/[MITgcm]/MITgcm/model/inc/PARAMS.h
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revision 1.256 by jmc, Mon Dec 12 18:58:51 2011 UTC revision 1.287 by jmc, Tue May 2 18:11:05 2017 UTC
# Line 14  C     here. Notes describing the paramet Line 14  C     here. Notes describing the paramet
14    
15  CEOP  CEOP
16    
 C     Macros for special grid options  
 #include "PARAMS_MACROS.h"  
   
17  C--   Contants  C--   Contants
18  C     Useful physical values  C     Useful physical values
19        Real*8 PI        Real*8 PI
# Line 36  C                        (+ 4 digits Pro Line 33  C                        (+ 4 digits Pro
33  C     adTapeDir       :: read-write checkpointing tape files from/to this  C     adTapeDir       :: read-write checkpointing tape files from/to this
34  C                        directory name instead of current dir. Conflicts  C                        directory name instead of current dir. Conflicts
35  C                        mdsioLocalDir, so only one of the two can be set.  C                        mdsioLocalDir, so only one of the two can be set.
 C                        In contrast to mdsioLocalDir, if specified adTapeDir  
 C                        must exist before the model starts.  
36  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)  C     tRefFile      :: File containing reference Potential Temperat.  tRef (1.D)
37  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)  C     sRefFile      :: File containing reference salinity/spec.humid. sRef (1.D)
38  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)  C     rhoRefFile    :: File containing reference density profile rhoRef (1.D)
39    C     gravityFile   :: File containing gravity vertical profile (1.D)
40  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)  C     delRFile      :: File containing vertical grid spacing delR  (1.D array)
41  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)  C     delRcFile     :: File containing vertical grid spacing delRc (1.D array)
42  C     hybSigmFile   :: File containing hybrid-sigma vertical coord. coeff. (2x 1.D)  C     hybSigmFile   :: File containing hybrid-sigma vertical coord. coeff. (2x 1.D)
# Line 52  C     bathyFile       :: File containing Line 48  C     bathyFile       :: File containing
48  C                        is taken from inline function.  C                        is taken from inline function.
49  C     topoFile        :: File containing the topography of the surface (unit=m)  C     topoFile        :: File containing the topography of the surface (unit=m)
50  C                        (mainly used for the atmosphere = ground height).  C                        (mainly used for the atmosphere = ground height).
51    C     addWwallFile    :: File containing 2-D additional Western  cell-edge wall
52    C     addSwallFile    :: File containing 2-D additional Southern cell-edge wall
53    C                        (e.g., to add "thin-wall" where it is =1)
54  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)  C     hydrogThetaFile :: File containing initial hydrographic data (3-D)
55  C                        for potential temperature.  C                        for potential temperature.
56  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)  C     hydrogSaltFile  :: File containing initial hydrographic data (3-D)
# Line 64  C     viscA4Zfile     :: File containing Line 63  C     viscA4Zfile     :: File containing
63  C     zonalWindFile   :: File containing zonal wind data  C     zonalWindFile   :: File containing zonal wind data
64  C     meridWindFile   :: File containing meridional wind data  C     meridWindFile   :: File containing meridional wind data
65  C     thetaClimFile   :: File containing surface theta climataology used  C     thetaClimFile   :: File containing surface theta climataology used
66  C                       in relaxation term -lambda(theta-theta*)  C                        in relaxation term -lambda(theta-theta*)
67  C     saltClimFile    :: File containing surface salt climataology used  C     saltClimFile    :: File containing surface salt climataology used
68  C                       in relaxation term -lambda(salt-salt*)  C                        in relaxation term -lambda(salt-salt*)
69  C     surfQfile       :: File containing surface heat flux, excluding SW  C     surfQfile       :: File containing surface heat flux, excluding SW
70  C                        (old version, kept for backward compatibility)  C                        (old version, kept for backward compatibility)
71  C     surfQnetFile    :: File containing surface net heat flux  C     surfQnetFile    :: File containing surface net heat flux
72  C     surfQswFile     :: File containing surface shortwave radiation  C     surfQswFile     :: File containing surface shortwave radiation
 C     dQdTfile        :: File containing thermal relaxation coefficient  
73  C     EmPmRfile       :: File containing surface fresh water flux  C     EmPmRfile       :: File containing surface fresh water flux
74  C           NOTE: for backward compatibility EmPmRfile is specified in  C           NOTE: for backward compatibility EmPmRfile is specified in
75  C                 m/s when using external_fields_load.F.  It is converted  C                 m/s when using external_fields_load.F.  It is converted
76  C                 to kg/m2/s by multiplying by rhoConstFresh.  C                 to kg/m2/s by multiplying by rhoConstFresh.
77  C     saltFluxFile    :: File containing surface salt flux  C     saltFluxFile    :: File containing surface salt flux
78  C     pLoadFile       :: File containing pressure loading  C     pLoadFile       :: File containing pressure loading
79    C     addMassFile     :: File containing source/sink of fluid in the interior
80  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data  C     eddyPsiXFile    :: File containing zonal Eddy streamfunction data
81  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data  C     eddyPsiYFile    :: File containing meridional Eddy streamfunction data
82  C     the_run_name    :: string identifying the name of the model "run"  C     the_run_name    :: string identifying the name of the model "run"
83        COMMON /PARM_C/        COMMON /PARM_C/
84       &                buoyancyRelation, eosType,       &                buoyancyRelation, eosType,
85       &                pickupSuff, mdsioLocalDir, adTapeDir,       &                pickupSuff, mdsioLocalDir, adTapeDir,
86       &                tRefFile, sRefFile, rhoRefFile,       &                tRefFile, sRefFile, rhoRefFile, gravityFile,
87       &                delRFile, delRcFile, hybSigmFile,       &                delRFile, delRcFile, hybSigmFile,
88       &                delXFile, delYFile, horizGridFile,       &                delXFile, delYFile, horizGridFile,
89       &                bathyFile, topoFile,       &                bathyFile, topoFile, addWwallFile, addSwallFile,
90       &                viscAhDfile, viscAhZfile,       &                viscAhDfile, viscAhZfile,
91       &                viscA4Dfile, viscA4Zfile,       &                viscA4Dfile, viscA4Zfile,
92       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,       &                hydrogThetaFile, hydrogSaltFile, diffKrFile,
# Line 97  C     the_run_name    :: string identify Line 96  C     the_run_name    :: string identify
96       &                surfQfile, surfQnetFile, surfQswFile,       &                surfQfile, surfQnetFile, surfQswFile,
97       &                lambdaThetaFile, lambdaSaltFile,       &                lambdaThetaFile, lambdaSaltFile,
98       &                uVelInitFile, vVelInitFile, pSurfInitFile,       &                uVelInitFile, vVelInitFile, pSurfInitFile,
99       &                dQdTfile, ploadFile,       &                pLoadFile, addMassFile,
100       &                eddyPsiXFile, eddyPsiYFile,       &                eddyPsiXFile, eddyPsiYFile, geothermalFile,
101       &                the_run_name       &                the_run_name
102        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation        CHARACTER*(MAX_LEN_FNAM) buoyancyRelation
103        CHARACTER*(6)  eosType        CHARACTER*(6)  eosType
# Line 108  C     the_run_name    :: string identify Line 107  C     the_run_name    :: string identify
107        CHARACTER*(MAX_LEN_FNAM) tRefFile        CHARACTER*(MAX_LEN_FNAM) tRefFile
108        CHARACTER*(MAX_LEN_FNAM) sRefFile        CHARACTER*(MAX_LEN_FNAM) sRefFile
109        CHARACTER*(MAX_LEN_FNAM) rhoRefFile        CHARACTER*(MAX_LEN_FNAM) rhoRefFile
110          CHARACTER*(MAX_LEN_FNAM) gravityFile
111        CHARACTER*(MAX_LEN_FNAM) delRFile        CHARACTER*(MAX_LEN_FNAM) delRFile
112        CHARACTER*(MAX_LEN_FNAM) delRcFile        CHARACTER*(MAX_LEN_FNAM) delRcFile
113        CHARACTER*(MAX_LEN_FNAM) hybSigmFile        CHARACTER*(MAX_LEN_FNAM) hybSigmFile
# Line 115  C     the_run_name    :: string identify Line 115  C     the_run_name    :: string identify
115        CHARACTER*(MAX_LEN_FNAM) delYFile        CHARACTER*(MAX_LEN_FNAM) delYFile
116        CHARACTER*(MAX_LEN_FNAM) horizGridFile        CHARACTER*(MAX_LEN_FNAM) horizGridFile
117        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile        CHARACTER*(MAX_LEN_FNAM) bathyFile, topoFile
118          CHARACTER*(MAX_LEN_FNAM) addWwallFile, addSwallFile
119        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile        CHARACTER*(MAX_LEN_FNAM) hydrogThetaFile, hydrogSaltFile
120        CHARACTER*(MAX_LEN_FNAM) diffKrFile        CHARACTER*(MAX_LEN_FNAM) diffKrFile
121        CHARACTER*(MAX_LEN_FNAM) viscAhDfile        CHARACTER*(MAX_LEN_FNAM) viscAhDfile
# Line 133  C     the_run_name    :: string identify Line 134  C     the_run_name    :: string identify
134        CHARACTER*(MAX_LEN_FNAM) uVelInitFile        CHARACTER*(MAX_LEN_FNAM) uVelInitFile
135        CHARACTER*(MAX_LEN_FNAM) vVelInitFile        CHARACTER*(MAX_LEN_FNAM) vVelInitFile
136        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile        CHARACTER*(MAX_LEN_FNAM) pSurfInitFile
137        CHARACTER*(MAX_LEN_FNAM) dQdTfile        CHARACTER*(MAX_LEN_FNAM) pLoadFile
138        CHARACTER*(MAX_LEN_FNAM) ploadFile        CHARACTER*(MAX_LEN_FNAM) addMassFile
139        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiXFile
140        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile        CHARACTER*(MAX_LEN_FNAM) eddyPsiYFile
141          CHARACTER*(MAX_LEN_FNAM) geothermalFile
142        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile        CHARACTER*(MAX_LEN_FNAM) lambdaThetaFile
143        CHARACTER*(MAX_LEN_FNAM) lambdaSaltFile        CHARACTER*(MAX_LEN_FNAM) lambdaSaltFile
144        CHARACTER*(MAX_LEN_PREC/2) the_run_name        CHARACTER*(MAX_LEN_PREC/2) the_run_name
145    
146  C--   COMMON /PARM_I/ Integer valued parameters used by the model.  C--   COMMON /PARM_I/ Integer valued parameters used by the model.
