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revision 1.763 by mlosch, Tue Jan 9 13:36:19 2007 UTC revision 1.807 by mlosch, Thu May 3 14:51:33 2007 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/kpp
8     - move computation of surface related input fields to KPP into a new
9       subroutine kpp_forcing_surf.F
10    o pkg/seaice
11     - check for inconsistent evp parameter/cpp-flag combination
12     - remove leftover errIO flat for obsolete name list error handling
13    
14    checkpoint59a
15    o pkg/seaice: some parameter clarifications and a little bit of clean up
16    o pkg/thsice: rename run-time parameters:
17       himin       -> hIceMin
18       himin0      -> hThinIce
19       hihig       -> hThickIce
20       i0          -> i0swFrac
21       transCoef   -> bMeltCoef
22       frac_energy -> fracMelting
23      add new parameters: hNewIceMax, fracFreezing, dhSnowLin
24       with default values (for now) that do not change the results.
25      remove old version of thsice vars advection in pkg/seaice.
26    o in FFIELDS.h:
27      - replace #ifndef ALLOW_EXF  by #ifndef EXCLUDE_FFIELDS_LOAD
28      - make pLoad & sIceLoad always available (but still only used if
29         ATMOSPHERIC_LOADING is #define).
30    o pkg/kpp: replaced _KPP_RL with _RL
31    o bug fixes for vertical diffusivity computations when both KPP and
32        3D diffusivity arrays are used.
33    o pkg/seaice: fix bug in evp solver, while doing that
34      - change (improve?) discretization of stress computations for both
35        cgrid-lsr and evp solver
36      - add a new routine to compute strain rates
37      - the above changes lab_sea results
38      - add no slip conditions for evp solver (off by default), lsr-version
39        may follow
40      - fix exchange for shear at Z-points (does not change lab_sea)
41      - retire SEAICEuseEVP, instead turn on EVP by setting SEAICE_deltaTevp
42        (to force the user to pick a time step since there is not "safe" way
43        of choosing it)
44      - add principal stress diagnostics
45      - rearrange fields for evp a little to avoid having to call a: too many
46        exchanges and b: exchanges for stress trensor components which we do
47        not have.
48      - modify Hibler+Bryan (1987) stress coupling so that it reuses information
49        of evp, complete rewrite for lsr case (latter is does not yet work
50        in all cases)
51    o pkg/kpp: add code to have mixing in shelf ice caverns
52      - add myThid to all kpp routines (long overdue)
53    
54    checkpoint59
55    o pkg/exf:
56      - fix wind-stress location: defined on A-grid (if ALLOW_ATM_WIND &
57        ALLOW_BULKFORMULAE or USE_EXF_INTERPOLATION), otherwise, defined on C-grid
58      - move exf header files from lower_case.h to UPPER_CASE.h ;
59        add missing cvs Header & Name
60      - add adjoint routines and flow dirs for newly used exch_uv_agrid routines
61      - add namelist param. selectStressGridPosition, exf_monFreq
62      - retire many _CLIM routines, and remove data.exf_clim
63        + params moved to data.exf
64        + climsst, climsss now handled by exf_set_gen, i.e.
65          climss?period=0 refers to constant field,
66          climss?period=-12 to monthly forcing
67      - split up namelists in data.exf
68    o pkg/seaice:
69      - remove seaice_exch and seaice_exch_uv
70      - remove superfluous exchange of theta
71      - add myThid to seaice_budget_ocean/ice
72      - add new interface for atmospheric wind forcing (C-grid only)
73        + new routine
74        + two new field (taux, tauy for stress over ice)
75        + removed one global field (DAIRN) for C-grid case only
76    o pkg/thsise
77      - 2nd set of modifs for thsice adjoint in conjunction with exf
78    o enable runtime flag useEXF (useCAL is set to .T. if useEXF=.T.)
79    
80    checkpoint58y_post
81    o Added capability for latitudinal dependence of Bryan and Lewis, 1979
82      vertical diffusivity, similar to that in MOM4; turned on using
83      #define ALLOW_BL79_LAT_VARY in CPP_OPTIONS.h and specified using
84      diffKrBL79*, diffKrBLEQ*, and BL79LatVary in runtime data file.
85    o Added capability for 3D specification of background vertical diffusion
86      coefficient.  This is done by (i) #define ALLOW_3D_DIFFKR
87      in CPP_OPTIONS.h and (ii) specifying file diffKrFile in runtime
88      "data" file that contains the 3D vertical diffusivity coefficients.
