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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o pkg/diagnostics: 2 new S/R to fill a diagnostics using a scaling factor |
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and/or using a fraction-weight field. |
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o fix aim_diagnostics_init.F mate numbers. |
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o add mnc output capability to diagnostics/diagstat and update |
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our cvsignore files for the ACSII output generated |
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checkpoint57k_post |
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o lab_sea now uses diagnostics package and provides a suite of |
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new EXF diagnostics output. |
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checkpoint57j_post |
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o exf |
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* bug fix in exf_bulkformulae for psimh (spotted by Eliyahu Biton): |
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Bracket missing in eqn. for psimh (eqn. 7 of Large & Pond, 1982); |
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terms -2*ATAN(x) + pi/2 were added to both stable and unstable case. |
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* extended diagnostics output |
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- now includes all EXF variables |
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- hs, hl moved to common block |
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- separate S/R for diagnostics, called after ctrl vector is added |
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- name changed for EXFsw -> EXFswnet, EXFlw -> EXFlwnet |
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- EXFqnet contains true Qnet (i.e. includes qsw) |
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* updated verif. lab_sea, global_with_exf |
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* Rearranging hflux (exf_mapfields -> exf_getforcing) |
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to ensure that diagnostics sees a true EXFqnet |
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o add matlab scripts for CS-grid vectors (in utils/cs_grid) |
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o diagnostics pkg: change pointers so that 1 diagnostic can be used |
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several times with different frequencies. |
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o mnc-ify the thsice package as requested by Daniel Enderton |
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- the monitor--MNC output needs work |
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- many attributes need to be added (most are currently blank) |
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o mnc-ify theaim_v23 package as requested by Daniel Enderton |
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- many attributes need to be added (most are currently blank) |
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o remove "groundAtK1" & "rkFac" (replaced by usingPCoords & -rkSign) |
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o add Sadourny like discretization to the 4th.O vorticity advection scheme |
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o fix bug in rStar code (calc_r_star.F) when used with topo/bathy. |
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update output.txt from: aim.5l_cs (& .thSI), cpl_aim+ocn, |
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fizhi-gridalt-hs and global_ocean.cs32x15 (& .thsice). |
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o fix few little things to avoid floating error with -ftrapuv (ifort v9) |
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(ini_spherical_polar_grid.F, calc_r_star.F, monitor/mon_surfcor.F) |
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checkpoint57i_post |
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o Diagnostics package was changed: diagnostic allocation is now deactivated |
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by setting an empty file name in the namelist (used to be by setting 0 frequency) |
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o momentum advection (VI form) options: activate 4th.O vorticity Coriolis ; |
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add 1rst Order upwind vertical Shear. |
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o add a quick fix for A/B checkpointing in OFFLINE mode |
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o add IGNORE_TIME define and -ignore_time option to genmake2 as an |
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end-run around the C/Fortran linking horror in eesup/src/timers.F |
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o added pkg/runclock: allows user to terminate run based on wall clock |
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o added non-hydrostatic scaling parameter: nh_am2 |
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o pkg/my82: futile attempt to make results compiler-independent by adding |
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some "_d 0", etc. no effect. |
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o for mnc output, fill the 'T' coordinate var with myTime and create a |
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separate 'iter' variable for iteration count |
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o pkg/diagnostics: |
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add new capability: output of Global/Regional & per-level statistics ; |
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tested against monitor output (including land & thSIce) on various exp. |
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o make seaice-pkg I/O type flags (MNC/MDS) more standard. |
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checkpoint57h_done |
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tag after changing user customized files (DIAGNOSTICS_SIZE.h, |
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data.diagnostics, data.gchem, data.ptracers) is done. |
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o pkg/diagnostics: prepare for Global/Regional statistics. |
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add 2nd namelist in data.diagnostics and update DIAGNOSTICS_SIZE.h |
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o remove "baseTime" (no used) from arg. list of DIFF_BASE_MULTIPLE |
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and rename it: DIFFERENT_MULTIPLE |
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checkpoint57h_post |
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o move tIter0 from data.gchem to PTRACERS_Iter0 in data.ptracers |
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o pkg/diagnostics: change output frequency, now in seconds (instead |
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of Nb of iterations). This requires to change data.diagnostics. |
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checkpoint57h_pre |
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o in mnc, let the user create the output dir if both mnc_outdir_date |
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and mnc_outdir_num are false |
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o add fflags() to pkg/diagnostics which allows one to specify, on a |
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per-file basis, the file precision [default behavior is unchanged] |
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o added diagnostics to pkg/kpp, including computation of mixed layer |
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depth based on a temperature/density criterion |
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o updated verification/natl_box to test the new pkg/kpp diagnostics |
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o bugs fixed (with useAbsVorticity=T & with useJamartMomAdv=T) |
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o test AB-3 code with 4th.Order advection scheme (advect_xy/input.ab3_c4) |
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o fix mnc flags in pkg/seaice so that they are "owned" by seaice, |
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not mnc -- this mistake was found by JMC and is now corrected |
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checkpoint57g_post |
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o add Adams-Bashforth 3rd Order time stepping: |
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- default remains AB-2 (#undef ALLOW_ADAMSBASHFORTH_3) |
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- not yet implemented with NH, CD_Scheme, pTracers, MNC_pickup ... |
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checkpoint57g_pre |
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o make lambda[Theta,Salt]ClimRelax spatially varying |
o make lambda[Theta,Salt]ClimRelax spatially varying |
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(default remains spatially uniform constant based on tau) |
(default remains spatially uniform constant based on tau) |
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o added new control variables |
o added new control variables |
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