147  C     cg2dMaxIters        :: Maximum number of iterations in the  C     cg2dMaxIters        :: Maximum number of iterations in the
148  C                           two-dimensional con. grad solver.  C                            two-dimensional con. grad solver.
149  C     cg2dChkResFreq      :: Frequency with which to check residual  C     cg2dChkResFreq      :: Frequency with which to check residual
150  C                           in con. grad solver.  C                            in con. grad solver.
151  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner  C     cg2dPreCondFreq     :: Frequency for updating cg2d preconditioner
152  C                            (non-linear free-surf.)  C                            (non-linear free-surf.)
153    C     cg2dUseMinResSol    :: =0 : use last-iteration/converged solution
154    C                            =1 : use solver minimum-residual solution
155  C     cg3dMaxIters        :: Maximum number of iterations in the  C     cg3dMaxIters        :: Maximum number of iterations in the
156  C                           three-dimensional con. grad solver.  C                            three-dimensional con. grad solver.
157  C     cg3dChkResFreq      :: Frequency with which to check residual  C     cg3dChkResFreq      :: Frequency with which to check residual
158  C                           in con. grad solver.  C                            in con. grad solver.
159  C     printResidualFreq   :: Frequency for printing residual in CG iterations  C     printResidualFreq   :: Frequency for printing residual in CG iterations
160  C     nIter0              :: Start time-step number of for this run  C     nIter0              :: Start time-step number of for this run
161  C     nTimeSteps          :: Number of timesteps to execute  C     nTimeSteps          :: Number of timesteps to execute
162  C     writeStatePrec      :: Precision used for writing model state.  C     nTimeSteps_l2       :: Number of inner timesteps to execute per timestep
 C     writeBinaryPrec     :: Precision used for writing binary files  
 C     readBinaryPrec      :: Precision used for reading binary files  
163  C     selectCoriMap       :: select setting of Coriolis parameter map:  C     selectCoriMap       :: select setting of Coriolis parameter map:
164  C                           =0 f-Plane (Constant Coriolis, = f0)  C                           =0 f-Plane (Constant Coriolis, = f0)
165  C                           =1 Beta-Plane Coriolis (= f0 + beta.y)  C                           =1 Beta-Plane Coriolis (= f0 + beta.y)
# Line 170  C     select_rStar        :: option rela Line 172  C     select_rStar        :: option rela
172  C                           =0 (default) use r coord. ; > 0 use r*  C                           =0 (default) use r coord. ; > 0 use r*
173  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:  C     selectNHfreeSurf    :: option for Non-Hydrostatic (free-)Surface formulation:
174  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.  C                           =0 (default) hydrostatic surf. ; > 0 add NH effects.
175    C     selectP_inEOS_Zc    :: select which pressure to use in EOS (for z-coords)
176    C                           =0: simply: -g*rhoConst*z
177    C                           =1: use pRef = integral{-g*rho(Tref,Sref,pRef)*dz}
178    C                           =2: use hydrostatic dynamical pressure
179    C                           =3: use full (Hyd+NH) dynamical pressure
180  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior  C     selectAddFluid      :: option to add mass source/sink of fluid in the interior
181  C                            (3-D generalisation of oceanic real-fresh water flux)  C                            (3-D generalisation of oceanic real-fresh water flux)
182  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)  C                           =0 off ; =1 add fluid ; =-1 virtual flux (no mass added)
183    C     selectImplicitDrag  :: select Implicit treatment of bottom/top drag
184    C                           = 0: fully explicit
185    C                           = 1: implicit on provisional velocity
186    C                                (i.e., before grad.Eta increment)
187    C                           = 2: fully implicit (combined with Impl Surf.Press)
188  C     momForcingOutAB     :: =1: take momentum forcing contribution  C     momForcingOutAB     :: =1: take momentum forcing contribution
189  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
190  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution  C     tracForcingOutAB    :: =1: take tracer (Temp,Salt,pTracers) forcing contribution
191  C                           out of (=0: in) Adams-Bashforth time stepping.  C                            out of (=0: in) Adams-Bashforth time stepping.
192  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector  C     tempAdvScheme       :: Temp. Horiz.Advection scheme selector
193  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector  C     tempVertAdvScheme   :: Temp. Vert. Advection scheme selector
194  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector  C     saltAdvScheme       :: Salt. Horiz.advection scheme selector
195  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector  C     saltVertAdvScheme   :: Salt. Vert. Advection scheme selector
196  C     selectKEscheme      :: Kinetic Energy scheme selector (Vector Inv.)  C     selectKEscheme      :: Kinetic Energy scheme selector (Vector Inv.)
197  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)  C     selectVortScheme    :: Scheme selector for Vorticity term (Vector Inv.)
198    C     selectBotDragQuadr  :: quadratic bottom drag discretisation option:
199    C                           =0: average KE from grid center to U & V location
200    C                           =1: use local velocity norm @ U & V location
201    C                           =2: same with wet-point averaging of other component
202    C     readBinaryPrec      :: Precision used for reading binary files
203    C     writeStatePrec      :: Precision used for writing model state.
204    C     writeBinaryPrec     :: Precision used for writing binary files
205    C     rwSuffixType        :: controls the format of the mds file suffix.
206    C                          =0 (default): use iteration number (myIter, I10.10);
207    C                          =1: 100*myTime (100th sec); =2: myTime (seconds);
208    C                          =3: myTime/360 (10th of hr); =4: myTime/3600 (hours).
209  C     monitorSelect       :: select group of variables to monitor  C     monitorSelect       :: select group of variables to monitor
210  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface  C                            =1 : dynvars ; =2 : + vort ; =3 : + surface
211  C-    debugLevel          :: controls printing of algorithm intermediate results  C-    debugLevel          :: controls printing of algorithm intermediate results
212  C                            and statistics ; higher -> more writing  C                            and statistics ; higher -> more writing
213    C-    plotLevel           :: controls printing of field maps ; higher -> more flds
214    
215        COMMON /PARM_I/        COMMON /PARM_I/
216       &        cg2dMaxIters, cg2dChkResFreq, cg2dPreCondFreq,       &        cg2dMaxIters, cg2dChkResFreq,
217         &        cg2dPreCondFreq, cg2dUseMinResSol,
218       &        cg3dMaxIters, cg3dChkResFreq,       &        cg3dMaxIters, cg3dChkResFreq,
219       &        printResidualFreq,       &        printResidualFreq,
220       &        nIter0, nTimeSteps, nEndIter,       &        nIter0, nTimeSteps, nTimeSteps_l2, nEndIter,
      &        writeStatePrec,  
      &        writeBinaryPrec, readBinaryPrec,  
221       &        selectCoriMap,       &        selectCoriMap,
222       &        selectSigmaCoord,       &        selectSigmaCoord,
223       &        nonlinFreeSurf, select_rStar,       &        nonlinFreeSurf, select_rStar,
224       &        selectNHfreeSurf,       &        selectNHfreeSurf, selectP_inEOS_Zc,
225       &        selectAddFluid,       &        selectAddFluid, selectImplicitDrag,
226       &        momForcingOutAB, tracForcingOutAB,       &        momForcingOutAB, tracForcingOutAB,
227       &        tempAdvScheme, tempVertAdvScheme,       &        tempAdvScheme, tempVertAdvScheme,
228       &        saltAdvScheme, saltVertAdvScheme,       &        saltAdvScheme, saltVertAdvScheme,
229       &        selectKEscheme, selectVortScheme,       &        selectKEscheme, selectVortScheme,
230       &        monitorSelect, debugLevel       &        selectBotDragQuadr,
231         &        readBinaryPrec, writeBinaryPrec, writeStatePrec,
232         &        rwSuffixType, monitorSelect, debugLevel, plotLevel
233        INTEGER cg2dMaxIters        INTEGER cg2dMaxIters
234        INTEGER cg2dChkResFreq        INTEGER cg2dChkResFreq
235        INTEGER cg2dPreCondFreq        INTEGER cg2dPreCondFreq
236          INTEGER cg2dUseMinResSol
237        INTEGER cg3dMaxIters        INTEGER cg3dMaxIters
238        INTEGER cg3dChkResFreq        INTEGER cg3dChkResFreq
239        INTEGER printResidualFreq        INTEGER printResidualFreq
240        INTEGER nIter0        INTEGER nIter0
241        INTEGER nTimeSteps        INTEGER nTimeSteps
242          INTEGER nTimeSteps_l2
243        INTEGER nEndIter        INTEGER nEndIter
       INTEGER writeStatePrec  
       INTEGER writeBinaryPrec  
       INTEGER readBinaryPrec  
244        INTEGER selectCoriMap        INTEGER selectCoriMap
245        INTEGER selectSigmaCoord        INTEGER selectSigmaCoord
246        INTEGER nonlinFreeSurf        INTEGER nonlinFreeSurf
247        INTEGER select_rStar        INTEGER select_rStar
248        INTEGER selectNHfreeSurf        INTEGER selectNHfreeSurf
249          INTEGER selectP_inEOS_Zc
250        INTEGER selectAddFluid        INTEGER selectAddFluid
251          INTEGER selectImplicitDrag
252        INTEGER momForcingOutAB, tracForcingOutAB        INTEGER momForcingOutAB, tracForcingOutAB
253        INTEGER tempAdvScheme, tempVertAdvScheme        INTEGER tempAdvScheme, tempVertAdvScheme
254        INTEGER saltAdvScheme, saltVertAdvScheme        INTEGER saltAdvScheme, saltVertAdvScheme
255        INTEGER selectKEscheme        INTEGER selectKEscheme
256        INTEGER selectVortScheme        INTEGER selectVortScheme
257          INTEGER selectBotDragQuadr
258          INTEGER readBinaryPrec
259          INTEGER writeStatePrec
260          INTEGER writeBinaryPrec
261          INTEGER rwSuffixType
262        INTEGER monitorSelect        INTEGER monitorSelect
263        INTEGER debugLevel        INTEGER debugLevel
264          INTEGER plotLevel
265    
266  C--   COMMON /PARM_L/ Logical valued parameters used by the model.  C--   COMMON /PARM_L/ Logical valued parameters used by the model.
