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Revision 1.53.2.18 - (show annotations) (download)
Sun Jan 12 08:20:09 2003 UTC (21 years, 4 months ago) by dimitri
Branch: release1
Changes since 1.53.2.17: +6 -1 lines
  - improved description of the various forcing configurations
  - added basic radiation bulk formulae to pkg/exf

1 $Header: /u/gcmpack/MITgcm/doc/tag-index,v 1.53.2.17 2002/12/27 08:01:54 dimitri Exp $
2
3 Notes on tags used in MITgcmUV
4 ==============================
5
6 release1_??? (not taged yet)
7 o modifications for using pkg/exf with pkg/seaice
8 - improved description of the various forcing configurations
9 - added basic radiation bulk formulae to pkg/exf
10
11 release1_p10
12 o modifications for using pkg/exf with pkg/seaice
13 - pkg/seaice CPP options SEAICE_EXTERNAL_FORCING
14 and SEAICE_EXTERNAL_FLUXES
15 - pkg/exf CPP options EXF_READ_EVAP and
16 EXF_NO_BULK_COMPUTATIONS
17 - usage examples are Experiments 8 and 9 in
18 verification/lab_sea/README
19 - verification/lab_sea default experiment now uses
20 pkg/gmredi, pkg/kpp, pkg/seaice, and pkg/exf
21
22 release1_p9
23 o pkg/seaice
24 - removed GOTO's and added taf directives
25 - double precision constants to reduce the g77 (Linux)
26 to F77 (SGI) differences reported in release1_p8
27 o tools/genmake
28 - added SGI options
29 o verification/testscript
30 - updated to that of checkpoint47a_post
31 o verification/global_ocean.90x40x15/input/eedata
32 - modified for SGI f77 compatibility
33 o verification/lab_sea
34 - added description of sea-ice model
35 - added missing matlab routines
36 - added test of thermodynamics parallelization
37
38 release1_p8
39 o verification/natl_box:
40 updating new external_fields_load routine
41 o New package: pkg/seaice
42 Sea ice model by D. Menemenlis (JPL) and Jinlun Zhang (Seattle).
43 The sea-ice code is based on Hibler (1979-1980).
44 Two sea-ice dynamic solvers, ADI and LSR, are included.
45 In addition to computing prognostic sea-ice variables and diagnosing
46 the forcing/external data fields that drive the ocean model,
47 SEAICE_MODEL also sets theta to the freezing point under sea-ice.
48 The implied surface heat flux is then stored in variable
49 surfaceTendencyTice, which is needed by KPP package (kpp_calc.F and
50 kpp_transport_t.F) to diagnose surface buoyancy fluxes and for the
51 non-local transport term. Because this call precedes model
52 thermodynamics, temperature under sea-ice may not be "exactly" at
53 the freezing point by the time theta is dumped or time-averaged.
54 N.B.: fairly large differences in accuracy occur across
55 different platforms/compilers; comparison between
56 g77 (Linux) and F77 (SGI Origin 2000/MIPSpro)
57 generated output gives:
58 T S U V
59 C D M c m s m s m s m s
60 n p a R g m m e . m m e . m m e . m m e .
61 f n k u 2 i a a d i a a d i a a d i a a d
62 g d e n d n x n . n x n . n x n . n x n .
63
64 Y Y Y Y 5 5 7 7 7 8 10 9 6 6 6 6 7 5 7 5 7 FAIL lab_sea
65
66
67 release1_p7
68 o GAD:
69 - generated new common blocks to account for call of
70 same gad routines with differing traceridentities
71 (needed to modify tracerIdentity indices in GAD.h)
72 - generated separate common blocks for case useCubedSphereExchange
73 (Department of Futurology)
74 - parameter lists to gmredi_?transport: added tracerIdentity
75 - added new key indices to tamc.h
76 o external_fields_load:
77 - added this routine to TAF list
78 - needed to make some common blocks global and additional storing
79 along the same lines as exf package (checkpoint_lev?_directives.h)
80 o exf:
81 updated external forcing package
82 - bug fixes carried over from ecco-branch
83 (missing OBCS_OPTIONS.h in two routines)
84 - enable easy to use "no forcing".
