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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o add PTRACERS (PTR0[1-5]) to testreport output |
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o exf_check_range: |
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* default changed to .TRUE. |
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* will check values for niter0 if debLevA, every timestep if debLevB |
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* STOP in exf_check_range if 'out of range' |
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* range chosen generous to allow for potential extema |
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TBD: a version with stricter range |
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permitted range would be runtime parameters |
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o GMredi: |
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- fix ldd97 slope limit ; extend valid domain of Psi-Bolus ; |
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- change S/R GRAD_SIGMA to be valid in the overlap on CS-grid. |
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- change the default GMREDI_OPTIONS.h: compile everything except Visbeck |
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o GCHEM: |
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- move call to GCHEM_FORCING_SEP, so that it is now called before |
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the blocking exchanges to avoid computing halos in GCHEM_FORCING_SEP |
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- introduced a useGCHEM runtime flag and applied it everywhere. |
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- renamed PTRACERS_SEPARATE_FORCING to GCHEM_SEPARATE_FORCING; |
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this flag is now only visible within GCHEM-pkg routines. |
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- moved gchem_forcing_int temporarily into ptracers_forcing, this will |
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be replaced by a 3D array that is computed before thermodynamics; for |
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this, the tracer ID iTracer had to be included into the parameter list |
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of ptracers_forcing |
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- set up forward_step for a call to gchem_forcing, that will replace |
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gchem_forcing_int in ptracers_forcing |
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- cleaning up |
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o small cleaning of exch2: remove files that are also in eesupp/src |
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checkpoint56 |
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o AIM: read land-Fraction earlier (from ini-fixed) and monitor land at nIter0 |
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o mnc: cleanup "full" files--fixes out-of-memory problem |
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o ECCO-GODAE |
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* model/, pkg/, code/, input/ now complete w.r.t. ECCO-GODAE production setup |
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* fully merged and updated from SIO code |
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windstress sign change affects |
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- exf_inscal_[u/v]stress |
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- sign of xx_tau[u/v] adjustments |
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- signs in cost_scat |
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* ctrl_get_gen: avoid update of tau[u/v] for first few days |
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* natl_box_adjoint updated and compressed |
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* 2-level checkpoint switch added |
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(tested in EXP. 1 of natl_box_adjoint) |
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* new switch doInitXX to avoid init. of xx_... in optimcycle=0 |
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o SVD |
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* first complete, non-hacked version for SVD calculations |
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* all interfaces clean w.r.t to handling of xx_..., adxx_..., g_xx_... |
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performed via direct access files admtlm_vector.it???? |
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(via ctrl_[un]pack) |
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* optimcycle is used for ARPACK iteration counter |
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(note: adxx_... is iterated, rather than xx_...; latter is constant!) |
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* EV problem ok w.r.t. L2-norm in tangent space; need to check other norms |
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and add linear transforms where necessary |
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* controls are initial/final SST, SSS (can be extended; need to check |
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ctrl_set_[un]pack_xyz.F according to ctrl_set_[un]pack_xy.F |
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o mdsio: filename info to both stderr, stdout |
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o exf: exf_inscal_runoff: separated default conversion [m/year] -> [m/sec] |
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from sign change |
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checkpoint55j_post |
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o isolate dissipation tendency (allow to keep it out off AB) in V.I form. |
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affects (truncation level) output.txt of global_ocean.cs32x15(&.thsice) |
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o add consistent build directories and .cvsignore files to verification |
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o added viscA4GridMin and viscA4GridMax for more control on biharmonic viscosity |
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o make all subroutines 30 or less characters in length for certain older |
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compilers to work (a thorough search only turns up two routines in |
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pkg/ptracers) |
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o allow (vecinv only) a different horiz. viscosity for Divergence and Vorticity; |
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affects (truncation level) output.txt of global_ocean.cs32x15(&.thsice) |
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checkpoint55i_post |
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o change arrays for total vertical diffusivity (2.D if explicit, |
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3.D if implicit) ; each ptracer uses its own background value. |
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o added mnc/NetCDF output capability to ocn_compon_interf |
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- added bits to verification/cpl_aim+ocn so that it can run on |
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ITRDA and other clusters without the mpirun "-wd" option |
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o fixed wayward endif in mom_fluxform.F that messed up cyclindrical |
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configuration |
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o give MNC the ability to create additional files rather than |
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exceeding a specified file size limit "MNC_MAX_FILESIZE" |
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- the default is just less than 2GB which is a practical limit |
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on many systems |
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o Compute the non-local term using either KPP vertical diffusivity (=default) |
o Compute the non-local term using either KPP vertical diffusivity (=default) |
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or the total vertical diffusivity (when KPP_ghatUseTotalDiffus=T) |
or the total vertical diffusivity (when KPP_ghatUseTotalDiffus=T) |
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