267  C- Coordinate + Grid params:  C- Coordinate + Grid params:
268  C     fluidIsAir       :: Set to indicate that the fluid major constituent  C     fluidIsAir       :: Set to indicate that the fluid major constituent
269  C                        is air  C                         is air
270  C     fluidIsWater     :: Set to indicate that the fluid major constituent  C     fluidIsWater     :: Set to indicate that the fluid major constituent
271  C                        is water  C                         is water
272  C     usingPCoords     :: Set to indicate that we are working in a pressure  C     usingPCoords     :: Set to indicate that we are working in a pressure
273  C                        type coordinate (p or p*).  C                         type coordinate (p or p*).
274  C     usingZCoords     :: Set to indicate that we are working in a height  C     usingZCoords     :: Set to indicate that we are working in a height
275  C                        type coordinate (z or z*)  C                         type coordinate (z or z*)
 C     useDynP_inEos_Zc :: use the dynamical pressure in EOS (with Z-coord.)  
 C                         this requires specific code for restart & exchange  
276  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian  C     usingCartesianGrid :: If TRUE grid generation will be in a cartesian
277  C                          coordinate frame.  C                           coordinate frame.
278  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a  C     usingSphericalPolarGrid :: If TRUE grid generation will be in a
279  C                               spherical polar frame.  C                                spherical polar frame.
280  C     rotateGrid      :: rotate grid coordinates to geographical coordinates  C     rotateGrid      :: rotate grid coordinates to geographical coordinates
281  C                        according to Euler angles phiEuler, thetaEuler, psiEuler  C                        according to Euler angles phiEuler, thetaEuler, psiEuler
 C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)  
282  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical  C     usingCylindricalGrid :: If TRUE grid generation will be Cylindrical
283    C     usingCurvilinearGrid :: If TRUE, use a curvilinear grid (to be provided)
284    C     hasWetCSCorners :: domain contains CS-type corners where dynamics is solved
285  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)  C     deepAtmosphere :: deep model (drop the shallow-atmosphere approximation)
286  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)  C     setInterFDr    :: set Interface depth (put cell-Center at the middle)
287  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)  C     setCenterDr    :: set cell-Center depth (put Interface at the middle)
288    C     useMin4hFacEdges :: set hFacW,hFacS as minimum of adjacent hFacC factor
289  C- Momentum params:  C- Momentum params:
290  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.  C     no_slip_sides  :: Impose "no-slip" at lateral boundaries.
291  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.  C     no_slip_bottom :: Impose "no-slip" at bottom boundary.
292    C     bottomVisc_pCell :: account for partial-cell in bottom visc. (no-slip BC)
293    C     useSmag3D      :: Use isotropic 3-D Smagorinsky
294  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable  C     useFullLeith   :: Set to true to use full Leith viscosity(may be unstable
295  C                       on irregular grids)  C                       on irregular grids)
296  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms  C     useStrainTensionVisc:: Set to true to use Strain-Tension viscous terms
# Line 280  C     useJamartMomAdv :: Use wet-point m Line 314  C     useJamartMomAdv :: Use wet-point m
314  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term  C     upwindVorticity :: bias interpolation of vorticity in the Coriolis term
315  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity (V.I., advection)  C     highOrderVorticity :: use 3rd/4th order interp. of vorticity (V.I., advection)
316  C     useAbsVorticity :: work with f+zeta in Coriolis terms  C     useAbsVorticity :: work with f+zeta in Coriolis terms
317  C     upwindShear        :: use 1rst order upwind interp. (V.I., vertical advection)  C     upwindShear     :: use 1rst order upwind interp. (V.I., vertical advection)
318  C     momStepping    :: Turns momentum equation time-stepping off  C     momStepping    :: Turns momentum equation time-stepping off
319  C     calc_wVelocity :: Turns of vertical velocity calculation off  C     calc_wVelocity :: Turns vertical velocity calculation off
320  C- Temp. & Salt params:  C- Temp. & Salt params:
321  C     tempStepping   :: Turns temperature equation time-stepping off  C     tempStepping   :: Turns temperature equation time-stepping on/off
322  C     saltStepping   :: Turns salinity equation time-stepping off  C     saltStepping   :: Turns salinity equation time-stepping on/off
323    C     addFrictionHeating :: account for frictional heating
324  C     tempAdvection  :: Flag which turns advection of temperature on and off.  C     tempAdvection  :: Flag which turns advection of temperature on and off.
325    C     tempVertDiff4  :: use vertical bi-harmonic diffusion for temperature
326  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer  C     tempIsActiveTr :: Pot.Temp. is a dynamically active tracer
327  C     tempForcing    :: Flag which turns external forcing of temperature on  C     tempForcing    :: Flag which turns external forcing of temperature on/off
 C                       and off.  
328  C     saltAdvection  :: Flag which turns advection of salinity on and off.  C     saltAdvection  :: Flag which turns advection of salinity on and off.
329    C     saltVertDiff4  :: use vertical bi-harmonic diffusion for salinity
330  C     saltIsActiveTr :: Salinity  is a dynamically active tracer  C     saltIsActiveTr :: Salinity  is a dynamically active tracer
331  C     saltForcing    :: Flag which turns external forcing of salinity on  C     saltForcing    :: Flag which turns external forcing of salinity on/off
 C                       and off.  
332  C     maskIniTemp    :: apply mask to initial Pot.Temp.  C     maskIniTemp    :: apply mask to initial Pot.Temp.
333  C     maskIniSalt    :: apply mask to initial salinity  C     maskIniSalt    :: apply mask to initial salinity
334  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.  C     checkIniTemp   :: check for points with identically zero initial Pot.Temp.