85 - added exf I/O for atmospheric loading
86 - added exf I/O for runoff data
87 - transfered scaling between exf <-> MITgcm to exf namelist
88 o Adding new verification experiment global_with_exf.
89 This verification experiment is almost identical to the
90 global_ocean.90x40x15 experiment, except that it uses
91 the exf (and cal) package instead of the
92 external_fields_load routine (cf README file).
93
94 release1_p6
95 o fixed the verification/global_ocean.90x40x15 experiment:
96 - new bathymetry (the world according to A., JMC, and M.)
97 - new initial fields and forcing fields (*.bin files)
98 - new POLY3.COEFFS (for the next release one should switch to a full
99 equation of state)
100 - fixed several errors and redundancies in the data file
101 - experiment uses looped cells
102 - added matlab directory with diagnostic scripts for plotting of output
103
104 release1_p5
105 o import recent fix from MAIN branch:
106 - use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S
107 - change phiMin in exp1 (to agree with documentation)
108 from checkpoint45 to checkpoint45a_post:
109 - specific exchange for X-slice domain (case Ny=1)
110 - argument futureIter of S/R obcs_calc missing in
111 exp4 & internal_wave /code
112 - solve_for_pressure : set cg2d_x to zero where OBCS are applied
113 from checkpoint44f_post to checkpoint44g_post:
114 - fix surface correction term in multiDimAdvection
115 (affects plume_on_slope results
116 o bug fix in packages_readparms (missing ALLOW_CALENDAR)
117 o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM
118 o Adjoint-related bug fixes in kpp:
119 - kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix
120 - kpp_routines: store of Rib avoids partial recomputation bug of TAF.
121 o added Eliassen-Palm flux hooks (dynamics,ini_fields)
122 o removed unused TAF keys iikey, idkey (dynamics,thermodynamics)
123 o flow directives:
124 - new for S/R do_the_model_io
125 - enhanced for S/R checkpoint
126 o added Eliassen Palm flux controls to gradient check package
127 o new ctrl package
128 - adopted from ECCO environment to enable optimization
129 - added Eliassen Palm fluxes to controls
130 - adjusted global_ocean.90x40x15/ and carbon/ accordingly
131
132 release1_p4
133 o Removed f90 comments ("!")
134 o Modified initialisations to enable exf package for MITgcm
135 (without invoking ECCO_PACKAGE).
136 o modifications to gradient check package (Martin Losch)
137 - enable centered differences
138 - modified format of standard output
139
140 release1_p3
141 o added tangent linear setup to verification/carbon/
142 o added adjoint sensitivity setup to verification/global_ocean...
143 o moved packages_init_variables before convective_adjustment
144 o output of verif. which use GMRedi brought up-to-date with
145 MAIN trunk (those were re-created after changes in GMRedi)
146 o included CPP option SINGLE_LAYER_MODE
147 to configure barotropic setup (Martin Losch).
148 o Removed auxiliary variable in impldiff
149 (caused numerical differences with MAIN trunk routine).
150 o Introduced CPP option ALLOW_AUTODIFF_MONITOR to
151 disable adcommon.h/g_common.h by default.
152 o Cleaned exchange calls in cg2d.
153
154 release1_p2
155 o fixed array boundary problem for adjoint
156 (related to partial recomputation within subroutine
157 related to dynamics -> calc_viscosity -> mom_...
158 o fixed recomputation in thermodynamics
159 o prepare (but not complete) recomputation problem in impldiff
160 o fixed problem for adjoint of global_max
161 o switched off sponge layer code in external_forcing
162
163 release1_p1
164 o merged necessary patches:
165 - AD-related changes for GMRedi
166 - fixes i KPP (delZ -> drF)
167 - hook to OBCS songe layer code in external_forcing
168 - errorMessageUnit non-zero in eeboot.F
169 - modified test cost function and carbon verif.
