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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o CS-grid: fix divergence contribution to Leith viscosity. Affects (@ |
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truncation level) 4/5 MLAdjust test results (11&12 digits match). |
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| 10 |
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checkpoint57t_post |
| 11 |
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o test biharmonic viscosity + no-slip with exp: global_ocean.cs32x15.viscA4 |
| 12 |
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o finish adding brackets (coriolis S/R, vecinv) in multi-terms sum to get |
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same truncation, independent of the face number: affects affects several |
| 14 |
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test. exp.: Update global_ocean.cs32x15 (+.thsice) & MLAdjust (all 5). |
| 15 |
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o fix bug in mom_v_sidedrag (biharmonic viscosity was counted 2 times); |
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note that biharmonic viscosity + no-slip was not tested in any experiment. |
| 17 |
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o fix bug in non-linear free-surf side-drag ; generate new output for |
| 18 |
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global_ocean.cs32x15(+.thsice) & global_ocean_pressure. |
| 19 |
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o make mnc honor the writeBinaryPrec flag for most kinds of output |
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o eesupp: split EEPARAMS into EESIZE/EEPARAMS and add a vector global sum |
| 21 |
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o minor change in averaging W (mom_vi_?_vertshear.F) that affects truncation |
| 22 |
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error; update output from global_ocean.cs32x15(+.thsice) & MLAdjust (all 5). |
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o add brackets in multi-terms sum to get same truncation, independent of |
| 24 |
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the face number (manage to get exactly same value of gU,gV at the cs-edge) |
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affects several test. exp. Update global_ocean.cs32x15 (+.thsice). |
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o Clean, new version of mom_calc_visc. Adds a new feature, viscAhRemax |
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and viscA4Remax, which allow one to limit the minimum viscosity by specifying |
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a maximum grid-scale Reynolds number. Also, changes all length calculations |
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in the case of grid anisotropy to geometric mean of dx**2 and dy**2. |
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Suggested values of viscosity parameters found in mom_calc_visc. |
| 31 |
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Many new viscosity diagnostics available. |
| 32 |
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| 33 |
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checkpoint57s_post |
| 34 |
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o Add clearing-house for viscosity calculations, mom_calc_visc and |
| 35 |
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correct numerous bugs in LeithD and Smagorinsky discretizations. |
| 36 |
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mom_calc_visc now allows for Smagorinsky, Leith and LeithD to be |
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used simultaneously, and to be used in mom_vecinv and mom_fluxform. |
| 38 |
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Mom_vecinv can be used with standard viscous calculation (mom_vi_hdissip.F) |
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and with Strain-Tension viscous term calculation (mom_hdissip.F). |
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The Strain-Tension form is now called with useStrainTensonVisc=.true. |
| 41 |
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ViscAhStrain and viscAhTension are now retired. |
| 42 |
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o diagnostics "VISCAHD" & "VISCA4D" replace "VISCAH" & "VISCA4". |
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o In response to JMC's bug report, genmake2 now ignores any soft-links |
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that it finds in the *current* directory when searching for files. |
| 45 |
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Soft-links found in any other source directories will still work as |
| 46 |
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they did before. |
| 47 |
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o add HAVE_SETRLSTK define and useSETRLSTK flag (eedata) which calls |
| 48 |
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a C routine to unlimit the stack size |
| 49 |
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o mnc-ify pkg/aim snapshot vars |
| 50 |
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o mnc-ify pkg/land as requested by Daniel |
| 51 |
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o various changes to mnc including: |
| 52 |
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- all files use the new "BASENAME[[.ITER].{t|f}NUM].nc" format |
| 53 |
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- output can now be grouped so that all files within a group |
| 54 |
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change the ITER portion of their names in lock-step together |
| 55 |
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- can now read ("global") PER-FACE (in addition to PER-TILE) files |
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and works with both EXCH1 and EXCH2 (but needs more testing) |
| 57 |
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- writing works for all verification test cases w/ g77 on Linux |
| 58 |
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| 59 |
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checkpoint57r_post |
| 60 |
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o make MNC variable initialization happen earlier |
| 61 |
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o add diagnostics for (almost) each term of the momentum Eq. |
| 62 |
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o remove SST,SSS,UVEL_k2,VVEL_k2 diagnostics. |
| 63 |
o move pkg timeave out of pkg-groups "oceanic" & "atmospheric" (pkg/pkg_groups) |
o move pkg timeave out of pkg-groups "oceanic" & "atmospheric" (pkg/pkg_groups) |
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o remove MINIMAL_TAVE_OUTPUT option ; |
o remove MINIMAL_TAVE_OUTPUT option ; |
| 65 |
add "dumpInitAndLast" to replace "nodumps" (and MINIMAL_TAVE_OUTPUT). |
add "dumpInitAndLast" to replace "nodumps" (and MINIMAL_TAVE_OUTPUT). |
| 66 |
o move some basic S/R (used elsewhere in the code) from pkg/mdsio to eesupp/src |
o move some basic S/R (used elsewhere in the code) from pkg/mdsio to eesupp/src |
| 67 |
allows to compile without pkg/mdsio (& test successfully hs94.1x64x5) |
allows to compile without pkg/mdsio (& test successfully hs94.1x64x5) |
| 68 |
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o add MNC output for adjoint of EXF (adexf), SEAICE (adseaice) |
| 69 |
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o add time-dependent SST, SSS control |
| 70 |
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o cost terms in ecco/ modularized (new cost_generic.F) |
| 71 |
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o cost_averages routines are modularized (new cost_averagesgeneric.F) |
| 72 |
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o new infrastructure for seaice model vs. obs misfits in seaice/ |
| 73 |
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* driver from the_main_loop.F is seaice_cost_driver.F |
| 74 |
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* first term is AREA vs. SMR observation misfit (ALLOW_SEAICE_COST_SMR_AREA) |
| 75 |
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* gradient check in Exp. 6a of natl_box_adjoint/ |
| 76 |
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o natl_box_adjoint input_seaice for Lab. Sea now available online via wget |
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(see README file) |
| 78 |
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| 79 |
checkpoint57q_post |
checkpoint57q_post |
| 80 |
o fix initialisation Pb in calc_gw (get NANs in exp5 with g77) |
o fix initialisation Pb in calc_gw (get NANs in exp5 with g77) |
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