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revision 1.83 by mlosch, Thu Sep 5 20:49:32 2002 UTC revision 1.98 by adcroft, Tue Nov 5 19:20:40 2002 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6  checkpoint47d_post  o fixed sign of non-hydrostatic metric terms in u and v equations.
7      Depend on correct sign of gravitySign.
8    o added work.pc* to .cvsignore in aim directories using ifc
9    o introduced flag for controllin non-hydrostatic metric terms
10    o removed gravitySign from PARM04
11    o switched to g77/ifc from pgf77 in aim experiments
12    
13    checkpoint46l_post
14    o made convective adjustment work with pressure coordinates:
15     - changed the direction of k-loop in convective_adjustment.F for the
16       case of pressure coordinates (OCEANICP,ATMOSPHERIC buoyancyRelation)
17     - adjusted the reference pressure k-index in convective_adjustment.F
18     - adjusted the convection condition in convect.F (in analogy to
19       calc_ivdc.F)
20     - convective_adjustment no longer computes anything on the halos
21     - removed the warnings about negative salinity from find_rho.F and
22       find_alpha.F; instead the new routine look_for_neg_salinity, called
23       at the beginning of find_rho, find_alpha, and find_beta, does a
24       check of the entire slice, if CPP-option
25       CHECK_SALINITY_FOR_NEGATIVE_VALUES is defined
26    checkpoint46l_pre
27    
28    checkpoint46k_post
29    o fixed the verification/global_ocean.90x40x15 experiment:
30     - new bathymetry (the world according to A., JMC, and M.)
31     - new initial fields and forcing fields (*.bin files)
32     - new POLY3.COEFFS (for the next release one should switch to a full
33       equation of state: JMD95P or MDJWF)
34     - fixed several errors and redundancies in the data file
35     - experiment uses looped cells
36     - added matlab directory with diagnostic scripts for plotting of output
37    
38    o S/R aim_initialise.F replace S/R aim_init from file aim_do_inphys.F:
39     - read AIM physics parameters from a file (data.aimphys)
40     - set defaults values = F.Molteni paper (Clim.Dyn., 2002)
41    
42    checkpoint46j_post
43    o split calc_exact_eta in 2 S/R : integr_continuity & update_etaH
44    o move wVel computation at the end of the time step, in S/R integr_continuity
45    o create specific S/R to exchange T,S before DYNAMICS (for stagger time step)
46    o update timeave pkg for wVel diagnostic.
47    checkpoint46j_pre
48    
49    checkpoint46i_post
50    o Clean up AIM package (and keep the results unchanged):
51      include CPP_OPTION and use IMPLICT NONE in all routines ;
52      declare all the variables _RL ; use _d 0 for all numerical constants.
53      use ifdef ALLOW_AIM everywhere. And now AIM can be used with g77 !
54    
55    checkpoint46h_post
56    o cleaned up the use of rhoNil and rhoConst.
57      - rhoNil should only appear in the LINEAR equation of state, everywhere
58        else rhoNil is replaced by rhoConst, e.g. find_rho computes rho-rhoConst
59        and the dynamical equations are all divided by rhoConst
60    o introduced new parameter rhoConstFresh, a reference density of fresh
61      water, to remove the fresh water flux's dependence on rhoNil. The default
62      value is 999.8 kg/m^3
63    o cleanup up external_forcing.F and external_forcing_surf.F
64      - can now be used by both OCEANIC and OCEANICP
65    checkpoint46h_pre
66    
67     Added code to convert surface volume flux (fresh water) into
68     a mass flux when using P coordinates in the ocean (OCEANICP).
69     Note: It assumes you have set rho0=rhoConst=density of fresh water.
70    
71    checkpoint46g_post
72    o Include a new diagnostic variable phiHydLow for the ocean model
73      - in z-coordinates, it is the bottom pressure anomaly
74      - in p-coordinates, it is the sea surface elevation
75      - in both cases, these variable have global drift, reflecting the mass
76        drift in z-coordinates and the volume drift in p-coordinates
77      - included time averaging for phiHydLow, be aware of the drift!
78    o depth-dependent computation of Bo_surf for pressure coordinates
79      in the ocean (buoyancyRelation='OCEANICP')
80      - requires a new routine (FIND_RHO_SCALAR) to compute density with only
81        Theta, Salinity, and Pressure in the parameter list. This routine is
82        presently contained in find_rho.F. This routine does not give the
83        correct density for 'POLY3', which would be a z-dependent reference
84        density.
85    o cleaned up find_rho
86      - removed obsolete 'eqn' from the parameter list.
87    o added two new verification experiments: gop and goz
88      (4x4 degree global ocean, 15 layers in pressure and height coordinates)
89    checkpoint46g_pre
90    
91    checkpoint46f_post
92    o Enable tangent linear (forward mode) gradient checks:
93      - extended active file handling to g_... files
94      - added TANGENT_SIMULATION to theSimulationMode
95      - extended grdchk package accordingly
96    o added tangent linear setup in verification/carbon/code_ftl
97    o added adjoint setup in verification/front_relax/code_ad
98    
99    checkpoint46e_post
100  o Added new equation of state -> MDJWF  o Added new equation of state -> MDJWF
101    - EOS of McDougall et al., 2002, JAOT, submitted    - EOS of McDougall et al., 2002, JAOT, submitted
102    - caveat: the equation of state is only valid for a smaller (more    - caveat: the equation of state is only valid for a smaller (more
# Line 12  o Added new equation of state -> MDJWF Line 105  o Added new equation of state -> MDJWF
105    - added more check values for density in check_eos (ini_eos.F), some of    - added more check values for density in check_eos (ini_eos.F), some of
106      the old check values are out of the range of the MDJWF-eos, so don't      the old check values are out of the range of the MDJWF-eos, so don't
107      expect perfect matches for those      expect perfect matches for those
108  checkpoint47d_pre  checkpoint46e_pre
109    
110  checkpoint46d_post  checkpoint46d_post
111  o fixed store_pressure to work with both buoyancy relation = 'OCEANIC' and  o fixed store_pressure to work with both buoyancy relation = 'OCEANIC' and

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