170
171 release1_chkpt44d_post = chkpt44d_post
172
173 chkpt44d_pre,post
174 o added missing EXCLUDE_MONITOR flags
175 o changed "e" to "_d" in gmredi_slope_limit, gmredi_slope_psi
176 (incompatible typ in MIN/MAX expressions caused problems
177 on IBM SP3)
178 o in genmake added variable MAKEDEPEND
179 plus resetting for case SunOS
180 o added timer_stats.c routine for IBM SP3
181 o removed variables in dynamics
182
183 o real fresh water flux implemented with non-linear free-surface.
184
185 chkpt44c_pre,post
186 o few fix (mask in shap_s2, EmPmR in external_field_load,
187 USE_NATURAL_BCS in solve_for_P);
188 o add arguments myIter & myTime to S/R obcs_calc & solve_for_P
189
190 checkpoint44b_pre/_post
191 o merge of relevant stuff from the ecco-branch:
192 - genmake: removed $S64 overwrite for case SunOS
193 - pkg/exf: update and corrections for field swapping and obcs
194 - pkg/ecco: parameter lists for the_model_main, the_main_loop
195 harmonized between ECCO and MITgcm
196 - pkg/autodiff: added flow directives for obcs, mdsio_gl_slice
197 updated checkpointing_lev... lists for obcs
198 - model/src: minor changes in forward_step, plot_field
199 added directive for divided adjoint in the_main_loop
200 - pkg/mdsio: added mdsio_gl_slice
201
202 o check parameters & config (chkpt44a_pre,post)
203 o OBC and NonLin_FrSurf.
204
205 checkpoint44
206 o fix bug in mom_vi_del2uv
207 o select when filters are applied ; add options to zonal_filter (data.zonfilt)
208 o gmredi: fix Pb in the adiabatic form ; add options (.e.g. Bolus advection)
209 o update AIM experiments (NCEP input files)
210 o improve and extend diagnostics (Monitor, TimeAve with NonLin-FrSurf)
211 o added some stuff for AD
212
213 checkpoint43
214 o added two new advection tests
215 o added global 4x4 degree ocean test
216 o added test of H&S94 with free surface on cube
217 o some final mods for gradient check, adjoint,...
218
219 checkpoint42
220 Fixed AD-related problems:
221 o Store directives up-to-date with re-arranged Adams-Bashforth
222 (mainly thermodynamics.F)
223 o New store directives for multi-dim. advection schemes
224 * new CPP flag ALLOW_MULTI_DIM_ADVECTION
225 * new common block and key passkey
226 (mainly gad_advection.F)
227 o Modified store directives for split of dynamics/thermodynamics
228 for the case ALLOW_KPP
229 o Cleaned argument list for timestep_tracer.F
230
231 checkpoint41
232 o re-formatted/added comments in prologues of key subroutines
233 to work with protex
234
235 checkpoint40
236 o moved calc_gs, calc_gt and calc_tr1 back to model/src
237 o added FLT (floats) package from Arne along with demo. experiment
238 o re-arranged Adams-Bashforth scheme for tracers to allow easier
239 implementation of forward-in-time forcing terms
240 o more mods for non-linear free-surface including new variable
241 o modified multi-dim method to work on cube
242 o bug fix in KPP (from DM)
243
244 checkpoint40pre9
245 o added DST advection schemes
246 o fix MPI bug on SGI's
247 o modifications for non-linear free-surface
248 o fixed conditionals for fixed flow/passive tracer only mode
249 o added tension/strain form of stress tensor
250 o changes to commenting of arguments for TAF/TAMC
251 o added/updated many matlab scripts
252 o added multi-dimensional advection method for tracers
253
254 checkpoint40pre8
255 o new package rw/
256 Added method for dumping intermediate local arrays:
257 mdsio_writetile - same as mdsio_writefield except works from inside
258 bi,bj loop
259 mdsio_writelocal - same as mdsio_writetile except works for local
260 arrays
261 write_local_r? - higher-level wrapper for mdsio_writelocal
262 Controlled by diagFreq. Defaults to zero (ie. no dumps)
263 Example given at end of mom_vecinv.F that dumps some local arrays.
264 o replaced calc_mom_rhs.F by mom_fluxform.F/mom_vecinc.F to
265 control flux-form versus vector invariant code.
