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Modifications for non-hydrostatic ability + updates for open-boundaries.
These are changes concerning geometry on a sphere and BCs: o The calculation of RA used to be wrong if delX != delY. o The details of the cell geometry is now consistent with the "classic" CM-5 code. o Advection near boundaries is now correct. o Lateral no-slip/free-slip now works. o Vertical no-slip/free-slip now works properly. o del^4 viscosity (with no-slip/free-slip) now works properly.
Changes for new exchange routines which do general tile <-> tile connectivity, variable width overlap regions and provide hooks for shared memory and DMA protocols like Arctic, Memory Channel etc..
Consistent isomorphism changes
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Consistent isomorphism changes
Isomorphism consistency changes
Changes for moving from z -> r as a vertical coordinate Required changing r -> recip for reciprocal variable notation.
Merge of GM Redi and spherical polar and inplicit diffusion and CD. Everything for a global run is now included, however, still some discrepancies with GM Redi.
Changes to support "low" memory mode of operation - Small change to allow _RS -> REAL*4 to work - Added some macros for case where grid variations are a a subset of the general case. e.g. dx constnat or flat bottom
$Id to $Header changes
Initial revision
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