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revision 1.594 by heimbach, Thu Dec 22 16:01:45 2005 UTC revision 1.637 by mlosch, Tue Mar 21 13:00:33 2006 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o seaice: add an EVP solver following Hunke and Dukowicz (1997) and the
8      documentation of CICE. Turn on by defining SEAICE_ALLOW_EVP in
9      SEAICE_OPTIONS.h and SEAICEuseEVP=.true. in data.seaice. Works only
10      with SEAICE_CGRID defined.
11    o move calendarDumps from "data" to "data.cal" and clean-up the code
12      with a simple call to pkg/cal S/R: CAL_TIME2WRITE
13    o add useEXF & useCAL flags (for now, set in hard-coded way)
14    o add S/R to compute NH-metrics terms & Coriolis f' in vertical momentum
15      (were missing in NH mode, and wrong in quasihydrostatic mode).
16      waiting for Chris updated version of calc_gw to add those CALLs.
17    o fix bug in quasihydrostatic S/R ;
18      add a test for this option: global_ocean.90x40x15.qshyd
19    o new S/R "SET_PARMS": set parameters that might depend on the use of some pkgs.
20      (called from INITIALISE_FIXED, after INI_PARMS & PACKAGES_READPARAMS)
21    o add on/off flag useOffLine for package OFFLINE
22    o seaice:
23      - modify advection so that it works also on the C-grid
24      - extend loop ranges in seaice_lsr and seaice_dynsolver; fixes
25        problem in multi-tile runs with C-grid
26      - add flags for clipping ice velocities and/or masking solver forcing
27      - fix drag (ocean on ice) formulation and a bug that caused noise in the
28        C-grid solver
29      - added a few comments to seaice_diffusion.F
30      - separate C-grid and B-grid versions more cleanly (UVM and seaiceMaskU/V
31        are now exclusive)
32      - add a new ocean-ice stress coupling method (Hibler and Bryan, 1987) which
33        required re-ordering the code a little:
34       + make DAIRN global variable (defined in SEAICE)
35       + move computation of the viscosities eta and zeta into a new separate
36         routine (because I need to recompute them in seaice_ocean_stress.F)
37    
38    checkpoint58b_post
39    o AIM+thSIce: fix sign of Short-Wave through the Ice ;
40      update output.txt of exp. aim.5l_cs.thSI
41    o various mnc cleanups and improvements:
42      + shrink lookup tables by factor of ~4
43      + better error reporting when running out of lookup space
44      + able to handle longer path/file names (up to 500 chars)
45    o adjoint:
46      - Another overhaul of store dirs. for NLFS to eliminate  "hidden" recomputations.
47      - TBD: "hidden" mom_vecinv recomp. in dynamics
48    o change forcing_In_AB to affects both T,S forcing and Momentum forcing
49     (allow to differentiate between forcing components using new integer flags:
50      momForcingOutAB=1/0 & tracForcingOutAB=1/0)
51     and add new flag to put Dissipation tendency out of Adams-Bashforth.
52    o ecco
53      - enable trend removal from SSH anomaly obs.
54    o adjoint
55      - a fix for PmEpR when #undef EXACT_CONSERV
56      - fix of "hidden" recomp. in thermodynamics (no TAF warnings)
57      - try to fix "hidden" recomp. in forward_step for NLFS
58        (NLFS seems broken sometimes after I checked it in)
59    o seaice:
60     - add c-grid version of the dynamic solver:
61       + three new routines that are the c-grid substitute lsr, dynsolver
62         and ostres
63       + put a few fields that were local to dynsolver into global common
64         blocks, so that I can move the computation of stresses etc into
65         seaice_lsr (saves coding but may break the adjoint).
66     - replace more hardwired parameters by runtime parameters
67     - add ice masks that mask the rhs of the implicit solvers where there
68       is no ice (commented out in seaice_dynsolver, because i am not sure
69       if this works properly), eventually this should replace the clipping
70       of ice velocities in seaice_dynsolver to +/-40cm/s.
71    o remove the BUILD_INFO.h include from CPP_EEOPTIONS.h and explicitly
72      include it only where its needed
73    o move balancing of fluxes before the call of external_forcing_surf
74    o seaice:
75      - correct units of turning angles (now they are really in degrees)
76      - move computation of GWATX/Y out of main routine into dynsolver
77      - initialize GWATX/Y in seaice_init
78    o Apply mask on Fresh-Water flux (needed for SSH forcing).
79      update output.txt of exp. global_ocean_ebm & cpl_aim+ocn (affects cg2d residual)
80    o seaice: add runtime flags for turning angles (default to zero)
81    o Adding runtime parameter to exf/, ctrl/, to remove on-the-fly global mean
82      and trend from exf forcing and ctrl control adjustments
83    o fix variable aliasing in gad_calc_rhs that cannot be handled by TAF
84      (since checkpoint57x_post)
85    o change the default rotation period to 86164.s = the Earth rotation
86    o 1rst implementation of Implicit IGW using the 3-D solver (use3Dsolver=T)
87      and based on a reference stratification. Tested within hs94.cs-32x32x5.
88    o seaice advection: add code for choosing between the default (2nd order
89      central differences) and multiDim advection schemes provided by
90      pkg/generic_advdiff
91    o seaice:
92      - removed all references to SEAICE_GRID.h fields from
93        dynsolver, advect, diffus, lsr, without changing the results of lab_sea
94        (cubed-sphere configuration will change a little)
95      - grid computations in seaice_init are obsolete now.
96      - cleaned up code a little so that is easier to read (hopefully).
