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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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checkpoint40pre9 |
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o added DST advection schemes |
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o fix MPI bug on SGI's |
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o modifications for non-linear free-surface |
| 10 |
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o fixed conditionals for fixed flow/passive tracer only mode |
| 11 |
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o added tension/strain form of stress tensor |
| 12 |
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o changes to commenting of arguments for TAF/TAMC |
| 13 |
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o added/updated many matlab scripts |
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checkpoint40pre8 |
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o new package rw/ |
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Added method for dumping intermediate local arrays: |
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mdsio_writetile - same as mdsio_writefield except works from inside |
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bi,bj loop |
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mdsio_writelocal - same as mdsio_writetile except works for local |
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arrays |
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write_local_r? - higher-level wrapper for mdsio_writelocal |
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Controlled by diagFreq. Defaults to zero (ie. no dumps) |
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Example given at end of mom_vecinv.F that dumps some local arrays. |
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o replaced calc_mom_rhs.F by mom_fluxform.F/mom_vecinc.F to |
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control flux-form versus vector invariant code. |
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Switch is runtime flag vectorInvariantMomentum (defaults to false) |
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or genmake -DISABLE ... |
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o TAMC-related update to cope with mom_fluxform.F/mom_vecinc.F |
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(additional storing is now needed for case vecinv; |
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currently nothing implemented to switch this storing off |
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in case fluxform is used since no CPP flag available). |
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checkpoint40pre7 |
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o bug fix in dynamics.F |
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calc_viscosity called before k=1,Nr loop. |
| 37 |
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o added some #ifdef's ALLOW_PASSIVE_TRACER |
| 38 |
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o cleaned initialisations in ctrl_map_ini |
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related to TAF |
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checkpoint40pre6 |
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o split dynamics into thermodynamics & dynamics |
| 43 |
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o corresponding split of calc_diffusivity into |
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calc_diffusivity, calc_viscosity |
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(kpp_calc_diff, kpp_calc_visc). |
| 46 |
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o Added diffkr, kapgm to control variables |
| 47 |
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o bug fix in gmredi_slope_limit for ldd97 |
| 48 |
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checkpoint40pre5 |
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o proper initialization of Adams-Bashforth time stepping |
| 51 |
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+ uses forward step for very first step of model (iter=0) |
| 52 |
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o re-generated *all* output since almost all output is modified by this |
| 53 |
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change (sorry but we've been putting this one off for about 2 years) |
| 54 |
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+ natl_box, aim.5l_Equatorial_Channel and aim.5l_zon-ave were |
| 55 |
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*not* regenerated since they are already out of date and I don't |
| 56 |
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want to create the impression that they are suddenly working. |
| 57 |
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o removed KAP stuff for DEC's |
| 58 |
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o modified/added many .cvsignore files in */code and */input |
| 59 |
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o added new expt "solid-body.cs-32x32x1" |
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+ this uses an alternative form of ini_curvilinear_grid.F which |
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is not necessarily any better than the current one... |
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checkpoint40pre4 |
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o added re-initialisations of utrans,vtrans,rtrans in |
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calc_common_factors which are crucial for TAF. |
| 66 |
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o extended iMin,jMin range for calc_common_factors, |
| 67 |
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calc_diffusivity |
| 68 |
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o added option ALLOW_PASSIVE_TRACER |
| 69 |
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o a few minor updates and fixes |
| 70 |
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checkpoint40pre3 |
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o created calc_gtr1.F for gad package |
| 73 |
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o split the_main_loop and re-introduced forward_step |
| 74 |
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o some recomputations of nIter0 for TAMC |
| 75 |
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checkpoint40pre2 |
| 77 |
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o Updated to latest branch of AJA, JMC |
| 78 |
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o Added gradient check package |
| 79 |
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o Added routines for passive tracer handling |
| 80 |
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o Added carbon sequestration sensitivity experiment |
| 81 |
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| 82 |
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checkpoint39 |
| 83 |
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o Modifications and fixes to support TAMC |
| 84 |
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(mainly missing or wrong directives) |
| 85 |
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o Corrected common blocks when fooling TAMC to produce adjoint I/O |
| 86 |
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in addummy_in_stepping |
| 87 |
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o Updated verification/vero/ (bug fixes in code/, correct pickups in input/) |
| 88 |
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o Enabled "sliced" (xz-,yz-) exchanges, needed for obcs. |
| 89 |
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o Included following packages: |
