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revision 1.335 by jmc, Tue Jul 27 00:44:10 2004 UTC revision 1.348 by jmc, Tue Sep 21 15:47:59 2004 UTC
# Line 2  $Header$ Line 2  $Header$
2    
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    o use a more standard discretization for biharmonic viscosity ;
6     (original version still available with #define MOM_VI_ORIGINAL_VISCA4 )
7      affects results of dome set-up: update output.txt
8    o fix gad_advection.F (CubedSphere part), back to version 1.23
9    o fix bug in mom_vi_del2uv.F (CubedSphere part).
10    
11    checkpoint55a_post
12    o merged code to
13      * prescribe/read time-dependent open boundaries
14        (works in conjunction with exf, cal)
15      * sponge layer code for open boundaries
16      * each boundary N/S/E/W now has its own CPP option
17        (healthy for the adjoint)
18    
19    checkpoint55
20    o up-to-date adjoint of previous breaks
21      - natl_box_adjoint: problem for exp 12, 13: cost = 0. needs fix
22      - global_ocean_ebm: adjoint still needs fix (TLM ok)
23      - global_ocean.90x40x15: extended GMREDI_OPTIONS.h
24      - carbon: * remove tr1-related adjoint verification
25                * add ptracer as control variable
26    o remove all tr1-related code (ALLOW_PASSIVE_TRACER)
27      (adjoint stuff still has some tr1 'names', but all use ptracer arrays)
28    
29    checkpoint54f_post
30    o in verification/carbin/ remove experiment related to
31      ALLOW_PASSIVE_TRACER (array tr1 etc)
32      code_ad/ input_ad/ results_ad
33    
34    o add two new packages
35      - ggl90, TKE-model of Gaspar et al. (1990), Blanke+Delecluse (1993)
36        + subject to optimization (memory)
37      - opps, OPPS (ocean penetrative plume scheme) of Paluszkiewicz+Romea (1997)
38        + subject to reordering (many GOTOs in the original code)
39        + so far opps is called for every (i,j) point, and then operates in
40          the vertical; one may want to reorder the scheme in order operate in
41          horizontal slabs at the cost of (a lot of) memory, at least ten new 3D
42          fields)
43    o overhaul of IO so that we now have flags for MDSIO and/or MNC
44      - all verification tests compile and run with linux_ia32_g77
45      - defaults are compatible with current input files--nothing
46        should change if you were not previously using MNC
47      - MNC output has been added in numerous places (eg. timeave)
48        but there are still a few writes not yet do-able with MNC
49        (this is in progress)
50      - flags now allow for either/or/both use of MDSIO and MNC and
51        documentation will soon follow
52      - numerous small formatting cleanups for ProTeX
53    o add version info (via BUILD_INFO.h) to MNC and stdout
54    
55    checkpoint54e_post
56    o add two new packages
57      - pp81 (Packanowski and Philander, 1981), Richardson number and
58        stratification dependent mixing
59      - my82 (Mellor and Yamada, 1982) level 2 turbulence closure scheme
60      - these scheme operate in a similar manner as KPP (without ghat, of
61        course), however there is only one diffusivity that is used for both
62        temperature and salinity (and passive tracers)ç
63    o add offline package
64    o add "verification/dic_example" which contains a dic-gchem-ptracer setup
65      provided by Stephanie Dutkiewicz
66    o genmake2: add ability to search for C compilers and cleanup test output
67      - fixes recent SX-6 problems and should help with others (eg. HP-UX)
68    
69    checkpoint54d_post
70    o data.diagnostics: if levels() is unspecified then ALL levels are diagnosed
71    o bug fix in pkg/cal/cal_addtime.F for TheCalendar='model' day count is wrong,
72      leading to additional shift by 5 days each year of integration
73       (i.e. leading to considerable offset over the years)
74  o update global_ocean.cs32x15/thsice: use z* + RealFW + staggerTimeStep  o update global_ocean.cs32x15/thsice: use z* + RealFW + staggerTimeStep
75  o start with no AB and no initial filtering (staggerTimeStep):  o start with no AB and no initial filtering (staggerTimeStep):
76    change the results of test-exp: hs94.128x64x5, hs94.1x64x5 & hs94.cs-32x32x5    change the results of test-exp: hs94.128x64x5, hs94.1x64x5 & hs94.cs-32x32x5

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