335  C     checkIniSalt   :: check for points with identically zero initial salinity  C     checkIniSalt   :: check for points with identically zero initial salinity
 C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux  
 C                         as a real Fresh Water (=> changes the Sea Level)  
 C                         if F, converts P+R-E to salt flux (no SL effect)  
336  C- Pressure solver related parameters (PARM02)  C- Pressure solver related parameters (PARM02)
337  C     useSRCGSolver  :: Set to true to use conjugate gradient  C     useSRCGSolver  :: Set to true to use conjugate gradient
338  C                       solver with single reduction (only one call of  C                       solver with single reduction (only one call of
339  C                       s/r mpi_allreduce), default is false  C                       s/r mpi_allreduce), default is false
340  C- Time-stepping params:  C- Time-stepping & free-surface params:
341  C     rigidLid            :: Set to true to use rigid lid  C     rigidLid            :: Set to true to use rigid lid
342  C     implicitFreeSurface :: Set to true to use implicit free surface  C     implicitFreeSurface :: Set to true to use implicit free surface
343    C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the
344    C                            linear relation Phi_surf = Bo_surf*eta
345    C     uniformFreeSurfLev  :: TRUE if free-surface level-index is uniform (=1)
346  C     exactConserv        :: Set to true to conserve exactly the total Volume  C     exactConserv        :: Set to true to conserve exactly the total Volume
347  C     linFSConserveTr     :: Set to true to correct source/sink of tracer  C     linFSConserveTr     :: Set to true to correct source/sink of tracer
348  C                            at the surface due to Linear Free Surface  C                            at the surface due to Linear Free Surface
349  C     uniformLin_PhiSurf  :: Set to true to use a uniform Bo_surf in the  C     useRealFreshWaterFlux :: if True (=Natural BCS), treats P+R-E flux
350  C                            linear relation Phi_surf = Bo_surf*eta  C                         as a real Fresh Water (=> changes the Sea Level)
351    C                         if F, converts P+R-E to salt flux (no SL effect)
352    C     storePhiHyd4Phys :: store hydrostatic potential for use in Physics/EOS
353    C                         this requires specific code for restart & exchange
354  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm  C     quasiHydrostatic :: Using non-hydrostatic terms in hydrostatic algorithm
355  C     nonHydrostatic   :: Using non-hydrostatic algorithm  C     nonHydrostatic   :: Using non-hydrostatic algorithm
356  C     use3Dsolver      :: set to true to use 3-D pressure solver  C     use3Dsolver      :: set to true to use 3-D pressure solver
357  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly  C     implicitIntGravWave :: treat Internal Gravity Wave implicitly
358  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S  C     staggerTimeStep   :: enable a Stagger time stepping U,V (& W) then T,S
359    C     applyExchUV_early :: Apply EXCH to U,V earlier, just before integr_continuity
360  C     doResetHFactors   :: Do reset thickness factors @ beginning of each time-step  C     doResetHFactors   :: Do reset thickness factors @ beginning of each time-step
361  C     implicitDiffusion :: Turns implicit vertical diffusion on  C     implicitDiffusion :: Turns implicit vertical diffusion on
362  C     implicitViscosity :: Turns implicit vertical viscosity on  C     implicitViscosity :: Turns implicit vertical viscosity on
363  C     tempImplVertAdv :: Turns on implicit vertical advection for Temperature  C     tempImplVertAdv   :: Turns on implicit vertical advection for Temperature
364  C     saltImplVertAdv :: Turns on implicit vertical advection for Salinity  C     saltImplVertAdv   :: Turns on implicit vertical advection for Salinity
365  C     momImplVertAdv  :: Turns on implicit vertical advection for Momentum  C     momImplVertAdv    :: Turns on implicit vertical advection for Momentum
366  C     multiDimAdvection :: Flag that enable multi-dimension advection  C     multiDimAdvection :: Flag that enable multi-dimension advection
367  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once  C     useMultiDimAdvec  :: True if multi-dim advection is used at least once
368  C     momDissip_In_AB   :: if False, put Dissipation tendency contribution  C     momDissip_In_AB   :: if False, put Dissipation tendency contribution
# Line 338  C     doThetaClimRelax :: Set true if re Line 377  C     doThetaClimRelax :: Set true if re
377  C                        climatology is required.  C                        climatology is required.
378  C     doSaltClimRelax  :: Set true if relaxation to salinity  C     doSaltClimRelax  :: Set true if relaxation to salinity
379  C                        climatology is required.  C                        climatology is required.
380    C     balanceThetaClimRelax :: substract global mean effect at every time step
381    C     balanceSaltClimRelax :: substract global mean effect at every time step
382  C     allowFreezing  :: Allows surface water to freeze and form ice  C     allowFreezing  :: Allows surface water to freeze and form ice
 C     allowInteriorFreezing :: Allow water at depth to freeze and rise to the surface  
 C     useOldFreezing :: use the old version (before checkpoint52a_pre, 2003-11-12)  
383  C     periodicExternalForcing :: Set true if forcing is time-dependant  C     periodicExternalForcing :: Set true if forcing is time-dependant
384  C- I/O parameters -  C- I/O parameters -
385  C     globalFiles    :: Selects between "global" and "tiled" files.  C     globalFiles    :: Selects between "global" and "tiled" files.
# Line 360  C     snapshot_mdsio     :: use mdsio fo Line 399  C     snapshot_mdsio     :: use mdsio fo
399  C     monitor_stdio      :: use stdio for monitor output  C     monitor_stdio      :: use stdio for monitor output
400  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)  C     dumpInitAndLast :: dumps model state to files at Initial (nIter0)
401  C                        & Last iteration, in addition multiple of dumpFreq iter.  C                        & Last iteration, in addition multiple of dumpFreq iter.
 C     printDomain     :: controls printing of domain fields (bathy, hFac ...).  
402    
403        COMMON /PARM_L/        COMMON /PARM_L/
404       & fluidIsAir, fluidIsWater,       & fluidIsAir, fluidIsWater,
405       & usingPCoords, usingZCoords, useDynP_inEos_Zc,       & usingPCoords, usingZCoords,
406       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,       & usingCartesianGrid, usingSphericalPolarGrid, rotateGrid,
407       & usingCurvilinearGrid, usingCylindricalGrid,       & usingCylindricalGrid, usingCurvilinearGrid, hasWetCSCorners,
408       & deepAtmosphere, setInterFDr, setCenterDr,       & deepAtmosphere, setInterFDr, setCenterDr, useMin4hFacEdges,
409       & no_slip_sides, no_slip_bottom,       & no_slip_sides, no_slip_bottom, bottomVisc_pCell, useSmag3D,
410       & useFullLeith, useStrainTensionVisc, useAreaViscLength,       & useFullLeith, useStrainTensionVisc, useAreaViscLength,
411       & momViscosity, momAdvection, momForcing,       & momViscosity, momAdvection, momForcing,
412       & momPressureForcing, metricTerms, useNHMTerms,       & momPressureForcing, metricTerms, useNHMTerms,
# Line 378  C     printDomain     :: controls printi Line 416  C     printDomain     :: controls printi
416       & upwindVorticity, highOrderVorticity,       & upwindVorticity, highOrderVorticity,
417       & useAbsVorticity, upwindShear,       & useAbsVorticity, upwindShear,
418       & momStepping, calc_wVelocity, tempStepping, saltStepping,       & momStepping, calc_wVelocity, tempStepping, saltStepping,
419       & tempAdvection, tempIsActiveTr, tempForcing,       & addFrictionHeating,
420       & saltAdvection, saltIsActiveTr, saltForcing,       & tempAdvection, tempVertDiff4, tempIsActiveTr, tempForcing,
421         & saltAdvection, saltVertDiff4, saltIsActiveTr, saltForcing,
422       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,       & maskIniTemp, maskIniSalt, checkIniTemp, checkIniSalt,
423       & useRealFreshWaterFlux, useSRCGSolver,       & useSRCGSolver,
424       & rigidLid, implicitFreeSurface, exactConserv, linFSConserveTr,       & rigidLid, implicitFreeSurface,
425       & uniformLin_PhiSurf,       & uniformLin_PhiSurf, uniformFreeSurfLev,
426       & quasiHydrostatic, nonHydrostatic, use3Dsolver,       & exactConserv, linFSConserveTr, useRealFreshWaterFlux,
427       & implicitIntGravWave, staggerTimeStep, doResetHFactors,       & storePhiHyd4Phys, quasiHydrostatic, nonHydrostatic,
428         & use3Dsolver, implicitIntGravWave, staggerTimeStep,
429         & applyExchUV_early, doResetHFactors,
430       & implicitDiffusion, implicitViscosity,       & implicitDiffusion, implicitViscosity,
431       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,       & tempImplVertAdv, saltImplVertAdv, momImplVertAdv,
432       & multiDimAdvection, useMultiDimAdvec,       & multiDimAdvection, useMultiDimAdvec,
433       & momDissip_In_AB, doAB_onGtGs,       & momDissip_In_AB, doAB_onGtGs,
434       & balanceEmPmR, balanceQnet, balancePrintMean,       & balanceEmPmR, balanceQnet, balancePrintMean,
435         & balanceThetaClimRelax, balanceSaltClimRelax,
436       & doThetaClimRelax, doSaltClimRelax,       & doThetaClimRelax, doSaltClimRelax,
437       & allowFreezing, allowInteriorFreezing, useOldFreezing,       & allowFreezing,
438       & periodicExternalForcing,       & periodicExternalForcing,
439       & globalFiles,       & globalFiles,
440       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,       & pickupStrictlyMatch, usePickupBeforeC54, startFromPickupAB2,
441       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,       & pickup_read_mdsio, pickup_write_mdsio, pickup_write_immed,
442       & writePickupAtEnd,       & writePickupAtEnd,