89    o ice dynamics (pkg/seaice) with thsice thermodynamics:
90      - add code within pkg thsice to advect & diffuse sea-ice fields
91      similar to (and will replace) what has been added in  seaice_advdiff.F,
92      but: - conserving Mass, Heat & Salt.
93           - better when using non-linear advection scheme (not yet fully tested)
94           - can also be used in atmospheric set-up (for now, only the diffusion).
95    
96    checkpoint58x_post
97    o IO option for global-file compact format:
98      - add options when generating topology (utils/exch2/matlab-topology-generator)
99      - add I/O capability (pkg/mdsio).
100      - adapt utils/matlab/rdmds.m to read this format.
101      for now long-line format not yet supported by pkg/mdsio (& exch2).
102    o shelfice: add a few diagnostics
103    
104    checkpoint58w_post
105    o p-coord. non-hydrostatic using reference profile for w <-> omega conversion:
106      rVel2wUnit & wUnit2rVel are computed from reference profile Tref,Sref
107      (and replace horiVertRatio in NH code).
108      Update output of exp.: tutorial_global_oce_in_p (useNHMTerms !)
109                         and tutorial_plume_on_slope (sensitive to truncation)
110    o seaice: if ALLOW_ATM_WIND is undefined use wind stress
111      directly to drive seaice model (C-grid only)
112    o exf: when input wind-stress (#undef ALLOW_ATM_WIND):
113     - reintroduce computation of wind from stress,
114     - compute tau (in exf_bulkformulae.F) from windstress averaged to
115       mass points to avoid tau = 0
116     - fix serious bug: (1/3) in Fortran is not the same as (1./3.)
117    o rdmnc.m: make it work with "global" files created with gluemnc
118    o rdmnc.m : some improvements in dealing with singleton dimension
119      (tested on all testreport mnc output files).
120    o genmake2: disable pkg/profiles if netcdf test fails.
121    o cpl_aim+ocn exp.: use consistent rhoConstFresh in Atm & Ocn; update output.
122    o move call to cal_readparms up to make calendar parameters/variable available
123      to all packages
124    
125    checkpoint58v_post
126    o change EOS (from POLY3 to JMD95P) in global_ocean.90x45x15 to get
127      useDynP_inEos_Zc tested.
128    o pkg/exf: changes to properly interpolate/mask/scale initial fields
129    o utils/matlab/cs_grid/read_cs: routines to speed up reading of CS510 fields
130      and portions thereof.  See read_cs.txt for description and examples.
131    o utils/matlab/cs_grid/bk_line: to compute transport through passages,
132      add a script (grt_circ_bkl.m) to generate broken-line between 2 points,
133      following the great-circle arc between those 2 points.
134    o trap un-initialized variable with pathscale compiler on weddell.mit.edu
135      (thanks to Constantinos): fix few problems and get (almost) all exp to pass.
136    o 2nd-Order Moment Advection Scheme (Prather, 1986): first check-in
137     - enable by setting #define GAD_ALLOW_SOM_ADVECT (in GAD_OPTIONS.h)
138     - used without limiter (AdvScheme=80) or with Prather limiter (AdvScheme=81)
139     - still needs work (not working with some options ; efficiency to improve)
140       and serious testing.
141     - use this scheme for temperature & salinity in 2 advection test exp.:
142       advect_xy & advect_xz, respectively.
143    
144    checkpoint58u_post
145    o new test-exp: fizhi-cs-32x32x40 (40 levels) to replace the 10 levels.
146    o move call to INI_FORCING from PACKAGES_INIT_VARIABLES to INITIALISE_VARIA.
147    o testreport: add option "-skipdir" to skip some test.
148    o exf: when input wind-stress (#undef ALLOW_ATM_WIND), by-pass turbulent
149      momentum calculation.
150    o gad_advection: fix vertAdvecScheme (if different from advectionScheme)
151    o some cleaning: usePickupBeforeC35 no longer supported ; remove this option.
152      remove checkpoint.F and the_correction_step.F (no longer used);
153      do the k loop inside CYCLE_TRACER (supposed to be more efficient).
154    o add option (linFSConserveTr) to correct for tracer source/sink due to
155      Linear Free surface
156  o pkg/seaice: fix a bug in the flooding algorithm: turn off the snow machine  o pkg/seaice: fix a bug in the flooding algorithm: turn off the snow machine
157  o pkg/thsice: fix reading mnc-pickups  o pkg/thsice: fix reading mnc-pickups
158    

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