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revision 1.390 by jmc, Sun Nov 21 22:22:31 2004 UTC revision 1.401 by jmc, Sat Dec 4 00:24:17 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    o depth convergence accelerator: replace deltaTtracer by dTtracerLev(k)
7      (not yet implemented for implicit vertical diffusion & advection)
8    o OBCS: extend application of tracer open boundary conditions
9      to a strip beyond the boundary of width Olx/Oly
10    
11    checkpoint56c_post
12    o OBCS as control variables
13      - update ctrl_ad_diff.list, obcs_ad_diff.list
14      - remove balance of obcs controls from default
15      - fix index bug nobcs in ctrl_init
16      - fix dummy fields filen in ctrl_pack
17      - add dummy weights for obcs
18    o lsopt: comment out fort.94 output
19    o optim:
20      - remove unnecessary header files
21      - adjusted namelists
22      - add xerbla.F to Makefile
23    o exf:
24      - multiple modifications of exf_check_range
25      - unit change in exf_init_runoff from [m/year] to [m/s]
26    o mdsio:
27      - i/o-vector change debugLevel from debLevA to debLevB
28    
29    checkpoint56b_post
30    o collect all ptracers output in an new routine (PTRACERS_OUTPUT) that
31      is called from DO_THE_MODEL_IO
32      - rename PTRACERS_STATV_WRITE to PTRACERS_WRITE_TIMEAVE
33      - introduce new parameter PTRACERS_dumpFreq (defaults to dumpFreq)
34      - clean up PTRACERS_WRITE_TIMEAVE a little
35    o add another verification experiment that tests both the cfc-pkg and
36      the gchem-pkg with GCHEM_SEPARATE_FORCING undefined, that is with
37      reactive tendencies treated inline with regular timestepping
38    o testreport previously did a lousy job of comparing small numbers, so
39      we (Ed and Martin) changed the  way the cut-off of 1.e-12 is
40      implemented in the little c-progam tmp_cmpnum.c which is embedded in
41      testreport.
42    o ptracers_monitor: bug fix for MPI
43    
44    checkpoint56a_post
45    o GCHEM: finish reorganizating the package
46      - forward_step calls GCHEM_CALC_TENDENDY, which computes gchemTendency
47        (introduces another 3D-array for each passive tracer, but only if
48        GCHEM_SEPARATE_FORCING is undefined. For GCHEM_SEPARATE_FORCING
49        gchemTendency is not needed because the timestep is done separately)
50      - gchemTendency is added to gPtr in GCHEM_ADD_TENDENCY
51      - GCHEM is now---more or less cleanly---separate from PTRACERS
52      - to bo done: handling of surfaceForcingPtr that is needed for KPP not
53        so clear to me how that should be done in a general way.
54    o CFC: improve formatting of output in CFC_ATMOS
55    o PTRACERS:
56      - rename GCHEM_MONITOR to PTRACERS_MONITOR and call it from MONITOR, so
57        that ALL experiments with ptracers enable can be checked. This makes
58        GCHEM_MONITOR obsolete.
59      - include a runtime parameter PTRACERS_monitorFreq that defaults to
60        monitorFreq
61      - set default PTRACERS_write_mdsio to false if PTRACERS_write_mnc is true
62    o add PTRACERS (PTR0[1-5]) to testreport output
63    o exf_check_range:
64      * default changed to .TRUE.
65      * will check values for niter0 if debLevA, every timestep if debLevB
66      * STOP in exf_check_range if 'out of range'
67      * range chosen generous to allow for potential extema
68      TBD: a version with stricter range
69           permitted range would be runtime parameters
70  o GMredi:  o GMredi:
71    - fix ldd97 slope limit ; extend valid domain of Psi-Bolus ;    - fix ldd97 slope limit ; extend valid domain of Psi-Bolus ;
72    - change S/R GRAD_SIGMA to be valid in the overlap on CS-grid.    - change S/R GRAD_SIGMA to be valid in the overlap on CS-grid.
# Line 11  o GCHEM: Line 75  o GCHEM:
75    - move call to GCHEM_FORCING_SEP, so that it is now called before    - move call to GCHEM_FORCING_SEP, so that it is now called before
76      the blocking exchanges to avoid computing halos in GCHEM_FORCING_SEP      the blocking exchanges to avoid computing halos in GCHEM_FORCING_SEP
77    - introduced a useGCHEM runtime flag and applied it everywhere.    - introduced a useGCHEM runtime flag and applied it everywhere.
78      - renamed PTRACERS_SEPARATE_FORCING to GCHEM_SEPARATE_FORCING;
79        this flag is now only visible within GCHEM-pkg routines.
80      - moved gchem_forcing_int temporarily into ptracers_forcing, this will
81        be replaced by a 3D array that is computed before thermodynamics; for
82        this, the tracer ID iTracer had to be included into the parameter list
83        of ptracers_forcing
84      - set up forward_step to call gchem_forcing, that will replace
85        gchem_forcing_int in ptracers_forcing
86      - cleaning up
87  o small cleaning of exch2: remove files that are also in eesupp/src  o small cleaning of exch2: remove files that are also in eesupp/src
88    
89  checkpoint56  checkpoint56
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