443       & timeave_mdsio, snapshot_mdsio, monitor_stdio,       & timeave_mdsio, snapshot_mdsio, monitor_stdio,
444       & outputTypesInclusive, dumpInitAndLast,       & outputTypesInclusive, dumpInitAndLast
      & printDomain,  
      & inAdMode, inAdTrue, inAdFalse, inAdExact  
445    
446        LOGICAL fluidIsAir        LOGICAL fluidIsAir
447        LOGICAL fluidIsWater        LOGICAL fluidIsWater
448        LOGICAL usingPCoords        LOGICAL usingPCoords
449        LOGICAL usingZCoords        LOGICAL usingZCoords
       LOGICAL useDynP_inEos_Zc  
450        LOGICAL usingCartesianGrid        LOGICAL usingCartesianGrid
451        LOGICAL usingSphericalPolarGrid, rotateGrid        LOGICAL usingSphericalPolarGrid, rotateGrid
452        LOGICAL usingCylindricalGrid        LOGICAL usingCylindricalGrid
453        LOGICAL usingCurvilinearGrid        LOGICAL usingCurvilinearGrid, hasWetCSCorners
454        LOGICAL deepAtmosphere        LOGICAL deepAtmosphere
455        LOGICAL setInterFDr        LOGICAL setInterFDr
456        LOGICAL setCenterDr        LOGICAL setCenterDr
457        LOGICAL useNHMTerms        LOGICAL useMin4hFacEdges
458    
459        LOGICAL no_slip_sides        LOGICAL no_slip_sides
460        LOGICAL no_slip_bottom        LOGICAL no_slip_bottom
461          LOGICAL bottomVisc_pCell
462          LOGICAL useSmag3D
463        LOGICAL useFullLeith        LOGICAL useFullLeith
464        LOGICAL useStrainTensionVisc        LOGICAL useStrainTensionVisc
465        LOGICAL useAreaViscLength        LOGICAL useAreaViscLength
# Line 425  C     printDomain     :: controls printi Line 467  C     printDomain     :: controls printi
467        LOGICAL momAdvection        LOGICAL momAdvection
468        LOGICAL momForcing        LOGICAL momForcing
469        LOGICAL momPressureForcing        LOGICAL momPressureForcing
470          LOGICAL metricTerms
471          LOGICAL useNHMTerms
472    
473        LOGICAL useCoriolis        LOGICAL useCoriolis
474          LOGICAL use3dCoriolis
475          LOGICAL useCDscheme
476        LOGICAL vectorInvariantMomentum        LOGICAL vectorInvariantMomentum
477          LOGICAL useEnergyConservingCoriolis
478          LOGICAL useJamartWetPoints
479          LOGICAL useJamartMomAdv
480          LOGICAL upwindVorticity
481          LOGICAL highOrderVorticity
482          LOGICAL useAbsVorticity
483          LOGICAL upwindShear
484          LOGICAL momStepping
485          LOGICAL calc_wVelocity
486          LOGICAL tempStepping
487          LOGICAL saltStepping
488          LOGICAL addFrictionHeating
489        LOGICAL tempAdvection        LOGICAL tempAdvection
490          LOGICAL tempVertDiff4
491        LOGICAL tempIsActiveTr        LOGICAL tempIsActiveTr
492        LOGICAL tempForcing        LOGICAL tempForcing
493        LOGICAL saltAdvection        LOGICAL saltAdvection
494          LOGICAL saltVertDiff4
495        LOGICAL saltIsActiveTr        LOGICAL saltIsActiveTr
496        LOGICAL saltForcing        LOGICAL saltForcing
497        LOGICAL maskIniTemp        LOGICAL maskIniTemp
498        LOGICAL maskIniSalt        LOGICAL maskIniSalt
499        LOGICAL checkIniTemp        LOGICAL checkIniTemp
500        LOGICAL checkIniSalt        LOGICAL checkIniSalt
       LOGICAL useRealFreshWaterFlux  
501        LOGICAL useSRCGSolver        LOGICAL useSRCGSolver
502        LOGICAL rigidLid        LOGICAL rigidLid
503        LOGICAL implicitFreeSurface        LOGICAL implicitFreeSurface
504          LOGICAL uniformLin_PhiSurf
505          LOGICAL uniformFreeSurfLev
506        LOGICAL exactConserv        LOGICAL exactConserv
507        LOGICAL linFSConserveTr        LOGICAL linFSConserveTr
508        LOGICAL uniformLin_PhiSurf        LOGICAL useRealFreshWaterFlux
509          LOGICAL storePhiHyd4Phys
510        LOGICAL quasiHydrostatic        LOGICAL quasiHydrostatic
511        LOGICAL nonHydrostatic        LOGICAL nonHydrostatic
512        LOGICAL use3Dsolver        LOGICAL use3Dsolver
513        LOGICAL implicitIntGravWave        LOGICAL implicitIntGravWave
514        LOGICAL staggerTimeStep        LOGICAL staggerTimeStep
515          LOGICAL applyExchUV_early
516        LOGICAL doResetHFactors        LOGICAL doResetHFactors
       LOGICAL momStepping  
       LOGICAL calc_wVelocity  
       LOGICAL tempStepping  
       LOGICAL saltStepping  
       LOGICAL metricTerms  
       LOGICAL use3dCoriolis  
       LOGICAL useCDscheme  
       LOGICAL useEnergyConservingCoriolis  
       LOGICAL useJamartWetPoints  
       LOGICAL useJamartMomAdv  
       LOGICAL upwindVorticity  
       LOGICAL highOrderVorticity  
       LOGICAL useAbsVorticity  
       LOGICAL upwindShear  
517        LOGICAL implicitDiffusion        LOGICAL implicitDiffusion
518        LOGICAL implicitViscosity        LOGICAL implicitViscosity
519        LOGICAL tempImplVertAdv        LOGICAL tempImplVertAdv
# Line 478  C     printDomain     :: controls printi Line 528  C     printDomain     :: controls printi
528        LOGICAL balancePrintMean        LOGICAL balancePrintMean
529        LOGICAL doThetaClimRelax        LOGICAL doThetaClimRelax
530        LOGICAL doSaltClimRelax        LOGICAL doSaltClimRelax
531          LOGICAL balanceThetaClimRelax
532          LOGICAL balanceSaltClimRelax
533        LOGICAL allowFreezing        LOGICAL allowFreezing
       LOGICAL allowInteriorFreezing  
       LOGICAL useOldFreezing  
534        LOGICAL periodicExternalForcing        LOGICAL periodicExternalForcing
535        LOGICAL globalFiles        LOGICAL globalFiles
536        LOGICAL pickupStrictlyMatch        LOGICAL pickupStrictlyMatch
# Line 491  C     printDomain     :: controls printi Line 541  C     printDomain     :: controls printi
541        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio        LOGICAL timeave_mdsio, snapshot_mdsio, monitor_stdio
542        LOGICAL outputTypesInclusive        LOGICAL outputTypesInclusive
543        LOGICAL dumpInitAndLast        LOGICAL dumpInitAndLast
       LOGICAL printDomain  
       LOGICAL inAdMode, inAdTrue, inAdFalse, inAdExact  
544    
545  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.  C--   COMMON /PARM_R/ "Real" valued parameters used by the model.
546  C     cg2dTargetResidual  C     cg2dTargetResidual
# Line 524  C                :: most cell face (Lat- Line 572  C                :: most cell face (Lat-
572  C                :: parameter but it makes geographical references simple.)  C                :: parameter but it makes geographical references simple.)
573  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern  C     ygOrigin   :: Origin of the Y-axis (Cartesian Grid) / Latitude of Southern
574  C                :: most face (Lat-Lon grid).  C                :: most face (Lat-Lon grid).
575  C     gravity   :: Accel. due to gravity ( m/s^2 )  C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).
576  C     recip_gravity and its inverse  C     recip_rSphere :: Reciprocal radius of sphere ( m^-1 ).
577  C     gBaro     :: Accel. due to gravity used in barotropic equation ( m/s^2 )  C     radius_fromHorizGrid :: sphere Radius of input horiz. grid (Curvilinear Grid)
578  C     rhoNil    :: Reference density for the linear equation of state  C     seaLev_Z   :: the reference height of sea-level (usually zero)
579  C     rhoConst  :: Vertically constant reference density  C     top_Pres   :: pressure (P-Coords) or reference pressure (Z-Coords) at the top
580  C     rhoFacC   :: normalized (by rhoConst) reference density at cell-Center  C     rSigmaBnd  :: vertical position (in r-unit) of r/sigma transition (Hybrid-Sigma)
581  C     rhoFacF   :: normalized (by rhoConst) reference density at cell-interFace  C     gravity    :: Acceleration due to constant gravity ( m/s^2 )
582    C     recip_gravity :: Reciprocal gravity acceleration ( s^2/m )
583    C     gBaro      :: Accel. due to gravity used in barotropic equation ( m/s^2 )
584    C     gravFacC   :: gravity factor (vs surf. gravity) vert. profile at cell-Center
585    C     gravFacF   :: gravity factor (vs surf. gravity) vert. profile at cell-interF
586    C     rhoNil     :: Reference density for the linear equation of state
587    C     rhoConst   :: Vertically constant reference density (Boussinesq)
588    C     rho1Ref    :: reference vertical profile for density (anelastic)
589    C     rhoFacC    :: normalized (by rhoConst) reference density at cell-Center
590    C     rhoFacF    :: normalized (by rhoConst) reference density at cell-interFace
591  C     rhoConstFresh :: Constant reference density for fresh water (rain)  C     rhoConstFresh :: Constant reference density for fresh water (rain)
592  C     rho1Ref   :: reference vertical profile for density  C     thetaConst :: Constant reference for potential temperature
593  C     tRef      :: reference vertical profile for potential temperature  C     tRef       :: reference vertical profile for potential temperature
594  C     sRef      :: reference vertical profile for salinity/specific humidity  C     sRef       :: reference vertical profile for salinity/specific humidity
595  C     phiRef    :: reference potential (pressure/rho, geopotential) profile  C     pRef4EOS   :: reference pressure used in EOS (case selectP_inEOS_Zc=1)
596  C     dBdrRef   :: vertical gradient of reference buoyancy  [(m/s/r)^2]:  C     phiRef     :: reference potential (press/rho, geopot) profile (m^2/s^2)
597  C               :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]  C     dBdrRef    :: vertical gradient of reference buoyancy  [(m/s/r)^2]:
598  C               :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]  C                :: z-coord: = N^2_ref = Brunt-Vaissala frequency [s^-2]
599    C                :: p-coord: = -(d.alpha/dp)_ref          [(m^2.s/kg)^2]
600  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),  C     rVel2wUnit :: units conversion factor (Non-Hydrostatic code),
601  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].  C                :: from r-coordinate vertical velocity to vertical velocity [m/s].