97      - added new (better?) discretizations of default advection and diffusion
98        (turn on with SEAICEuseFluxForm)
99      - replace 1 in 3d global fields by kSurface in growth.F
100      
101    checkpoint58a_post
102    o seaice:
103      - bug fix in advect.F
104    o shelfice:
105      - separate shelfice load anomaly from pload (breaks with time
106        dependent forcing), => introduce constant field shelficeLoadAnomaly.
107        Its default is 0., but it may be computed more cleverly from (unknown)
108        t- and s-profiles (tRef, sRef) and actual EOS. For now this has to be
109        done offline. A good approximation of the pressure load anomaly is
110        necessary to avoid large initial adjustment processes underneath
111        deep-reaching shelfice.
112      - small fix in ISOMIP shelfice_thermodynamics
113      - add more sophisticated thermodynamics of Hellmer (1989), this is
114        now the default
115      - give a few constants more intuitive names
116    o add code to balance EmPmP and Qnet at the end of do_ocean_physics. Useful
117      if bulk formulae are used in long integration (especially EmPmR). Turn
118      on with balanceEmPmR = .true. or balanceQnet = .true. in data, PARM01
119      if balancePrintMean, the imbalance that is substracted is printed to
120      STDOUT.
121    o fix bug (typo) in obcs_apply_eta.F
122    o add a new package shelfice which enables us to model the circulation
123      underneath shelf-ice with draughts of hundreds of meters.
124     - works
125     - to do: + include improved thermodynamics
126              + check whether kSurfC (from model/inc/SURFACE.h) can be used
127                instead of new field kTopC
128              + can we use topoFile, Ro_surf and existing code in ini_depth.F
129                instead of new field R_shelfIce and new code in ini_depth.F
130                and ini_mask_etc.F?
131              + adjust vertical mixing schemes?
132    o seaice pkg:
133     - add a cpp-flag to include a simple formula for a salinity dependent
134       freezing point of sea water at the surface
135     - change the contents of SEAICE_TEST_ICE_STRESS_1 so that zonal and
136       meridional stresses are now different (and hopefully correct)
137    o AIM pkg: change threshold on large-scale condensation to conserve Heat.
138       update results of aim.5l_LatLon test ; fix title & units of AIM diagnostics
139       and  change 3 diagnostics names (OSR,OSRCLR,KM -> TSR,TSRCLR,DRAG)
140    o pkg/diagnostics: add options and parameters for regional-statistics
141       diagnostics ; define regions by reading a region-mask from a file
142       (might add other options later)
143    o pkg/bulk_force:
144     - add option and parameters to use AIM surface-flux formulae.
145     - Change loading part: S/R BULKF_FIELDS_LOAD only take care of bulkf_fields ;
146       others forcing fields (defined in PARM05, parameter file "data") are loaded
147       from S/R EXTERNAL_FIELDS_LOAD, as usually (with useBulkforce = T or F).
148     - initialise all bulkf_fields in bulkf_init.F ; do in-lining of exf_bulkcdn.F
149     - use the right EXCH call for uwind,vwind (to work on CS-grid).
150     - re-arrange header files (move parameters from BULKF.h to BULKF_PARAMS.h)
151       and parameters (note: calcWindStress replaces .NOT.readwindstress).
152     - cleaner interface with pkg/thSIce (new S/R THSICE_GET_PRECIP).
153    
154    checkpoint58
155    o add "--embed-source" option to genmake2 which, when the supporting
156      tools can be compiled (as determined by genmake2) will turn on the
157      embed_files package which then embeds the entire MITgcm source code
158      (*.[fFhc] + Makefile) used for the build within the executable
159      - requested by CNH but off by default
160      - adds a paltry <9MB to the mitgcmuv executable in most cases
161      - only writes the output when useEMBEDSRC in eedata is true
162    o clean up 3-dim. relaxation codes:
163      * Fix I/O inconsistency in pkg/rbcs: replace precFloat32 by readBinaryPrec
164      * Remove 3-dim. relaxation code from pkg/exf (now use only pkg/rbcs)
165      * Thanks to Tom Haine for testing!
166    
167    checkpoint57z_post
168  o make CG3D solver compatible with Free-surface at k > 1 (p-coordinate):  o make CG3D solver compatible with Free-surface at k > 1 (p-coordinate):
169    affects output (@ truncation level) of exp. plume_on_slope ; updated.    affects output (@ truncation level) of exp. plume_on_slope ; updated.
170  o fix the pickup behavior for obcs in combination with ptracers  o fix the pickup behavior for obcs in combination with ptracers
# Line 26  o completing 3-dim. relaxation code: add Line 187  o completing 3-dim. relaxation code: add
187        1) Use a constant-in-time 3-dim. field        1) Use a constant-in-time 3-dim. field
188        2) Provide 12 3-dim. fields corresponding to Jan., ... , Dec.        2) Provide 12 3-dim. fields corresponding to Jan., ... , Dec.
189        3) Real-time relax. to time-evolving prescribed field        3) Real-time relax. to time-evolving prescribed field
190  o Adding Laplacian-type smoothness constraint on forcing controls  o Adding Laplacian-type smoothness constraint on
191    * enable at compile-time via ALLOW_SMOOTH_BOUNDARY_CTRL_COST    initial and boundary (forcing) controls (ic, bc)
192    * enable at run-time via mult_smooth = 1    * enable at compile-time via
193        ALLOW_SMOOTH_IC_COST_CONTRIBUTION, ALLOW_SMOOTH_BC_COST_CONTRIBUTION
194      * enable at run-time via mult_smooth_ic = 1, mult_smooth_bc = 1
195    * Absolute scale somewhat unclear so far    * Absolute scale somewhat unclear so far
196    * no area weighting was included since no other cost term does so far    * no area weighting was included since no other cost term does so far
197    

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