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cal: calendar |
| 91 |
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exf: external forcing |
| 92 |
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ecco: essential routines to control use of cal, exf |
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(NB: this is not the full ECCO environment) |
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o disabled some packages by default in genmake |
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checkpoint38 |
| 97 |
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o see notes_c37_adj.txt |
| 98 |
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o corrected wrong layer index in external_forcing_t |
| 99 |
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o replaced the_main_loop/forward_step by the_main_loop |
| 100 |
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o removed forceoutput from write_state |
| 101 |
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(replaced criteria for initial/final state) |
| 102 |
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o added runtime flag for pre-C35 pickups: usePickupBeforeC35 |
| 103 |
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| 104 |
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checkpoint37 |
| 105 |
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o mdsio.F routine split and packaged in pkg/mdsio |
| 106 |
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(mdsio.F and mdsio_gl.F still exist in eesupp/src but are not |
| 107 |
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used unless genmake -disable=mdsio) |
| 108 |
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o allow a more precise surface-geopotential gradient for the atmosphere |
| 109 |
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taking into account the change in space of Alpha (=1/rho) at the surface. |
| 110 |
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o variable "etaN" (replace cg2d_x) is the surface R-anomaly [r unit] |
| 111 |
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(ocean: sea surface height [m] / atmos: surface pressure anomaly [Pa]) |
| 112 |
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o Change units: Phi_Hydrostatic (=phiHyd), Phi_Surface(=cg2d_x) and |
| 113 |
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Phi_NonHydrostatic (=cg3d_x), all have now the dimension of a potential |
| 114 |
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[m2/s2] (pressure/rhoConst in the ocean ; Geo-Potential in the atmosphere). |
| 115 |
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o Time-Average diagnostics defined as a pseudo package "timeave". |
| 116 |
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o pickup files : old pickup (before c35) did not work with new code (c35 |
| 117 |
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and after) unless activating 2 commented lines in initialise-varia. |
| 118 |
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o Non-Hydrostatic pickup file Pb fixed. |
| 119 |
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o bug with Rigid-lid version (since c35) fixed. |
| 120 |
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| 121 |
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checkpoint36 |
| 122 |
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o implement Crank-Nickelson barotropic time-stepping |
| 123 |
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o recover Time-Average diagnostics |
| 124 |
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o fix Pb in checkpoint (PR#19) |
| 125 |
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o AIM become a standard package ; clean unused CPP_kees |
| 126 |
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| 127 |
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checkpoint35 |
| 128 |
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o subtantial rewrite of dynamics.f |
| 129 |
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o allows staggered time-stepping |
| 130 |
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o packaged obcs, aim (Atmospheric Physics), zonal_filt, shap_filt |
| 131 |
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o added bottom drag (linear + quadratic) |
| 132 |
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| 133 |
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checkpoint34 |
| 134 |
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o Modified exchange routines for correct reverse simulation. |
| 135 |
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o Added verification output to comply with bug fix in impldiff.F |
| 136 |
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as of c33 (exp2, natl_box). |
| 137 |
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o Corrected store directives in dynamics.F |
| 138 |
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o Corrected array boundaries in impldiff.F |
| 139 |
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o Corrected array dimensions in gmredi. |
| 140 |
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Added temporary scalars to avoid storage by TAMC (gmredi, kpp). |
| 141 |
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o Added routine GLOBAL_SUM_INT to global_sum.F |
| 142 |
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o Added mdsio_gl.F for ECCO purposes. |
| 143 |
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| 144 |
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checkpoint33 |
| 145 |
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o Fixed bug in lower BC in impldiff.F |
| 146 |
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o Fixed confusion about units of forcing arrays in FFIELDS.h |
| 147 |
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namely Fu,Fv,Qnet,Qsw,EmPmR: |
| 148 |
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- Removed verification/natl_box/code/external_fields_scale.F |
| 149 |
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(did not differ from that in model/src) |
| 150 |
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- Changed units of fu,fv,Qnet,Qsw,EmPmR back to proper units |
| 151 |
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(see FFIELDS.h for description) |
| 152 |
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- Scale fu,fv,Qnet,Qsw,EmPmR when used in external_forcing_surf.F, |
| 153 |
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kpp_calc.F and kpp_transport_t.F |
| 154 |
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- Removed model/src/external_fields_scale.F and calls to it |
| 155 |
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- verification/natl_box uses flux data with "atmospheric" sign so |
| 156 |
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a special version of external_fields_load.F is used to |
| 157 |
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change the data as it's read in. This way, the arrays |
| 158 |
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have the right units and signs at all times tha a user could |
| 159 |
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possibly use them. |
| 160 |
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o Corrected genmake to delete a temporary file during configuration |
| 161 |
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| 162 |
checkpoint32 |
checkpoint32 |
| 163 |
o Scaling of forcing fields moved from external_forcing.F to |
o Scaling of forcing fields moved from external_forcing.F to |
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external_fields_scale.F, called directly after loading fields. |
external_fields_scale.F, called directly after loading fields. |
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