602  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit  C                :: z-coord: = 1 ; p-coord: wSpeed [m/s] = rVel [Pa/s] * rVel2wUnit
# Line 553  C     rUnit2mass :: units conversion fac Line 611  C     rUnit2mass :: units conversion fac
611  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].  C                :: from vertical r-coordinate unit to mass per unit area [kg/m2].
612  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;  C                :: z-coord: = rhoConst  ( [m] * rho = [kg/m2] ) ;
613  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;  C                :: p-coord: = 1/gravity ( [Pa] /  g = [kg/m2] ) ;
 C     rSphere    :: Radius of sphere for a spherical polar grid ( m ).  
 C     recip_rSphere  :: Reciprocal radius of sphere ( m ).  
 C     radius_fromHorizGrid :: sphere Radius of input horiz. grid (Curvilinear Grid)  
614  C     f0         :: Reference coriolis parameter ( 1/s )  C     f0         :: Reference coriolis parameter ( 1/s )
615  C                   ( Southern edge f for beta plane )  C                   ( Southern edge f for beta plane )
616  C     beta       :: df/dy ( s^-1.m^-1 )  C     beta       :: df/dy ( s^-1.m^-1 )
# Line 569  C     viscAh     :: Eddy viscosity coeff Line 624  C     viscAh     :: Eddy viscosity coeff
624  C                   momentum laterally ( m^2/s )  C                   momentum laterally ( m^2/s )
625  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical  C     viscAhW    :: Eddy viscosity coeff. for mixing of vertical
626  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
627  C                   model, defaults to viscAh if unset ( m^2/s )  C                   model, defaults to viscAhD if unset ( m^2/s )
628  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
629  C     viscA4     :: Biharmonic viscosity coeff. for mixing of  C     viscA4     :: Biharmonic viscosity coeff. for mixing of
630  C                   momentum laterally ( m^4/s )  C                   momentum laterally ( m^4/s )
631  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical  C     viscA4W    :: Biharmonic viscosity coeff. for mixing of vertical
632  C                   momentum laterally, no effect for hydrostatic  C                   momentum laterally, no effect for hydrostatic
633  C                   model, defaults to viscA4 if unset ( m^2/s )  C                   model, defaults to viscA4D if unset ( m^2/s )
634  C                   Not used if variable horiz. viscosity is used.  C                   Not used if variable horiz. viscosity is used.
635  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally  C     viscAhD    :: Eddy viscosity coeff. for mixing of momentum laterally
636  C                   (act on Divergence part) ( m^2/s )  C                   (act on Divergence part) ( m^2/s )
# Line 585  C     viscA4D    :: Biharmonic viscosity Line 640  C     viscA4D    :: Biharmonic viscosity
640  C                   (act on Divergence part) ( m^4/s )  C                   (act on Divergence part) ( m^4/s )
641  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally  C     viscA4Z    :: Biharmonic viscosity coeff. for mixing of momentum laterally
642  C                   (act on Vorticity  part) ( m^4/s )  C                   (act on Vorticity  part) ( m^4/s )
643    C     smag3D_coeff :: Isotropic 3-D Smagorinsky coefficient (-)
644  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC2leith  :: Leith non-dimensional viscosity factor (grad(vort))
645  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))  C     viscC2leithD :: Modified Leith non-dimensional visc. factor (grad(div))
646  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))  C     viscC4leith  :: Leith non-dimensional viscosity factor (grad(vort))
# Line 607  C     viscA4GridMax:: maximum and minimu Line 663  C     viscA4GridMax:: maximum and minimu
663  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity  C     viscA4GridMin::  in terms of non-dimensional grid-size dependent viscosity
664  C     diffKhT   :: Laplacian diffusion coeff. for mixing of  C     diffKhT   :: Laplacian diffusion coeff. for mixing of
665  C                 heat laterally ( m^2/s )  C                 heat laterally ( m^2/s )
 C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of heat vertically ( units of r^2/s )  
666  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of  C     diffK4T   :: Biharmonic diffusion coeff. for mixing of
667  C                 heat laterally ( m^4/s )  C                 heat laterally ( m^4/s )
668    C     diffKrNrT :: vertical profile of Laplacian diffusion coeff.
669    C                 for mixing of heat vertically ( units of r^2/s )
670    C     diffKr4T  :: vertical profile of Biharmonic diffusion coeff.
671    C                 for mixing of heat vertically ( units of r^4/s )
672  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of  C     diffKhS  ::  Laplacian diffusion coeff. for mixing of
673  C                 salt laterally ( m^2/s )  C                 salt laterally ( m^2/s )
 C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.  
 C                 for mixing of salt vertically ( units of r^2/s ),  
674  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of  C     diffK4S   :: Biharmonic diffusion coeff. for mixing of
675  C                 salt laterally ( m^4/s )  C                 salt laterally ( m^4/s )
676    C     diffKrNrS :: vertical profile of Laplacian diffusion coeff.
677    C                 for mixing of salt vertically ( units of r^2/s ),
678    C     diffKr4S  :: vertical profile of Biharmonic diffusion coeff.
679    C                 for mixing of salt vertically ( units of r^4/s )
680  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79surf :: T/S surface diffusivity (m^2/s) Bryan and Lewis, 1979
681  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979  C     diffKrBL79deep :: T/S deep diffusivity (m^2/s) Bryan and Lewis, 1979
682  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979  C     diffKrBL79scl  :: depth scale for arctan fn (m) Bryan and Lewis, 1979
# Line 636  C                    Frequency of checkp Line 696  C                    Frequency of checkp
696  C                    are referenced to this clock. ( s )  C                    are referenced to this clock. ( s )
697  C     deltaTMom    :: Timestep for momemtum equations ( s )  C     deltaTMom    :: Timestep for momemtum equations ( s )
698  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k  C     dTtracerLev  :: Timestep for tracer equations ( s ), function of level k
699  C     deltaTfreesurf :: Timestep for free-surface equation ( s )  C     deltaTFreeSurf :: Timestep for free-surface equation ( s )
700  C     freesurfFac  :: Parameter to turn implicit free surface term on or off  C     freeSurfFac  :: Parameter to turn implicit free surface term on or off
701  C                    freesurfac = 1. uses implicit free surface  C                     freeSurFac = 1. uses implicit free surface
702  C                    freesurfac = 0. uses rigid lid  C                     freeSurFac = 0. uses rigid lid
703  C     abEps        :: Adams-Bashforth-2 stabilizing weight  C     abEps        :: Adams-Bashforth-2 stabilizing weight
704  C     alph_AB      :: Adams-Bashforth-3 primary factor  C     alph_AB      :: Adams-Bashforth-3 primary factor
705  C     beta_AB      :: Adams-Bashforth-3 secondary factor  C     beta_AB      :: Adams-Bashforth-3 secondary factor
706  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :  C     implicSurfPress :: parameter of the Crank-Nickelson time stepping :
707  C                     Implicit part of Surface Pressure Gradient ( 0-1 )  C                     Implicit part of Surface Pressure Gradient ( 0-1 )
708  C     implicDiv2Dflow :: parameter of the Crank-Nickelson time stepping :  C     implicDiv2DFlow :: parameter of the Crank-Nickelson time stepping :
709  C                     Implicit part of barotropic flow Divergence ( 0-1 )  C                     Implicit part of barotropic flow Divergence ( 0-1 )
710  C     implicitNHPress :: parameter of the Crank-Nickelson time stepping :  C     implicitNHPress :: parameter of the Crank-Nickelson time stepping :
711  C                     Implicit part of Non-Hydrostatic Pressure Gradient ( 0-1 )  C                     Implicit part of Non-Hydrostatic Pressure Gradient ( 0-1 )
# Line 664  C     endTime       :: Ending time for t Line 724  C     endTime       :: Ending time for t
724  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).  C     chkPtFreq     :: Frequency of rolling check pointing ( s ).
725  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).  C     pChkPtFreq    :: Frequency of permanent check pointing ( s ).