266 Switch is runtime flag vectorInvariantMomentum (defaults to false)
267 or genmake -DISABLE ...
268 o TAMC-related update to cope with mom_fluxform.F/mom_vecinc.F
269 (additional storing is now needed for case vecinv;
270 currently nothing implemented to switch this storing off
271 in case fluxform is used since no CPP flag available).
272
273 checkpoint40pre7
274 o bug fix in dynamics.F
275 calc_viscosity called before k=1,Nr loop.
276 o added some #ifdef's ALLOW_PASSIVE_TRACER
277 o cleaned initialisations in ctrl_map_ini
278 related to TAF
279
280 checkpoint40pre6
281 o split dynamics into thermodynamics & dynamics
282 o corresponding split of calc_diffusivity into
283 calc_diffusivity, calc_viscosity
284 (kpp_calc_diff, kpp_calc_visc).
285 o Added diffkr, kapgm to control variables
286 o bug fix in gmredi_slope_limit for ldd97
287
288 checkpoint40pre5
289 o proper initialization of Adams-Bashforth time stepping
290 + uses forward step for very first step of model (iter=0)
291 o re-generated *all* output since almost all output is modified by this
292 change (sorry but we've been putting this one off for about 2 years)
293 + natl_box, aim.5l_Equatorial_Channel and aim.5l_zon-ave were
294 *not* regenerated since they are already out of date and I don't
295 want to create the impression that they are suddenly working.
296 o removed KAP stuff for DEC's
297 o modified/added many .cvsignore files in */code and */input
298 o added new expt "solid-body.cs-32x32x1"
299 + this uses an alternative form of ini_curvilinear_grid.F which
300 is not necessarily any better than the current one...
301
302 checkpoint40pre4
303 o added re-initialisations of utrans,vtrans,rtrans in
304 calc_common_factors which are crucial for TAF.
305 o extended iMin,jMin range for calc_common_factors,
306 calc_diffusivity
307 o added option ALLOW_PASSIVE_TRACER
308 o a few minor updates and fixes
309
310 checkpoint40pre3
311 o created calc_gtr1.F for gad package
312 o split the_main_loop and re-introduced forward_step
313 o some recomputations of nIter0 for TAMC
314
315 checkpoint40pre2
316 o Updated to latest branch of AJA, JMC
317 o Added gradient check package
318 o Added routines for passive tracer handling
319 o Added carbon sequestration sensitivity experiment
320
321 checkpoint39
322 o Modifications and fixes to support TAMC
323 (mainly missing or wrong directives)
324 o Corrected common blocks when fooling TAMC to produce adjoint I/O
325 in addummy_in_stepping
326 o Updated verification/vero/ (bug fixes in code/, correct pickups in input/)
327 o Enabled "sliced" (xz-,yz-) exchanges, needed for obcs.
328 o Included following packages:
329 cal: calendar
330 exf: external forcing
331 ecco: essential routines to control use of cal, exf
332 (NB: this is not the full ECCO environment)
333 o disabled some packages by default in genmake
334
335 checkpoint38
336 o see notes_c37_adj.txt
337 o corrected wrong layer index in external_forcing_t
338 o replaced the_main_loop/forward_step by the_main_loop
339 o removed forceoutput from write_state
340 (replaced criteria for initial/final state)
341 o added runtime flag for pre-C35 pickups: usePickupBeforeC35
342
343 checkpoint37
344 o mdsio.F routine split and packaged in pkg/mdsio
345 (mdsio.F and mdsio_gl.F still exist in eesupp/src but are not
346 used unless genmake -disable=mdsio)
347 o allow a more precise surface-geopotential gradient for the atmosphere
348 taking into account the change in space of Alpha (=1/rho) at the surface.
