line 466  C                    it will be the deep Line 522  C                    it will be the deep
522  C                    Frequency of checkpointing and dumping of the model state  C                    Frequency of checkpointing and dumping of the model state
523  C                    are referenced to this clock. ( s )  C                    are referenced to this clock. ( s )
524  C     deltaTMom    :: Timestep for momemtum equations ( s )  C     deltaTMom    :: Timestep for momemtum equations ( s )
525  C     deltaTtracer :: Timestep for tracer equations ( s )  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k
526  C     deltaTfreesurf :: Timestep for free-surface equation ( s )  C     deltaTfreesurf :: Timestep for free-surface equation ( s )
527  C     freesurfFac  :: Parameter to turn implicit free surface term on or off  C     freesurfFac  :: Parameter to turn implicit free surface term on or off
528  C                    freesurfac = 1. uses implicit free surface  C                    freesurfac = 1. uses implicit free surface
529  C                    freesurfac = 0. uses rigid lid  C                    freesurfac = 0. uses rigid lid
530    C     abEps        :: Adams-Bashforth-2 stabilizing weight
531    C     alph_AB      :: Adams-Bashforth-3 primary factor
532    C     beta_AB      :: Adams-Bashforth-3 secondary factor
533  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :
534  C                     Implicit part of Surface Pressure Gradient ( 0-1 )  C                     Implicit part of Surface Pressure Gradient ( 0-1 )
535  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :
# Line 483  C     hFacInf      :: Threshold (inf and Line 542  C     hFacInf      :: Threshold (inf and
542  C     hFacSup        that control vanishing and creating levels  C     hFacSup        that control vanishing and creating levels
543  C     tauCD        :: CD scheme coupling timescale ( 1/s )  C     tauCD        :: CD scheme coupling timescale ( 1/s )
544  C     rCD          :: CD scheme normalised coupling parameter ( 0-1 )  C     rCD          :: CD scheme normalised coupling parameter ( 0-1 )
545    C     baseTime      :: model base time (time origin) = time @ iteration zero
546  C     startTime     :: Starting time for this integration ( s ).  C     startTime     :: Starting time for this integration ( s ).
547  C     endTime       :: Ending time for this integration ( s ).  C     endTime       :: Ending time for this integration ( s ).
548  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).
# Line 506  C     tave_lastIter :: (for state variab Line 566  C     tave_lastIter :: (for state variab
566  C                      step (of each taveFreq period) put in the time average.  C                      step (of each taveFreq period) put in the time average.
567  C                      (fraction for 1rst iter = 1 - tave_lastIter)  C                      (fraction for 1rst iter = 1 - tave_lastIter)
568  C     tauThetaClimRelax :: Relaxation to climatology time scale ( s ).  C     tauThetaClimRelax :: Relaxation to climatology time scale ( s ).
 C     lambdaThetaClimRelax :: Inverse time scale for relaxation ( 1/s ).  
569  C     tauSaltClimRelax :: Relaxation to climatology time scale ( s ).  C     tauSaltClimRelax :: Relaxation to climatology time scale ( s ).
 C     lambdaSaltClimRelax :: Inverse time scale for relaxation ( 1/s ).  
570  C     latBandClimRelax :: latitude band where Relaxation to Clim. is applied,  C     latBandClimRelax :: latitude band where Relaxation to Clim. is applied,
571  C                         i.e. where |yC| <= latBandClimRelax  C                         i.e. where |yC| <= latBandClimRelax
572  C     externForcingPeriod :: Is the period of which forcing varies (eg. 1 month)  C     externForcingPeriod :: Is the period of which forcing varies (eg. 1 month)
# Line 519  C     convertFW2Salt :: salinity, used t Line 577  C     convertFW2Salt :: salinity, used t
577  C                       (use model surface (local) value if set to -1)  C                       (use model surface (local) value if set to -1)
578  C     temp_EvPrRn :: temperature of Rain & Evap.  C     temp_EvPrRn :: temperature of Rain & Evap.
579  C     salt_EvPrRn :: salinity of Rain & Evap.  C     salt_EvPrRn :: salinity of Rain & Evap.
 C     trac_EvPrRn :: tracer concentration in Rain & Evap.  