726  C     dumpFreq      :: Frequency with which model state is written to  C     dumpFreq      :: Frequency with which model state is written to
727  C                     post-processing files ( s ).  C                      post-processing files ( s ).
728  C     diagFreq      :: Frequency with which model writes diagnostic output  C     diagFreq      :: Frequency with which model writes diagnostic output
729  C                     of intermediate quantities.  C                      of intermediate quantities.
730  C     afFacMom      :: Advection of momentum term tracer parameter  C     afFacMom      :: Advection of momentum term tracer parameter
731  C     vfFacMom      :: Momentum viscosity tracer parameter  C     vfFacMom      :: Momentum viscosity tracer parameter
732  C     pfFacMom      :: Momentum pressure forcing tracer parameter  C     pfFacMom      :: Momentum pressure forcing tracer parameter
# Line 702  C     hMixCriteria:: criteria for mixed- Line 762  C     hMixCriteria:: criteria for mixed-
762  C     dRhoSmall   :: parameter for mixed-layer diagnostic  C     dRhoSmall   :: parameter for mixed-layer diagnostic
763  C     hMixSmooth  :: Smoothing parameter for mixed-layer diag (default=0=no smoothing)  C     hMixSmooth  :: Smoothing parameter for mixed-layer diag (default=0=no smoothing)
764  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]  C     ivdc_kappa  :: implicit vertical diffusivity for convection [m^2/s]
 C     Ro_SeaLevel :: standard position of Sea-Level in "R" coordinate, used as  
 C                    starting value (k=1) for vertical coordinate (rf(1)=Ro_SeaLevel)  
 C     rSigmaBnd   :: vertical position (in r-unit) of r/sigma transition (Hybrid-Sigma)  
765  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)  C     sideDragFactor     :: side-drag scaling factor (used only if no_slip_sides)
766  C                           (default=2: full drag ; =1: gives half-slip BC)  C                           (default=2: full drag ; =1: gives half-slip BC)
767  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)  C     bottomDragLinear    :: Linear    bottom-drag coefficient (units of [r]/s)
# Line 715  C                           is to be rep Line 772  C                           is to be rep
772  C                           (affects myabs, mymin, mymax)  C                           (affects myabs, mymin, mymax)
773  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales  C     nh_Am2        :: scales the non-hydrostatic terms and changes internal scales
774  C                      (i.e. allows convection at different Rayleigh numbers)  C                      (i.e. allows convection at different Rayleigh numbers)
775    C     tCylIn        :: Temperature of the cylinder inner boundary
776    C     tCylOut       :: Temperature of the cylinder outer boundary
777  C     phiEuler      :: Euler angle, rotation about original z-axis  C     phiEuler      :: Euler angle, rotation about original z-axis
778  C     thetaEuler    :: Euler angle, rotation about new x-axis  C     thetaEuler    :: Euler angle, rotation about new x-axis
779  C     psiEuler      :: Euler angle, rotation about new z-axis  C     psiEuler      :: Euler angle, rotation about new z-axis
780        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,        COMMON /PARM_R/ cg2dTargetResidual, cg2dTargetResWunit,
781       & cg2dpcOffDFac, cg3dTargetResidual,       & cg2dpcOffDFac, cg3dTargetResidual,
782       & delR, delRc, xgOrigin, ygOrigin,       & delR, delRc, xgOrigin, ygOrigin, rSphere, recip_rSphere,
783       & deltaT, deltaTmom, dTtracerLev, deltaTfreesurf, deltaTClock,       & radius_fromHorizGrid, seaLev_Z, top_Pres, rSigmaBnd,
784         & deltaT, deltaTMom, dTtracerLev, deltaTFreeSurf, deltaTClock,
785       & abEps, alph_AB, beta_AB,       & abEps, alph_AB, beta_AB,
      & rSphere, recip_rSphere, radius_fromHorizGrid,  
786       & f0, beta, fPrime, omega, rotationPeriod,       & f0, beta, fPrime, omega, rotationPeriod,
787       & viscFacAdj, viscAh, viscAhW, viscAhMax,       & viscFacAdj, viscAh, viscAhW, smag3D_coeff,
788       & viscAhGrid, viscAhGridMax, viscAhGridMin,       & viscAhMax, viscAhGrid, viscAhGridMax, viscAhGridMin,
789       & viscC2leith, viscC2leithD,       & viscC2leith, viscC2leithD,
790       & viscC2smag, viscC4smag,       & viscC2smag, viscC4smag,
791       & viscAhD, viscAhZ, viscA4D, viscA4Z,       & viscAhD, viscAhZ, viscA4D, viscA4Z,
# Line 734  C     psiEuler      :: Euler angle, rota Line 793  C     psiEuler      :: Euler angle, rota
793       & viscA4Grid, viscA4GridMax, viscA4GridMin,       & viscA4Grid, viscA4GridMax, viscA4GridMin,
794       & viscAhReMax, viscA4ReMax,       & viscAhReMax, viscA4ReMax,
795       & viscC4leith, viscC4leithD, viscArNr,       & viscC4leith, viscC4leithD, viscArNr,
796       & diffKhT, diffK4T, diffKrNrT,       & diffKhT, diffK4T, diffKrNrT, diffKr4T,
797       & diffKhS, diffK4S, diffKrNrS,       & diffKhS, diffK4S, diffKrNrS, diffKr4S,
798       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,       & diffKrBL79surf, diffKrBL79deep, diffKrBL79scl, diffKrBL79Ho,
799       & BL79LatVary,       & BL79LatVary,
800       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,       & diffKrBLEQsurf, diffKrBLEQdeep, diffKrBLEQscl, diffKrBLEQHo,
801       & tauCD, rCD, epsAB_CD,       & tauCD, rCD, epsAB_CD,
802       & freeSurfFac, implicSurfPress, implicDiv2Dflow, implicitNHPress,       & freeSurfFac, implicSurfPress, implicDiv2DFlow, implicitNHPress,
803       & hFacMin, hFacMinDz, hFacInf, hFacSup,       & hFacMin, hFacMinDz, hFacInf, hFacSup,
804       & gravity, recip_gravity, gBaro,       & gravity, recip_gravity, gBaro,
805       & rhonil, recip_rhonil, rhoConst, recip_rhoConst,       & gravFacC, recip_gravFacC, gravFacF, recip_gravFacF,
806       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF,       & rhoNil, rhoConst, recip_rhoConst, rho1Ref,
807       & rhoConstFresh, rho1Ref, tRef, sRef, phiRef, dBdrRef,       & rhoFacC, recip_rhoFacC, rhoFacF, recip_rhoFacF, rhoConstFresh,
808         & thetaConst, tRef, sRef, pRef4EOS, phiRef, dBdrRef,
809       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,       & rVel2wUnit, wUnit2rVel, mass2rUnit, rUnit2mass,
810       & baseTime, startTime, endTime,       & baseTime, startTime, endTime,
811       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,       & chkPtFreq, pChkPtFreq, dumpFreq, adjDumpFreq,
# Line 757  C     psiEuler      :: Euler angle, rota Line 817  C     psiEuler      :: Euler angle, rota
817       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,       & convertFW2Salt, temp_EvPrRn, salt_EvPrRn,
818       & temp_addMass, salt_addMass, hFacMinDr, hFacMinDp,       & temp_addMass, salt_addMass, hFacMinDr, hFacMinDp,
819       & ivdc_kappa, hMixCriteria, dRhoSmall, hMixSmooth,       & ivdc_kappa, hMixCriteria, dRhoSmall, hMixSmooth,
      & Ro_SeaLevel, rSigmaBnd,  
820       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,       & sideDragFactor, bottomDragLinear, bottomDragQuadratic, nh_Am2,
821       & smoothAbsFuncRange,       & smoothAbsFuncRange,
822       & tCylIn, tCylOut,       & tCylIn, tCylOut,
# Line 771  C     psiEuler      :: Euler angle, rota Line 830  C     psiEuler      :: Euler angle, rota
830        _RL delRc(Nr+1)        _RL delRc(Nr+1)
831        _RL xgOrigin        _RL xgOrigin
832        _RL ygOrigin        _RL ygOrigin
833          _RL rSphere
834          _RL recip_rSphere
835          _RL radius_fromHorizGrid
836          _RL seaLev_Z
837          _RL top_Pres
838          _RL rSigmaBnd
839        _RL deltaT        _RL deltaT
840        _RL deltaTClock        _RL deltaTClock
841        _RL deltaTmom        _RL deltaTMom
842        _RL dTtracerLev(Nr)        _RL dTtracerLev(Nr)
843        _RL deltaTfreesurf        _RL deltaTFreeSurf
844        _RL abEps, alph_AB, beta_AB        _RL abEps, alph_AB, beta_AB
       _RL rSphere  
       _RL recip_rSphere  
       _RL radius_fromHorizGrid  
845        _RL f0        _RL f0
846        _RL beta        _RL beta
847        _RL fPrime        _RL fPrime
# Line 787  C     psiEuler      :: Euler angle, rota Line 849  C     psiEuler      :: Euler angle, rota
849        _RL rotationPeriod        _RL rotationPeriod
850        _RL freeSurfFac        _RL freeSurfFac
851        _RL implicSurfPress        _RL implicSurfPress
852        _RL implicDiv2Dflow        _RL implicDiv2DFlow