349 o variable "etaN" (replace cg2d_x) is the surface R-anomaly [r unit]
350 (ocean: sea surface height [m] / atmos: surface pressure anomaly [Pa])
351 o Change units: Phi_Hydrostatic (=phiHyd), Phi_Surface(=cg2d_x) and
352 Phi_NonHydrostatic (=cg3d_x), all have now the dimension of a potential
353 [m2/s2] (pressure/rhoConst in the ocean ; Geo-Potential in the atmosphere).
354 o Time-Average diagnostics defined as a pseudo package "timeave".
355 o pickup files : old pickup (before c35) did not work with new code (c35
356 and after) unless activating 2 commented lines in initialise-varia.
357 o Non-Hydrostatic pickup file Pb fixed.
358 o bug with Rigid-lid version (since c35) fixed.
359
360 checkpoint36
361 o implement Crank-Nickelson barotropic time-stepping
362 o recover Time-Average diagnostics
363 o fix Pb in checkpoint (PR#19)
364 o AIM become a standard package ; clean unused CPP_kees
365
366 checkpoint35
367 o subtantial rewrite of dynamics.f
368 o allows staggered time-stepping
369 o packaged obcs, aim (Atmospheric Physics), zonal_filt, shap_filt
370 o added bottom drag (linear + quadratic)
371
372 checkpoint34
373 o Modified exchange routines for correct reverse simulation.
374 o Added verification output to comply with bug fix in impldiff.F
375 as of c33 (exp2, natl_box).
376 o Corrected store directives in dynamics.F
377 o Corrected array boundaries in impldiff.F
378 o Corrected array dimensions in gmredi.
379 Added temporary scalars to avoid storage by TAMC (gmredi, kpp).
380 o Added routine GLOBAL_SUM_INT to global_sum.F
381 o Added mdsio_gl.F for ECCO purposes.
382
383 checkpoint33
384 o Fixed bug in lower BC in impldiff.F
385 o Fixed confusion about units of forcing arrays in FFIELDS.h
386 namely Fu,Fv,Qnet,Qsw,EmPmR:
387 - Removed verification/natl_box/code/external_fields_scale.F
388 (did not differ from that in model/src)
389 - Changed units of fu,fv,Qnet,Qsw,EmPmR back to proper units
390 (see FFIELDS.h for description)
391 - Scale fu,fv,Qnet,Qsw,EmPmR when used in external_forcing_surf.F,
392 kpp_calc.F and kpp_transport_t.F
393 - Removed model/src/external_fields_scale.F and calls to it
394 - verification/natl_box uses flux data with "atmospheric" sign so
395 a special version of external_fields_load.F is used to
396 change the data as it's read in. This way, the arrays
397 have the right units and signs at all times tha a user could
398 possibly use them.
399 o Corrected genmake to delete a temporary file during configuration
400
401 checkpoint32
402 o Scaling of forcing fields moved from external_forcing.F to
403 external_fields_scale.F, called directly after loading fields.
404 o Surface relaxation terms added to surface tendency fields in
405 extra subroutine.
406 o impldiff.F changed to avoid storing by TAMC of huge intermediate
407 fields.
408 o Changes in GMRedi to comply with packaging structure.
409 o Modifications and bug fixes in KPP package.
410 o Verification experiment for KPP added (verification/nat_box/)
411
412 checkpoint31
413 o Packages interface brought in line with defined standard
414 -> new routines packages_...F
415 -> changes in initialise_fixed.F, initialise_varia.F
416 -> enables initialisation interface for ECCO package
417 o Rescaling of external forcing fields immediately after read
418 (removed from external_forcing.F)
419 -> new: surface_fields_scale.F
420 -> affects ini_foorcing.F, external_fields_load.F
421 o Computation of surface tendencies before tendency updates.
422 -> new: external_forcing_surf.F
423 o Change of variable names useGMRedi, useKPP, useECCO
424 o Further changes in dynamics.F, impldiff.F for TAMC
425 o Tested for experiments 0, 2, 4.
