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revision 1.519 by heimbach, Thu Jul 28 14:35:47 2005 UTC revision 1.543 by edhill, Sat Sep 10 18:30:05 2005 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7  o adding precip control xx_precip  o various changes to mnc including:
8  o moved ptracer ctrl index 17 -> 32    - all files use the new "BASENAME[[.ITER].{t|f}NUM].nc" format
9      - output can now be grouped so that all files within a group
10          change the ITER portion of their names in lock-step together
11      - can now read ("global") PER-FACE (in addition to PER-TILE) files
12          and works with both EXCH1 and EXCH2 (but needs more testing)
13      - writing works for all verification test cases w/ g77 on Linux
14    
15    checkpoint57r_post
16    o make MNC variable initialization happen earlier
17    o add diagnostics for (almost) each term of the momentum Eq.
18    o remove SST,SSS,UVEL_k2,VVEL_k2 diagnostics.
19    o move pkg timeave out of pkg-groups "oceanic" & "atmospheric" (pkg/pkg_groups)
20    o remove MINIMAL_TAVE_OUTPUT option ;
21      add "dumpInitAndLast" to replace "nodumps" (and MINIMAL_TAVE_OUTPUT).
22    o move some basic S/R (used elsewhere in the code) from pkg/mdsio to eesupp/src
23      allows to compile without pkg/mdsio (& test successfully hs94.1x64x5)
24    o add MNC output for adjoint of EXF (adexf), SEAICE (adseaice)
25    o add time-dependent SST, SSS control
26    o cost terms in ecco/ modularized (new cost_generic.F)
27    o cost_averages routines are modularized (new cost_averagesgeneric.F)
28    o new infrastructure for seaice model vs. obs misfits in seaice/
29      * driver from the_main_loop.F is seaice_cost_driver.F
30      * first term is AREA vs. SMR observation misfit (ALLOW_SEAICE_COST_SMR_AREA)
31      * gradient check in Exp. 6a of natl_box_adjoint/
32    o natl_box_adjoint input_seaice for Lab. Sea now available online via wget
33      (see README file)
34    
35    checkpoint57q_post
36    o fix initialisation Pb in calc_gw (get NANs in exp5 with g77)
37    o fix annoying months-old bug in mnc/mdsio output for seaice pkg
38      - bug was reported by Jean-Michel and Ian Fenty
39    o fix initialization Pb in AIM-Ocean coupled model (aim_sice2aim.F)
40      update exp. cpl_aim+ocn output.
41    o Implement 4-level checkpointing: AUTODIFF_4_LEVEL_CHECKPOINT
42      Needed for high-res. runs with large global files
43      to be able to limit tapelev size
44    o Changed some tests for adjoint:
45      * carbon/ now tests AUTODIFF_2_LEVEL_CHECKPOINT
46      * natl_box_adjoint/code_bulk/ tests AUTODIFF_4_LEVEL_CHECKPOINT
47      * global_ocean.90x40x15/ back to default 3-level checkpointing
48    o Modifications to enable scripted COMMON to MODULE conversion
49      * verification/OpenAD/code/ has necessary scripts and description;
50      * converts, compiles and runs successfully;
51    
52    checkpoint57p_post
53    o reading of delXfile & delYfile moved from ini_parms.F to ini_grid.F
54    o move ${PKG}_MNC_INIT from ${PKG}_READ_PARAMS to ${PKG}_INIT_FIXED
55      (already the case for some pkgs, including recent MNC_init, e.g. thsice)
56    o call CALC_GW from DYNAMICS (instead of from FORWARD_STEP)
57    o Dissipation & phiHyd gradient are always added to gU,gV in timestep.F
58      (was already the case for dissipation with mom_vecinv,
59       and also the case for grad.PhiHyd when staggered-timeStep)
60      This will allow to put dissipation out-off the AB time-stepping.
61     Unfortunately, affects truncation error. Update output of exp. that "fails"
62      (cg2d matching number) and leave the others for later: front_relax(10),
63      global_ocean_pressure(10),ideal_2D_oce(10),internal_wave(9),lab_sea(12),
64      matrix_example(7!),natl_box(12),plume_on_slope(11),vermix(12x3,11x2).
65    
66    checkpoint57o_post
67    o fix MNC/MDSIO flags in PTRACERS so that (1) it works, and
68      (2) its ready to be documented during the 20050801 DocFest
69    o MNC-ify the gmredi package -- tested and works w/ and w/o mnc
70      for ideal_2D_oce and lab_sea on linux_ia32_g77
71    o set to #undef CTRL_SET_OLD_MAXCVARS_30
72      in global1x1_tot/code_seaice_adj to access indices 32, 33
73      (worth another tag)
74    
75    checkpoint57n_post
76    o adding precip control xx_precip 32
77    o adding swflux control xx_swflux 33
78    o Replacing 10 forcing penalty cost routines by 1 generic.
79    o Implementing partitioning in time-mean and variable adjustment
80      for atmos. state.
81    o Time-mean constant error is now read in data.ecco (instead of hard-coded)
82  o in natl_box_adjoint:  o in natl_box_adjoint:
83    * updated: results_bulk/    * updated exp 1 to 10
84    * not yet updated: results/, results_seaice/      (but does not have time-mean vs. variable split results yet)
85    o updated global1x1/*_seaice_adj/
86      to incorporate latest changes
87    o enable useSingleCpuIO for mdsio vector routines
88      (applies in particular to tapelev I/O)
89    o removed inefficient K-loop in all active_file*control*.F
90    
91  checkpoint57m_post  checkpoint57m_post
92  o re-arrange exp. adjustment.cs-32x32x1 (adjust_nlfs.cs-32x32x1 merge into)  o re-arrange exp. adjustment.cs-32x32x1 (adjust_nlfs.cs-32x32x1 merge into)

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