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revision 1.765 by jmc, Fri Jan 12 19:18:24 2007 UTC revision 1.804 by mlosch, Tue May 1 04:10:31 2007 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/seaice: some parameter clarifications and a little bit of clean up
8    o pkg/thsice: rename run-time parameters:
9       himin       -> hIceMin
10       himin0      -> hThinIce
11       hihig       -> hThickIce
12       i0          -> i0swFrac
13       transCoef   -> bMeltCoef
14       frac_energy -> fracMelting
15      add new parameters: hNewIceMax, fracFreezing, dhSnowLin
16       with default values (for now) that do not change the results.
17      remove old version of thsice vars advection in pkg/seaice.
18    o in FFIELDS.h:
19      - replace #ifndef ALLOW_EXF  by #ifndef EXCLUDE_FFIELDS_LOAD
20      - make pLoad & sIceLoad always available (but still only used if
21         ATMOSPHERIC_LOADING is #define).
22    o pkg/kpp: replaced _KPP_RL with _RL
23    o bug fixes for vertical diffusivity computations when both KPP and
24        3D diffusivity arrays are used.
25    o pkg/seaice: fix bug in evp solver, while doing that
26      - change (improve?) discretization of stress computations for both
27        cgrid-lsr and evp solver
28      - add a new routine to compute strain rates
29      - the above changes lab_sea results
30      - add no slip conditions for evp solver (off by default), lsr-version
31        may follow
32      - fix exchange for shear at Z-points (does not change lab_sea)
33      - retire SEAICEuseEVP, instead turn on EVP by setting SEAICE_deltaTevp
34        (to force the user to pick a time step since there is not "safe" way
35        of choosing it)
36      - add principal stress diagnostics
37      - rearrange fields for evp a little to avoid having to call a: too many
38        exchanges and b: exchanges for stress trensor components which we do
39        not have.
40      - modify Hibler+Bryan (1987) stress coupling so that it reuses information
41        of evp, complete rewrite for lsr case (latter is does not yet work
42        in all cases)
43    o pkg/kpp: add code to have mixing in shelf ice caverns
44      - add myThid to all kpp routines (long overdue)
45    
46    checkpoint59
47    o pkg/exf:
48      - fix wind-stress location: defined on A-grid (if ALLOW_ATM_WIND &
49        ALLOW_BULKFORMULAE or USE_EXF_INTERPOLATION), otherwise, defined on C-grid
50      - move exf header files from lower_case.h to UPPER_CASE.h ;
51        add missing cvs Header & Name
52      - add adjoint routines and flow dirs for newly used exch_uv_agrid routines
53      - add namelist param. selectStressGridPosition, exf_monFreq
54      - retire many _CLIM routines, and remove data.exf_clim
55        + params moved to data.exf
56        + climsst, climsss now handled by exf_set_gen, i.e.
57          climss?period=0 refers to constant field,
58          climss?period=-12 to monthly forcing
59      - split up namelists in data.exf
60    o pkg/seaice:
61      - remove seaice_exch and seaice_exch_uv
62      - remove superfluous exchange of theta
63      - add myThid to seaice_budget_ocean/ice
64      - add new interface for atmospheric wind forcing (C-grid only)
65        + new routine
66        + two new field (taux, tauy for stress over ice)
67        + removed one global field (DAIRN) for C-grid case only
68    o pkg/thsise
69      - 2nd set of modifs for thsice adjoint in conjunction with exf
70    o enable runtime flag useEXF (useCAL is set to .T. if useEXF=.T.)
71    
72    checkpoint58y_post
73    o Added capability for latitudinal dependence of Bryan and Lewis, 1979
74      vertical diffusivity, similar to that in MOM4; turned on using
75      #define ALLOW_BL79_LAT_VARY in CPP_OPTIONS.h and specified using
76      diffKrBL79*, diffKrBLEQ*, and BL79LatVary in runtime data file.