426 - not yet tested for GMRedi.
427 - not yet tested for KPP.
428
429 checkpoint30
430 o Updates for OBCs
431 o New experiment for test OBCs (internal_wave)
432 o New output.txt in verification/exp4/results/
433 o Updates for KPP: calculation of viscosity corrected, new variables
434 kpp_dumpFreq and kpp_taveFreq
435 o CPP'd calls to system routines for TARGET_CRAY_VECTOR (P.H.)
436 and entry for T90 in genmake
437
438 checkpoint29
439 o packaged KPP and GM/Redi
440
441 checkpoint28
442 o Corrected initialization of hFacMin for difference vertical coordinates
443 o Modified calculation of partial cell thickness to more robust algorithm
444 o config_summary.F: replaced write_1D_... by write_0D_...
445 read_write.F: added subroutines write_0D_...
446 o routines calc_common_factors, calc_gs, calc_gt, calc_phi_hyd, find_rho:
447 included some initialisations required for TAMC.
448 o routine calc_isoslopes: modified sqrt computation to make it
449 differentiable for zero argument.
450 o routines dynamics, impldiff:
451 included store directives and tape key computations required for TAMC.
452 o ALL TAMC related changes are between ifdef ALLOW_AUTODIFF_TAMC
453
454 checkpoint27
455 o fixed calc_isoslopes() to so that cancellation of terms in tensor
456 formulation works properly with variable resolution.
457 o restructured the calling tree between the_model_main() and dynamics()
458 o split initialise() into initialise_fixed() and initialise_varia()
459 o introduced initialization file pSurfInitFile for free surface (cg2d_x)
460 in new routine ini_psurf()
461
462 checkpoint26
463 o moved some #ifdef in optional routines to encompass everything
464 except the argument declarations. This was using up some memory.
465 o fixed macros like _ADT to work with both versions of Linux cpp
466 o cleaned up some unused and uninitialized variables
467 (helps when debugging with strict compile options)
468 o split up CPP_EEOPTIONS.h into options and macros
469 (macros are now in eesupp/inc/CPP_EEMACROS.h)
470 o patch for 2 processor JAM mode
471
472 checkpoint25
473 o updates for OBCs and NH
474 o dramatically reduced memory usage
475 o added "JAM" routines for use on Artic network
476 o parameterization of convection by implicit vertical diffusion
477 o added a diagnostic of convective index
478 o moved call to calc_divg_hat() from dynamics() to solve_for_pressure()
479 (this is was partly for OBCs and NH but also in anticipation of
480 an explicit free-surface option)
481 o initial state input files for U and V
482
483 checkpoint24
484 o Removed some spurious "REAL"s
485 o Updated KPP to latest version from JPL
486 o Added a COS(latitude) in horizontal viscosity
487
488 checkpoint23
489 o Added del^4 diffusion for salt and temperature
490 o Multiple minor fixes (implicit none's, arguments to global_sum, etc.)
491
492 checkpoint22
493 o Made many small changes: implicit none, format(i5), etc...
494 o Introduced KPP mixing scheme (compiles and runs but *not* tested)
495
496 checkpoint21
497 o Introduced new I/O package that supports direct-access records (mdsio.F)
498 o Split-up mid-level I/O routines
499 o Updated input data for experiments 0,1,2,4 and 5
500 o Finally removed the genmake.* scripts (everyone seems happy with genmake)
501
502 checkpoint20
503 o Tidied up open-boundaries some more
504 o Added non-hydrostatic code
505 o Fixed some input data
506 o Modified MPI start-up to work in "coupled" context.
507
508 checkpoint19
509 o Tidied up directory structure for verification experiments.
510 o Added new code for open boundaries.
511 o Corrected advective terms near boundaries.
512 o Added CPP flag for "old UV" geometry and corrected spherical geometry.
513 o Implemented free-slip/no-slip BCs and del^4 dissipation.
514 o Split default parameters out of ini_parms.F into set_defaults.F.
