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revision 1.1458 by heimbach, Sun Jun 19 18:21:32 2011 UTC revision 1.1459 by jmc, Tue Jun 21 15:15:10 2011 UTC
# Line 14  o pkg/seaice: Line 14  o pkg/seaice:
14   - modified diag: SIdA; output actual effect, as the description states.   - modified diag: SIdA; output actual effect, as the description states.
15   - modified description: SIqneti, SIqneto, SIuheff, SIvheff, SIdAb*, HSNOW.   - modified description: SIqneti, SIqneto, SIuheff, SIvheff, SIdAb*, HSNOW.
16   - retired redundant diags: SIyneg, SIfice, SIsnwice, SIthdgrh.   - retired redundant diags: SIyneg, SIfice, SIsnwice, SIthdgrh.
17     (SIyneg->SIdHbOCN; SIfice->SIdHbATC; SIsnwice->SIdHbFLO;     (SIyneg->SIdHbOCN; SIfice->SIdHbATC; SIsnwice->SIdHbFLO;
18      and SIthdgrh->SIdHbOCN+SIdHbATC+SIdHbATO)      and SIthdgrh->SIdHbOCN+SIdHbATC+SIdHbATO)
19   - modified diags (2) : switch all SIdA*, SIdH*, SIdS* from delta to rates.   - modified diags (2) : switch all SIdA*, SIdH*, SIdS* from delta to rates.
20   - added diagnostics for seaice genereic tracers (SItr*).   - added diagnostics for seaice generic tracers (SItr*).
21   - added SItrUnit and SItrNameLong run time param (for SItr* diags).   - added SItrUnit and SItrNameLong run time param (for SItr* diags).
22   - in diag names, replaced 'PrTh' abbrev. of 'preceeding thermo' with 'PT'.   - in diag names, replaced 'PrTh' abbrev. of 'preceeding thermo' with 'PT'.
23   I. Fenty: 18-Jun-2011:   I. Fenty: 18-Jun-2011:
24   Minor changes to seaice package:   Minor changes to seaice package:
25   1) Retired old variables (A22, SEAICE_lhsublim, areaMax, areaMin, hiceMin) and   1) Retired old variables (A22, SEAICE_lhsublim, areaMax, areaMin, hiceMin) and
26      added some new ones (SEAICE_area_reg, SEAICE_hice_reg, SEAICE_area_floor)      added some new ones (SEAICE_area_reg, SEAICE_hice_reg, SEAICE_area_floor)
27     - Differentiated "regularization variables" from "floor variables"     - Differentiated "regularization variables" from "floor variables"
28      * areaMin became SEAICE_area_reg (old A22) and SEAICE_area_floor      * areaMin became SEAICE_area_reg (old A22) and SEAICE_area_floor
29      * hiceMin became SEAICE_hice_reg (old hiceMin)      * hiceMin became SEAICE_hice_reg (old hiceMin)
30        (with _reg meaning regularization variable)        (with _reg meaning regularization variable)
31     - SEAICE_lhSublim becomes lhSublim, the sum of SEAICE_lhEvap and SEAICE_lhFusion     - SEAICE_lhSublim becomes lhSublim, the sum of SEAICE_lhEvap and SEAICE_lhFusion
32      so as to ensure energy conservation when going between phases      so as to ensure energy conservation when going between phases
33    - A22 was not used anywhere    - A22 was not used anywhere
34   2) Changed regularization procedure for heffActual and hsnowActual to ensure   2) Changed regularization procedure for heffActual and hsnowActual to ensure
35      well-boundedness and smooth adjoint in seaice_growth.F      well-boundedness and smooth adjoint in seaice_growth.F
36   3) Fixed a bug where seaice_solve4temp would not recognize ice-free grid cells   3) Fixed a bug where seaice_solve4temp would not recognize ice-free grid cells
37      because the old regularization always set heffActual >= 0.05 cm      because the old regularization always set heffActual >= 0.05 cm
38   4) Changed the model so that the default behavior is to put a small (10^-5) "floor"   4) Changed the model so that the default behavior is to put a small (10^-5) "floor"
39      on AREA when HEFF > 0.        on AREA when HEFF > 0.
40    - went from requiring ALLOW_PRECLUDE_INFINITESIMAL_AREA to be defined to    - went from requiring ALLOW_PRECLUDE_INFINITESIMAL_AREA to be defined to
41      requiring that DISABLE_AREA_FLOOR *not* be defined          requiring that DISABLE_AREA_FLOOR *not* be defined
42   Affected verifications:   Affected verifications:
43    - 1D_ocean_ice_column (output.txt output_adm.txt)    - 1D_ocean_ice_column (output.txt output_adm.txt)
44    - global_ocean.cs32x15 (output.seaice.txt output_adm.seaice.txt)    - global_ocean.cs32x15 (output.seaice.txt output_adm.seaice.txt)
# Line 49  o pkg/diagnostics: Line 49  o pkg/diagnostics:
49    - add pieces of code to compute velocity potential at each level (new diagnostics    - add pieces of code to compute velocity potential at each level (new diagnostics
50      PhiVEL, works only when UVELMASS & VVELMASS are also turned on);      PhiVEL, works only when UVELMASS & VVELMASS are also turned on);
51      for now, using same params as CG2D (target-resisual, max Nb of iter ...).      for now, using same params as CG2D (target-resisual, max Nb of iter ...).
52      - fix few issues with counter diagnostics in diagnostics_setdiag.F &
53        diagstats_setdiag.F (if diagnostic counter is itself a counter diag)
54        and in diagnostics_fract_fill.F (do not need a valid pointer for the
55        diagnostics counter-mate); check that definition of counter-diagnostic
56        includes a valid counter-mate (in diagnostics_set_levels.F).
57  o model/src (rStar):  o model/src (rStar):
58    - add rStar scaling factor in diags_phi_hyd.F (similar to calc_grad_phi_hyd.F);    - add rStar scaling factor in diags_phi_hyd.F (similar to calc_grad_phi_hyd.F);
59      affect solution only if z* with full pressure in EOS;      affect solution only if z* with full pressure in EOS;
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