580  C        (notes: a) tracer content of Rain/Evap only used if both  C        (notes: a) tracer content of Rain/Evap only used if both
581  C                     NonLin_FrSurf & useRealFreshWater are set.  C                     NonLin_FrSurf & useRealFreshWater are set.
582  C                b) use model surface (local) value if set to UNSET_RL)  C                b) use model surface (local) value if set to UNSET_RL)
# Line 533  C      --"-"--  Quadratic  ( linear: 1/s Line 590  C      --"-"--  Quadratic  ( linear: 1/s
590        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,
591       & cg2dpcOffDFac, cg3dTargetResidual,       & cg2dpcOffDFac, cg3dTargetResidual,
592       & delR, delRc, delX, delY,       & delR, delRc, delX, delY,
593       & deltaT, deltaTmom, deltaTtracer, deltaTfreesurf, deltaTClock,       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,
594       & abeps, startTime,       & abEps, alph_AB, beta_AB,
595       & phiMin, thetaMin, rSphere, recip_RSphere, f0, beta,       & phiMin, thetaMin, rSphere, recip_RSphere, f0, beta,
596       & fCori, fCoriG, fCoriCos,       & viscAh, viscAhW, viscAhMax,
597       & viscAh, viscAhW, viscAhMax, viscAhGrid, viscC2leith,       & viscAhGrid, viscAhGridMax, viscAhGridMin,
598       & viscA4,  viscA4Max, viscA4Grid, viscC4leith,       & viscC2leith, viscC2leithD,
599       & viscAr, viscAstrain, viscAtension,       & viscC2smag, viscC4smag,
600         & viscAhD, viscAhZ, viscA4D, viscA4Z,
601         & viscA4, viscA4W,
602         & viscA4Max, viscA4Grid, viscA4GridMax, viscA4GridMin,
603         & viscAhRemax, viscA4Remax,
604         & viscC4leith, viscC4leithD, viscAr,
605       & diffKhT, diffK4T, diffKrNrT,       & diffKhT, diffK4T, diffKrNrT,
606       & diffKhS, diffK4S, diffKrNrS,       & diffKhS, diffK4S, diffKrNrS,
607       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,
# Line 548  C      --"-"--  Quadratic  ( linear: 1/s Line 610  C      --"-"--  Quadratic  ( linear: 1/s
610       & gravity, recip_Gravity, gBaro, rhonil, recip_rhonil,       & gravity, recip_Gravity, gBaro, rhonil, recip_rhonil,
611       & recip_rhoConst, rhoConst,       & recip_rhoConst, rhoConst,
612       & rhoConstFresh, convertEmP2rUnit, tRef, sRef,       & rhoConstFresh, convertEmP2rUnit, tRef, sRef,
613       & endTime, chkPtFreq, pchkPtFreq, dumpFreq, adjDumpFreq,       & baseTime, startTime, endTime,
614       & diagFreq, taveFreq, tave_lastIter, monitorFreq,       & chkPtFreq, pchkPtFreq, dumpFreq, adjDumpFreq,
615         & diagFreq, taveFreq, tave_lastIter, monitorFreq, adjMonitorFreq,
616       & afFacMom, vfFacMom, pfFacMom, cfFacMom, foFacMom, mtFacMom,       & afFacMom, vfFacMom, pfFacMom, cfFacMom, foFacMom, mtFacMom,
617       & cosPower, cAdjFreq, omega, rotationPeriod,       & cosPower, cAdjFreq, omega, rotationPeriod,
618       & tauThetaClimRelax, lambdaThetaClimRelax,       & tauThetaClimRelax,
619       & tauSaltClimRelax, lambdaSaltClimRelax,       & tauSaltClimRelax,
620       & tauTr1ClimRelax, lambdaTr1ClimRelax, latBandClimRelax,       & tauTr1ClimRelax, lambdaTr1ClimRelax, latBandClimRelax,
621       & externForcingCycle, externForcingPeriod,       & externForcingCycle, externForcingPeriod,
622       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn, trac_EvPrRn,       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,