515
516 checkpoint18
517 o Further changes for optional code generation with
518 CPP - ugh!
519
520 checkpoint17
521 o Beginning to incorporating modularity
522 for supporting atmos. and ocean configs.
523 o Small changes for TAMC complinace
524 o New ultra simple test case. Barotropic box
525 configuration "exp0".
526
527 checkpoint16
528 o Minor changes to exchange routines to support
529 accumulation in reverse mode. Adjoint of an
530 assignment is an addition.
531 o Changes to support compilation by TAMC (LR(1)
532 syntax) and by g77 under Linux ( 72 character
533 limit ).
534
535 checkpoint15
536 Rewrote exchange routines to allow
537 o General tile <-> tile connectivity.
538 o TAMC reverse mode flag ( is this really needed? )
539 o Variable width overlap and exchange region widths.
540 o Hooks for sharing data via DMA, Arctic, Memory Channel,
541 shmput/shmget, VIA, SYSV shmem and every other cool
542 communication method.
543
544 checkpoint14
545 Consistent isomorphism chages made. These allow dynamical core
546 to support both pressure and meters as a vertical coordinate.
547
548 checkpoint13
549 Release which corrects global_max problem and a couple
550 of KGM time-averaging diagnostic errors. Also contains
551 a double-gyre experiment setup as well as the baseline
552 4 degree global template. The double gyre template is
553 organised to allow it to be applied automatically to
554 the baseline configuration.
555
556 branch-point-rdot
557 A few tidy-ups have been made bt the real point of this
558 check-point (excuse the pun) is to allow a branch to be
559 made for the purposes of adding the rDot alterations.
560 I don't want to commit the rDot to the main-trunk until
561 we've actually tested it...
562
563 checkpoint12
564 Tidy up and added generic genmake script (formerly
565 configure script).
566 Released to testers.
567
568 checkpoint11
569 Re-arranged initialise() and introduced ini_vertical_grid()
570 and ini_masks_etc().
571
572 checkpoint10
573 Introduced the configure script.
574 Separated out the diags package.
575 Added template for writing time-averages of tile/intermediate quantities.
576 Updated SIZE.h in exp2 and made the data big-endian.
577
578 checkpoint9
579 MPI fix. Filename changes (meta/data). salbin*y stuff.
580 General tidy-up.
581 SST.bin SSS.bin added to verification/exp2
582
583 checkpoint8
584 Inludes time-dependant forcing and time-averaging.
585 Works at 4x4 and 2.8125x2.8125 global
586
587 checkpoint7-4degree-ref
588 Branch from checkpoint7. Released for application to
589 global modeling and general modeling - process studies, regional
590 model etc..
591 Configured for verification/exp2 - 4 degree global, two process.
592
593 checkpoint7
594 Created by cnh
595 Simple 4 degree global simulation
596 configuration.
597 Includes climatological wind,
598 hydrography, bathymetry etc
599 Does not include Heat Flux and E-P
600
601 checkpoint6
602 Created by cnh
603 merged checkpoint5 with CD and
604 spherical polar code.
605 Still some problems with GM Redi
606 abd full topography.
607
608 checkpoint5
609 Created by AJA
610 contains updates to GM Redi
611 and reordered timestepping loop
612 for Implicit Diffusion.
613
614 checkpoint4
615 Created by cnh
616 Contains memory saving macros ( _rdxc etc..) for when
617 grid variations are limited.
618 Contains polynomial coeffs for EOS and knudsen program
619 for generation.
620
621 checkpoint3
622 Created by cnh
623 Added extra flags for runtime options
624 Added this file
625 Added implicit free-surface
626 Added pre-conditioner
627 Put compare01 into repository ( compare01/... )
628 Put data and eedata into repository ( verification/exp1 )
629
630 checkpoint2
631 Created by AJA
632 Added GM/Redi
633
634 checkpoint1
635 Created by AJA
636 Restructured kloop in dynamics.F
637 Added non-linear EOS
638
639 baseline
640 Original checked in code

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