77    o Added capability for 3D specification of background vertical diffusion
78      coefficient.  This is done by (i) #define ALLOW_3D_DIFFKR
79      in CPP_OPTIONS.h and (ii) specifying file diffKrFile in runtime
80      "data" file that contains the 3D vertical diffusivity coefficients.
81    o ice dynamics (pkg/seaice) with thsice thermodynamics:
82      - add code within pkg thsice to advect & diffuse sea-ice fields
83      similar to (and will replace) what has been added in  seaice_advdiff.F,
84      but: - conserving Mass, Heat & Salt.
85           - better when using non-linear advection scheme (not yet fully tested)
86           - can also be used in atmospheric set-up (for now, only the diffusion).
87    
88    checkpoint58x_post
89    o IO option for global-file compact format:
90      - add options when generating topology (utils/exch2/matlab-topology-generator)
91      - add I/O capability (pkg/mdsio).
92      - adapt utils/matlab/rdmds.m to read this format.
93      for now long-line format not yet supported by pkg/mdsio (& exch2).
94    o shelfice: add a few diagnostics
95    
96    checkpoint58w_post
97    o p-coord. non-hydrostatic using reference profile for w <-> omega conversion:
98      rVel2wUnit & wUnit2rVel are computed from reference profile Tref,Sref
99      (and replace horiVertRatio in NH code).
100      Update output of exp.: tutorial_global_oce_in_p (useNHMTerms !)
101                         and tutorial_plume_on_slope (sensitive to truncation)
102    o seaice: if ALLOW_ATM_WIND is undefined use wind stress
103      directly to drive seaice model (C-grid only)
104    o exf: when input wind-stress (#undef ALLOW_ATM_WIND):
105     - reintroduce computation of wind from stress,
106     - compute tau (in exf_bulkformulae.F) from windstress averaged to
107       mass points to avoid tau = 0
108     - fix serious bug: (1/3) in Fortran is not the same as (1./3.)
109    o rdmnc.m: make it work with "global" files created with gluemnc
110    o rdmnc.m : some improvements in dealing with singleton dimension
111      (tested on all testreport mnc output files).
112    o genmake2: disable pkg/profiles if netcdf test fails.
113    o cpl_aim+ocn exp.: use consistent rhoConstFresh in Atm & Ocn; update output.
114    o move call to cal_readparms up to make calendar parameters/variable available
115      to all packages
116    
117    checkpoint58v_post
118    o change EOS (from POLY3 to JMD95P) in global_ocean.90x45x15 to get
119      useDynP_inEos_Zc tested.
120    o pkg/exf: changes to properly interpolate/mask/scale initial fields
121    o utils/matlab/cs_grid/read_cs: routines to speed up reading of CS510 fields
122      and portions thereof.  See read_cs.txt for description and examples.
123    o utils/matlab/cs_grid/bk_line: to compute transport through passages,
124      add a script (grt_circ_bkl.m) to generate broken-line between 2 points,
125      following the great-circle arc between those 2 points.
126    o trap un-initialized variable with pathscale compiler on weddell.mit.edu
127      (thanks to Constantinos): fix few problems and get (almost) all exp to pass.
128    o 2nd-Order Moment Advection Scheme (Prather, 1986): first check-in
129     - enable by setting #define GAD_ALLOW_SOM_ADVECT (in GAD_OPTIONS.h)
130     - used without limiter (AdvScheme=80) or with Prather limiter (AdvScheme=81)
131     - still needs work (not working with some options ; efficiency to improve)
132       and serious testing.
133     - use this scheme for temperature & salinity in 2 advection test exp.:
134       advect_xy & advect_xz, respectively.
135    
136  checkpoint58u_post  checkpoint58u_post
137  o new test-exp: fizhi-cs-32x32x40 (40 levels) to replace the 10 levels.  o new test-exp: fizhi-cs-32x32x40 (40 levels) to replace the 10 levels.
138  o move call to INI_FORCING from PACKAGES_INIT_VARIABLES to INITIALISE_VARIA.  o move call to INI_FORCING from PACKAGES_INIT_VARIABLES to INITIALISE_VARIA.

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