623       & hFacMinDr, hFacMinDp,       & hFacMinDr, hFacMinDp,
624       & horiVertRatio, recip_horiVertRatio,       & horiVertRatio, recip_horiVertRatio,
625       & ivdc_kappa, Ro_SeaLevel,       & ivdc_kappa, Ro_SeaLevel,
626       & bottomDragLinear,bottomDragQuadratic,       & bottomDragLinear,bottomDragQuadratic,nh_Am2,
627       & tCyl       & tCylIn, tCylOut
628    
629          _RL nh_Am2
630        _RL cg2dTargetResidual        _RL cg2dTargetResidual
631        _RL cg2dTargetResWunit        _RL cg2dTargetResWunit
632        _RL cg3dTargetResidual        _RL cg3dTargetResidual
# Line 574  C      --"-"--  Quadratic  ( linear: 1/s Line 638  C      --"-"--  Quadratic  ( linear: 1/s
638        _RL deltaT        _RL deltaT
639        _RL deltaTClock        _RL deltaTClock
640        _RL deltaTmom        _RL deltaTmom
641        _RL deltaTtracer        _RL dTtracerLev(Nr)
642        _RL deltaTfreesurf        _RL deltaTfreesurf
643        _RL abeps        _RL abEps, alph_AB, beta_AB
644        _RL phiMin        _RL phiMin
645        _RL thetaMin        _RL thetaMin
646        _RL rSphere        _RL rSphere
# Line 594  C      --"-"--  Quadratic  ( linear: 1/s Line 658  C      --"-"--  Quadratic  ( linear: 1/s
658        _RL beta        _RL beta
659        _RL viscAh        _RL viscAh
660        _RL viscAhW        _RL viscAhW
661          _RL viscAhD
662          _RL viscAhZ
663        _RL viscAhMax        _RL viscAhMax
664          _RL viscAhReMax
665        _RL viscAhGrid        _RL viscAhGrid
666          _RL viscAhGridMax
667          _RL viscAhGridMin
668        _RL viscC2leith        _RL viscC2leith
669        _RL viscAstrain        _RL viscC2leithD
670        _RL viscAtension        _RL viscC2smag
671          _RL viscC4smag
672        _RL viscAr        _RL viscAr
673        _RL viscA4        _RL viscA4
674          _RL viscA4W
675          _RL viscA4D
676          _RL viscA4Z
677        _RL viscA4Max        _RL viscA4Max
678        _RL viscA4Grid        _RL viscA4ReMax
679          _RL viscA4Grid, viscA4GridMax, viscA4GridMin
680        _RL viscC4leith        _RL viscC4leith
681          _RL viscC4leithD
682        _RL diffKhT        _RL diffKhT
683        _RL diffKrNrT(Nr)        _RL diffKrNrT(Nr)
684        _RL diffK4T        _RL diffK4T
# Line 628  C      --"-"--  Quadratic  ( linear: 1/s Line 703  C      --"-"--  Quadratic  ( linear: 1/s
703        _RL convertEmP2rUnit        _RL convertEmP2rUnit
704        _RL tRef(Nr)        _RL tRef(Nr)
705        _RL sRef(Nr)        _RL sRef(Nr)
706        _RS fCori(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx,nSy)        _RL baseTime
       _RS fCoriG(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx,nSy)  
       _RS fCoriCos(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx,nSy)  
707        _RL startTime        _RL startTime
708        _RL endTime        _RL endTime
709        _RL chkPtFreq        _RL chkPtFreq
# Line 641  C      --"-"--  Quadratic  ( linear: 1/s Line 714  C      --"-"--  Quadratic  ( linear: 1/s
714        _RL taveFreq        _RL taveFreq
715        _RL tave_lastIter        _RL tave_lastIter
716        _RL monitorFreq        _RL monitorFreq
717          _RL adjMonitorFreq
718        _RL afFacMom        _RL afFacMom
