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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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next patch: |
checkpoint45a_post |
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o bug fix in packages_readparms (missing ALLOW_CALENDAR) |
o compute Rho over the whole domain (extend iMin,jMin indices) |
| 8 |
o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM |
o specific exchange for X-slice domain (case Ny=1) |
| 9 |
o Adjoint-related bug fixes in kpp: |
o argument futureIter of S/R obcs_calc missing in exp4 & internal_wave /code |
| 10 |
- kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix |
o solve_for_pressure : set cg2d_x to zero where OBCS are applied |
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- kpp_routines: store of Rib avoids partial recomputation bug of TAF. |
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o added Eliassen-Palm flux hooks (dynamics,ini_fields) |
checkpoint44h_post = checkpoint45 |
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o removed unused TAF keys iikey, idkey (dynamics,thermodynamics) |
o Fix to restore differentiability: |
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o flow directives: |
place at which packages_init_variables is called in |
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- new for S/R do_the_model_io |
initialise_varia is crucial for reverse control flow. |
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- enhanced for S/R checkpoint |
o modifications in GMRedi to enable stable adjoint |
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o added E-P fluxes to gradient check package |
(corresponding modif's in thermodynamics, dynamics) |
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o added missing hook for sponge layer code in external_forcing |
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release1_p4 |
o modified test cost functions |
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o Removed f90 comments ("!") |
o storing in gad_advection (plus removal of write(0,*)! |
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o Modified initialisations to enable exf package for MITgcm |
o missing headers TR1.h added in convective_adjustment routines |
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(without invoking ECCO_PACKAGE). |
o errorMessageUnit set non-equal zero in eeboot |
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o modifications to gradient check package (Martin Losch) |
(conflict on some platforms, e.g. IBM SP3) |
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- enable centered differences |
o modified carbon verif. |
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- modified format of standard output |
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checkpoint44h_pre |
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release1_p3 |
o vertical grid option: allow to put the Interface at the middle between |
| 28 |
o added tangent linear setup to verification/carbon/ |
2 cell-centers ; replace delZ in pkg/kpp by drF. |
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o added adjoint sensitivity setup to verification/global_ocean... |
o GM Advective form: Tracers are advected using the residual transport (= |
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o moved packages_init_variables before convective_adjustment |
Euler+GM-bolus); set param GM_AdvSeparate=T to return to previous form. |
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o output of verif. which use GMRedi brought up-to-date with |
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MAIN trunk (those were re-created after changes in GMRedi) |
checkpoint44g_post |
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o included CPP option SINGLE_LAYER_MODE |
o fix surface correction term in multiDimAdvection (affects plume_on_slope |
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to configure barotropic setup (Martin Losch). |
results) ; ifdef missing in thermodynamics.F |
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o Removed auxiliary variable in impldiff |
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(caused numerical differences with MAIN trunk routine). |
checkpoint44f_pre,checkpoint44f_post |
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o Introduced CPP option ALLOW_AUTODIFF_MONITOR to |
o added PTRACERS package |
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disable adcommon.h/g_common.h by default. |
This allows an arbitrary number of passive tracers to be integrated |
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o Cleaned exchange calls in cg2d. |
forward simultaneously with the dynamicaly model. |
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+ Implemented so far: |
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release1_p2 |
- basic forward algorithm (time-stepping, advection, diffusion, convection) |
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o fixed array boundary problem for adjoint |
- I/O and checkpointing |
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(related to partial recomputation within subroutine |
- GM/Redi *but* using the GM/Redi coefficient of Salt |
| 44 |
related to dynamics -> calc_viscosity -> mom_... |
+ Not implemented so far: |
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o fixed recomputation in thermodynamics |
- KPP |
| 46 |
o prepare (but not complete) recomputation problem in impldiff |
- OBCS |
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o fixed problem for adjoint of global_max |
+ No specific example supplied (yet) but global_ocean.90x40x15 has the |
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o switched off sponge layer code in external_forcing |
necessary data.ptracer file. Simply use -enable=ptracers and uncomment |
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line in data.pkg. |
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release1_p1 |
+ This package is disabled by default since it increases storage. |
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o merged necessary patches: |
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- AD-related changes for GMRedi |
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- fixes i KPP (delZ -> drF) |
o testscript: added -cleanup option |
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- hook to OBCS songe layer code in external_forcing |
o Shap_filt: a) new shap_filt S/R to use no-slip BC with S2 filter |
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- errorMessageUnit non-zero in eeboot.F |
b) enable to filter 2D fields. |
| 56 |
- modified test cost function and carbon verif. |
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checkpoint44e_pre,post |
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release1_chkpt44d_post = chkpt44d_post |
o re-wrote convective adjustment to use pre-calculated weights |
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Affects: model/src/convective_adjustment.F, convective_adjustment_ini.F |
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Adds: model/src/convective_weights.F, convectively_mixtracer.F |
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Original calls to convect() still in place. |
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chkpt44d_pre,post |
chkpt44d_pre,post |
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o added missing EXCLUDE_MONITOR flags |
o added missing EXCLUDE_MONITOR flags |
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plus resetting for case SunOS |
plus resetting for case SunOS |
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o added timer_stats.c routine for IBM SP3 |
o added timer_stats.c routine for IBM SP3 |
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o removed variables in dynamics |
o removed variables in dynamics |
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!!! I forgot to create tag chkpt44d_pre !!! |
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!!! But chkpt44d_pre = chkpt44c_post !!! |
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o real fresh water flux implemented with non-linear free-surface. |
o real fresh water flux implemented with non-linear free-surface. |
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