853        _RL implicitNHPress        _RL implicitNHPress
854        _RL hFacMin        _RL hFacMin
855        _RL hFacMinDz        _RL hFacMinDz
# Line 801  C     psiEuler      :: Euler angle, rota Line 863  C     psiEuler      :: Euler angle, rota
863        _RL viscAhW        _RL viscAhW
864        _RL viscAhD        _RL viscAhD
865        _RL viscAhZ        _RL viscAhZ
866          _RL smag3D_coeff
867        _RL viscAhMax        _RL viscAhMax
868        _RL viscAhReMax        _RL viscAhReMax
869        _RL viscAhGrid, viscAhGridMax, viscAhGridMin        _RL viscAhGrid, viscAhGridMax, viscAhGridMin
# Line 818  C     psiEuler      :: Euler angle, rota Line 881  C     psiEuler      :: Euler angle, rota
881        _RL viscC4leithD        _RL viscC4leithD
882        _RL viscC4smag        _RL viscC4smag
883        _RL diffKhT        _RL diffKhT
       _RL diffKrNrT(Nr)  
884        _RL diffK4T        _RL diffK4T
885          _RL diffKrNrT(Nr)
886          _RL diffKr4T(Nr)
887        _RL diffKhS        _RL diffKhS
       _RL diffKrNrS(Nr)  
888        _RL diffK4S        _RL diffK4S
889          _RL diffKrNrS(Nr)
890          _RL diffKr4S(Nr)
891        _RL diffKrBL79surf        _RL diffKrBL79surf
892        _RL diffKrBL79deep        _RL diffKrBL79deep
893        _RL diffKrBL79scl        _RL diffKrBL79scl
# Line 833  C     psiEuler      :: Euler angle, rota Line 898  C     psiEuler      :: Euler angle, rota
898        _RL diffKrBLEQscl        _RL diffKrBLEQscl
899        _RL diffKrBLEQHo        _RL diffKrBLEQHo
900        _RL tauCD, rCD, epsAB_CD        _RL tauCD, rCD, epsAB_CD
901        _RL gravity        _RL gravity,       recip_gravity
       _RL recip_gravity  
902        _RL gBaro        _RL gBaro
903        _RL rhonil,        recip_rhonil        _RL gravFacC(Nr),   recip_gravFacC(Nr)
904          _RL gravFacF(Nr+1), recip_gravFacF(Nr+1)
905          _RL rhoNil
906        _RL rhoConst,      recip_rhoConst        _RL rhoConst,      recip_rhoConst
907          _RL rho1Ref(Nr)
908        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)        _RL rhoFacC(Nr),   recip_rhoFacC(Nr)
909        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)        _RL rhoFacF(Nr+1), recip_rhoFacF(Nr+1)
910        _RL rhoConstFresh        _RL rhoConstFresh
911        _RL rho1Ref(Nr)        _RL thetaConst
912        _RL tRef(Nr)        _RL tRef(Nr)
913        _RL sRef(Nr)        _RL sRef(Nr)
914          _RL pRef4EOS(Nr)
915        _RL phiRef(2*Nr+1)        _RL phiRef(2*Nr+1)
916        _RL dBdrRef(Nr)        _RL dBdrRef(Nr)
917        _RL rVel2wUnit(Nr+1), wUnit2rVel(Nr+1)        _RL rVel2wUnit(Nr+1), wUnit2rVel(Nr+1)
# Line 882  C     psiEuler      :: Euler angle, rota Line 950  C     psiEuler      :: Euler angle, rota
950        _RL hMixCriteria        _RL hMixCriteria
951        _RL dRhoSmall        _RL dRhoSmall
952        _RL hMixSmooth        _RL hMixSmooth
       _RL Ro_SeaLevel  
       _RL rSigmaBnd  
953        _RL sideDragFactor        _RL sideDragFactor
954        _RL bottomDragLinear        _RL bottomDragLinear
955        _RL bottomDragQuadratic        _RL bottomDragQuadratic
956        _RL smoothAbsFuncRange        _RL smoothAbsFuncRange
957        _RL nh_Am2        _RL nh_Am2
958        _RL tCylIn        _RL tCylIn, tCylOut
       _RL tCylOut  
959        _RL phiEuler, thetaEuler, psiEuler        _RL phiEuler, thetaEuler, psiEuler
960    
961  C--   COMMON /PARM_A/ Thermodynamics constants ?  C--   COMMON /PARM_A/ Thermodynamics constants ?
962        COMMON /PARM_A/ HeatCapacity_Cp,recip_Cp        COMMON /PARM_A/ HeatCapacity_Cp
963        _RL HeatCapacity_Cp        _RL HeatCapacity_Cp
       _RL recip_Cp  
964    
965  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)  C--   COMMON /PARM_ATM/ Atmospheric physical parameters (Ideal Gas EOS, ...)
966  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin  C     celsius2K :: convert centigrade (Celsius) degree to Kelvin
# Line 925  C Logical flags for selecting packages Line 989  C Logical flags for selecting packages
989        LOGICAL useZONAL_FILT        LOGICAL useZONAL_FILT
990        LOGICAL useOPPS        LOGICAL useOPPS
991        LOGICAL usePP81        LOGICAL usePP81
992          LOGICAL useKL10
993        LOGICAL useMY82        LOGICAL useMY82
994        LOGICAL useGGL90        LOGICAL useGGL90
995        LOGICAL useKPP        LOGICAL useKPP
# Line 936  C Logical flags for selecting packages Line 1001  C Logical flags for selecting packages
1001        LOGICAL useBulkForce        LOGICAL useBulkForce
1002        LOGICAL useEBM        LOGICAL useEBM
1003        LOGICAL useCheapAML        LOGICAL useCheapAML
1004          LOGICAL useAUTODIFF
1005        LOGICAL useGrdchk        LOGICAL useGrdchk
1006        LOGICAL useSMOOTH        LOGICAL useSMOOTH
1007          LOGICAL usePROFILES
1008        LOGICAL useECCO        LOGICAL useECCO
1009          LOGICAL useCTRL
1010        LOGICAL useSBO        LOGICAL useSBO
1011        LOGICAL useFLT        LOGICAL useFLT
1012        LOGICAL usePTRACERS        LOGICAL usePTRACERS
# Line 946  C Logical flags for selecting packages Line 1014  C Logical flags for selecting packages
1014        LOGICAL useRBCS        LOGICAL useRBCS
1015        LOGICAL useOffLine        LOGICAL useOffLine
1016        LOGICAL useMATRIX        LOGICAL useMATRIX
1017          LOGICAL useFRAZIL
1018        LOGICAL useSEAICE        LOGICAL useSEAICE
1019        LOGICAL useSALT_PLUME        LOGICAL useSALT_PLUME
1020        LOGICAL useShelfIce        LOGICAL useShelfIce
1021          LOGICAL useStreamIce
1022        LOGICAL useICEFRONT        LOGICAL useICEFRONT
1023        LOGICAL useThSIce        LOGICAL useThSIce
1024          LOGICAL useLand
1025        LOGICAL useATM2d        LOGICAL useATM2d
1026        LOGICAL useAIM        LOGICAL useAIM
1027        LOGICAL useLand        LOGICAL useAtm_Phys
1028        LOGICAL useFizhi        LOGICAL useFizhi
1029        LOGICAL useGridAlt        LOGICAL useGridAlt
1030        LOGICAL useDiagnostics        LOGICAL useDiagnostics
# Line 965  C Logical flags for selecting packages Line 1036  C Logical flags for selecting packages
1036        LOGICAL useMYPACKAGE        LOGICAL useMYPACKAGE
1037        COMMON /PARM_PACKAGES/        COMMON /PARM_PACKAGES/
1038       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,       &        useGAD, useOBCS, useSHAP_FILT, useZONAL_FILT,
1039       &        useOPPS, usePP81, useMY82, useGGL90, useKPP,       &        useOPPS, usePP81, useKL10, useMY82, useGGL90, useKPP,
1040       &        useGMRedi, useBBL, useDOWN_SLOPE,       &        useGMRedi, useBBL, useDOWN_SLOPE,
1041       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,       &        useCAL, useEXF, useBulkForce, useEBM, useCheapAML,
1042       &        useGrdchk, useSMOOTH, useECCO, useSBO, useFLT,       &        useGrdchk, useSMOOTH, usePROFILES, useECCO, useCTRL,
1043         &        useSBO, useFLT, useAUTODIFF,
1044       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,       &        usePTRACERS, useGCHEM, useRBCS, useOffLine, useMATRIX,
1045       &        useSEAICE, useSALT_PLUME, useShelfIce,       &        useFRAZIL, useSEAICE, useSALT_PLUME, useShelfIce,
1046       &        useICEFRONT, useThSIce,       &        useStreamIce, useICEFRONT, useThSIce, useLand,
1047       &        useATM2D, useAIM, useLand, useFizhi, useGridAlt,       &        useATM2D, useAIM, useAtm_Phys, useFizhi, useGridAlt,
1048       &        useDiagnostics, useREGRID, useLayers, useMNC,       &        useDiagnostics, useREGRID, useLayers, useMNC,
1049       &        useRunClock, useEMBED_FILES,       &        useRunClock, useEMBED_FILES,
1050       &        useMYPACKAGE       &        useMYPACKAGE
1051    
 C     Logical flags for turning off parts of the code in adjoint mode  
       LOGICAL useKPPinAdMode, useKPPinFwdMode  
       LOGICAL useGMrediInAdMode, useGMrediInFwdMode  
       LOGICAL useSEAICEinAdMode, useSEAICEinFwdMode  
       COMMON /PARM_PACKAGES_ADJ/  
      &       useKPPinAdMode, useKPPinFwdMode,  
      &       useGMrediInAdMode, useGMrediInFwdMode,  
      &       useSEAICEinAdMode, useSEAICEinFwdMode  
   
1052  CEH3 ;;; Local Variables: ***  CEH3 ;;; Local Variables: ***
1053  CEH3 ;;; mode:fortran ***  CEH3 ;;; mode:fortran ***
1054  CEH3 ;;; End: ***  CEH3 ;;; End: ***
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