719        _RL vfFacMom        _RL vfFacMom
720        _RL pfFacMom        _RL pfFacMom
# Line 652  C      --"-"--  Quadratic  ( linear: 1/s Line 726  C      --"-"--  Quadratic  ( linear: 1/s
726        _RL omega        _RL omega
727        _RL rotationPeriod        _RL rotationPeriod
728        _RL tauThetaClimRelax        _RL tauThetaClimRelax
       _RL lambdaThetaClimRelax  
729        _RL tauSaltClimRelax        _RL tauSaltClimRelax
       _RL lambdaSaltClimRelax  
730        _RL tauTr1ClimRelax        _RL tauTr1ClimRelax
731        _RL lambdaTr1ClimRelax        _RL lambdaTr1ClimRelax
732        _RL latBandClimRelax        _RL latBandClimRelax
# Line 663  C      --"-"--  Quadratic  ( linear: 1/s Line 735  C      --"-"--  Quadratic  ( linear: 1/s
735        _RL convertFW2Salt        _RL convertFW2Salt
736        _RL temp_EvPrRn        _RL temp_EvPrRn
737        _RL salt_EvPrRn        _RL salt_EvPrRn
       _RL trac_EvPrRn  
738        _RL horiVertRatio        _RL horiVertRatio
739        _RL recip_horiVertRatio        _RL recip_horiVertRatio
740        _RL ivdc_kappa        _RL ivdc_kappa
741        _RL Ro_SeaLevel        _RL Ro_SeaLevel
742        _RL bottomDragLinear        _RL bottomDragLinear
743        _RL bottomDragQuadratic        _RL bottomDragQuadratic
744        _RL tCyl        _RL tCylIn
745          _RL tCylOut
746    
747  C--   COMMON /PARM_A/ Thermodynamics constants ?  C--   COMMON /PARM_A/ Thermodynamics constants ?
748        COMMON /PARM_A/ HeatCapacity_Cp,recip_Cp        COMMON /PARM_A/ HeatCapacity_Cp,recip_Cp
# Line 713  C Logical flags for selecting packages Line 785  C Logical flags for selecting packages
785        LOGICAL useZONAL_FILT        LOGICAL useZONAL_FILT
786        LOGICAL useFLT        LOGICAL useFLT
787        LOGICAL usePTRACERS        LOGICAL usePTRACERS
788          LOGICAL useGCHEM
789        LOGICAL useSBO        LOGICAL useSBO
790        LOGICAL useSEAICE        LOGICAL useSEAICE
791        LOGICAL useBulkForce        LOGICAL useBulkForce
# Line 722  C Logical flags for selecting packages Line 795  C Logical flags for selecting packages
795        LOGICAL usediagnostics        LOGICAL usediagnostics
796        LOGICAL useEBM        LOGICAL useEBM
797        LOGICAL useMNC        LOGICAL useMNC
798          LOGICAL useMATRIX
799          LOGICAL useRunClock
800        COMMON /PARM_PACKAGES/        COMMON /PARM_PACKAGES/
801       &        useKPP, useGMRedi, useOBCS, useAIM, useLand, useECCO,       &        useKPP, useGMRedi, useOBCS, useAIM, useLand, useECCO,
802       &        useSHAP_FILT, useZONAL_FILT, useGrdchk, useFLT,       &        useSHAP_FILT, useZONAL_FILT, useGrdchk, useFLT,
803       &        usePTRACERS,  useSBO, useSEAICE, useThSIce, useBulkForce,       &        usePTRACERS, useGCHEM,
804       &        usefizhi,  usegridalt, usediagnostics, useEBM, useMNC,       &        useSBO, useSEAICE, useThSIce, useBulkForce,
805       &        usePP81, useMY82, useOPPS, useGGL90       &        usefizhi, usegridalt, usediagnostics, useEBM, useMNC,
806         &        usePP81, useMY82, useOPPS, useGGL90, useMATRIX,
807         &        useRunClock
808    
809  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
810  CEH3 ;;; mode:fortran ***  CEH3 ;;; mode:fortran ***
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