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revision 1.53.2.13 by heimbach, Thu Nov 7 17:34:09 2002 UTC revision 1.66 by jmc, Tue Mar 5 15:36:06 2002 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6  release1_p7  checkpoint44g_post
7  o GAD:  o fix surface correction term in multiDimAdvection (affects plume_on_slope
8    - generated new common blocks to account for call of    results) ; ifdef missing in thermodynamics.F
9      same gad routines with differing traceridentities  
10      (needed to modify tracerIdentity indices in GAD.h)  checkpoint44f_pre,checkpoint44f_post
11    - generated separate common blocks for case useCubedSphereExchange  o added PTRACERS package
12      (Department of Futurology)    This allows an arbitrary number of passive tracers to be integrated
13    - parameter lists to gmredi_?transport: added tracerIdentity    forward simultaneously with the dynamicaly model.
14    - added new key indices to tamc.h    + Implemented so far:
15  o external_fields_load:      - basic forward algorithm (time-stepping, advection, diffusion, convection)
16    - added this routine to TAF list      - I/O and checkpointing
17    - needed to make some common blocks global and additional storing      - GM/Redi  *but*  using the GM/Redi coefficient of Salt
18      along the same lines as exf package (checkpoint_lev?_directives.h)    + Not implemented so far:
19  o exf:      - KPP
20    updated external forcing package      - OBCS
21    - bug fixes carried over from ecco-branch    + No specific example supplied (yet) but global_ocean.90x40x15 has the
22      (missing OBCS_OPTIONS.h in two routines)      necessary data.ptracer file. Simply use -enable=ptracers and uncomment
23    - enable easy to use "no forcing".      line in data.pkg.
24    - added exf I/O for atmospheric loading    + This package is disabled by default since it increases storage.
25    - added exf I/O for runoff data  
26    - transfered scaling between exf <-> MITgcm to exf namelist  
27  o Adding new verification experiment global_with_exf.  o testscript: added -cleanup option
28    This verification experiment is almost identical to the  o Shap_filt: a) new shap_filt S/R to use no-slip BC with S2 filter
29    global_ocean.90x40x15 experiment, except that it uses               b) enable to filter 2D fields.
30    the exf (and cal) package instead of the  
31    external_fields_load routine (cf README file).  checkpoint44e_pre,post
32    o re-wrote convective adjustment to use pre-calculated weights
33  release1_p6    Affects: model/src/convective_adjustment.F, convective_adjustment_ini.F
34  o fixed the verification/global_ocean.90x40x15 experiment:    Adds:    model/src/convective_weights.F, convectively_mixtracer.F
35   - new bathymetry (the world according to A., JMC, and M.)    Original calls to convect() still in place.
  - new initial fields and forcing fields (*.bin files)  
  - new POLY3.COEFFS (for the next release one should switch to a full  
    equation of state)  
  - fixed several errors and redundancies in the data file  
  - experiment uses looped cells  
  - added matlab directory with diagnostic scripts for plotting of output  
   
 release1_p5  
 o import recent fix from MAIN branch:  
   - use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S  
   - change phiMin in exp1 (to agree with documentation)  
  from checkpoint45 to checkpoint45a_post:  
   - specific exchange for X-slice domain (case Ny=1)  
   - argument futureIter of S/R obcs_calc missing in  
     exp4 & internal_wave /code  
   - solve_for_pressure : set cg2d_x to zero where OBCS are applied  
  from checkpoint44f_post to checkpoint44g_post:  
   - fix surface correction term in multiDimAdvection  
     (affects plume_on_slope results  
 o bug fix in packages_readparms (missing ALLOW_CALENDAR)  
 o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM  
 o Adjoint-related bug fixes in kpp:  
   - kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix  
   - kpp_routines: store of Rib avoids partial recomputation bug of TAF.  
 o added Eliassen-Palm flux hooks (dynamics,ini_fields)  
 o removed unused TAF keys iikey, idkey (dynamics,thermodynamics)  
 o flow directives:  
   - new for S/R do_the_model_io  
   - enhanced for S/R checkpoint  
 o added Eliassen Palm flux controls to gradient check package  
 o new ctrl package  
   - adopted from ECCO environment to enable optimization  
   - added Eliassen Palm fluxes to controls  
   - adjusted global_ocean.90x40x15/ and carbon/ accordingly  
   
 release1_p4  
 o Removed f90 comments ("!")  
 o Modified initialisations to enable exf package for MITgcm  
   (without invoking ECCO_PACKAGE).  
 o modifications to gradient check package (Martin Losch)  
   - enable centered differences  
   - modified format of standard output  
   
 release1_p3  
 o added tangent linear setup to verification/carbon/  
 o added adjoint sensitivity setup to verification/global_ocean...  
 o moved packages_init_variables before convective_adjustment  
 o output of verif. which use GMRedi brought up-to-date with  
   MAIN trunk (those were re-created after changes in GMRedi)  
 o included CPP option SINGLE_LAYER_MODE  
   to configure barotropic setup (Martin Losch).  
 o Removed auxiliary variable in impldiff  
   (caused numerical differences with MAIN trunk routine).  
 o Introduced CPP option ALLOW_AUTODIFF_MONITOR to  
   disable adcommon.h/g_common.h by default.  
 o Cleaned exchange calls in cg2d.  
   
 release1_p2  
 o fixed array boundary problem for adjoint  
   (related to partial recomputation within subroutine  
   related to dynamics -> calc_viscosity -> mom_...  
 o fixed recomputation in thermodynamics  
 o prepare (but not complete) recomputation problem in impldiff  
 o fixed problem for adjoint of global_max  
 o switched off sponge layer code in external_forcing  
   
 release1_p1  
 o merged necessary patches:  
   - AD-related changes for GMRedi  
   - fixes i KPP (delZ -> drF)  
   - hook to OBCS songe layer code in external_forcing  
   - errorMessageUnit non-zero in eeboot.F  
   - modified test cost function and carbon verif.  
   
 release1_chkpt44d_post = chkpt44d_post  
36    
37  chkpt44d_pre,post  chkpt44d_pre,post
38  o added missing EXCLUDE_MONITOR flags  o added missing EXCLUDE_MONITOR flags
# Line 118  o in genmake added variable MAKEDEPEND Line 43  o in genmake added variable MAKEDEPEND
43    plus resetting for case SunOS    plus resetting for case SunOS
44  o added timer_stats.c routine for IBM SP3  o added timer_stats.c routine for IBM SP3
45  o removed variables in dynamics  o removed variables in dynamics
46    !!! I forgot to create tag chkpt44d_pre !!!
47    !!! But chkpt44d_pre = chkpt44c_post    !!!
48    
49  o real fresh water flux implemented with non-linear free-surface.  o real fresh water flux implemented with non-linear free-surface.
50    

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