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revision 1.281 by mlosch, Mon Apr 19 23:25:15 2004 UTC revision 1.319 by heimbach, Fri Jul 2 17:59:46 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    checkpoint54
7    checkpoint53g_post
8    o prepare splitting of thermodynamics: store convect.counter in common block
9    o store d.etaH/dt (instead of Div.hV) in common ; affects (truncation error)
10      output of: global_ocean.cs32x15, global_ocean_pressure & internal_wave
11    o cnh's modifs to gad_advection.F for cube-sphere multi-dim advection
12    o new parameter "nShapS": allow to treat differently S from T (nShapT)
13    o separate Vert.Advec.Scheme from horizontal Advec.Scheme (T & S)
14    o restore adjointability
15    
16    checkpoint53f_post
17    o modifications that affect AIM experiment results (update output.txt):
18      - no advection of S at top interface Nr (pkg/generic_advdiff)
19      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
20    o AIM pkg:
21      - include stability function into surf.Flux derivative relative to Tsurf
22      - calculate clear-sky radiation & surface temp. change (for diagnostics)
23    
24    checkpoint53e_post
25    o merged cylindrical coord configuration
26    o added rotating_tank experiment
27    checkpoint53e_pre
28    
29    checkpoint53d_post
30    o faulks upgraded: re-generate output.txt that have changed:
31       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
32    o Added Bryan and Lewis, 1979, vertical diffusivity profile
33    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
34    o added Sadourny discretization of Coriolis
35      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
36      - re-enabled use of omega3 (useAbsVorticity)
37    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
38      vector-invariant equations
39      - note: does *NOT* yet use same variable visc. for no-slip BC's.
40    o recoded the lateral boundary conditions for non-hydrostatic w, this time
41      hopefully without new bugs
42      - still to do: biharmonic friction for non-hydrostatic w
43    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
44    o regenerated output for global_ocean_ebm (using -ieee)
45    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
46      of mom_common/
47      - simple re-arrangement of instructions within computing loop
48    checkpoint53d_pre
49    
50    checkpoint53c_post
51    o new version of coupler for AIM+thSIce and Ocean models
52     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
53     - land: change Evaporation of snow
54     - aim with thSIce: fix bug in snow-precip.
55    o changes to calc_gw.F
56     - bug fix for w^2 term near the bottom boundary
57     - (hopefully) improve the lateral slip boundary condtions for use with
58        partial/looped cells
59      - because the bug fix changes two verification experiments anyway (exp5
60        and plume on slope), change the lateral boundary condition from half slip
61        to the value of no_slip_sides
62    o ebm package wasnt quite up to the parallel task. Fixed that.
63    o Adjoint of EBM package + verification
64      * TLM OK
65      * ADM not sufficient accuracy yet (needs further testing)
66    
67    checkpoint53b_post
68    o Commiting new energy balance model to repository
69      * package is pkg/ebm
70      * verif. is verification/global_ocean_ebm
71      * references are in ebm_driver.F
72    C      * X. Wang, P. Stone and J. Marotzke, 1999:
73    C        Global thermohaline circulation. Part I:
74    C        Sensitivity to atmospheric moisture transport.
75    C        J. Climate 12(1), 71-82
76    C      * X. Wang, P. Stone and J. Marotzke, 1999:
77    C        Global thermohaline circulation. Part II:
78    C        Sensitivity with interactive transport.
79    C        J. Climate 12(1), 83-91
80    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
81    C        Destabilization of the thermohaline circulation
82    C        by atmospheric eddy transports.
83    C        J. Climate 7(12), 1870-1882
84    o Will need long integration testing.
85    checkpoint53b_pre
86    
87    o created pkg/mom_common in preparation for variable viscosity code
88    o renamed and split ini_mnc_io
89    o pkg/land: only liquid water can diffuse or run-off
90    o AIM using land: soil wetness availability account for snow
91    o added printMapIncludesZeros to EEPARMS namelist
92    
93    checkpoint53a_post
94    o restore TAMC compatiility for exf_constants.h
95      (no usage of _d in .h)
96    o Additional storing in KPP in an attempt to fix
97      TAMC problem with adjoint of KPP code.
98      (no success...)
99      Identical code works fine with TAF.
100    o Fixed verification/natl_box_adjoint experiments.
101      Initial conditions for Experiments 4 and 5 are now
102      set to "SEAICE_initialHEFF=0", which is more reasonable,
103      and hence gives results closer to that of Experiment 2.
104      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
105    
106    checkpoint53
107    o stable checkpoint with up to date adjoint
108      TLM tests only run for 1st grdchk at the moment. Its unclear if
109      this is a code problem or a problem with resetting code for g_
110      variables that is being autogenerated wrong.
111      Otherwise:
112       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
113       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
114         are both still in chaos following their security messes.
115    
116    checkpoint52n_post
117    o various build (mostly genmake2) changes including:
118      - ability to build/run more easily within Cygwin and MacOS X
119      - more complicated Makefiles with a stronger dependence on Gnu Make
120    o pkg/seaice modifications
121      - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
122        of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer
123        and SEAICE_deltaTdyn must be integer multiple of SEAICE_deltaTtherm
124      - changed proxy for geostrophic velocity and updated
125        verification/lab_sea/results/* accordingly
126      - removed ADI dynamic solver from pkg/seaice
127      - replaced all occurrences of 1/CSTICE or 1/CSUICE
128        they caused a segmentation fault under certain circumstances
129      - removed unused field WATR
130    o bug fix in exf-package:
131      -  u/vwind are defined at tracer/pressure points. The values of u/vwindmask
132         now reflect that.
133  o small fixes in the cal-package:  o small fixes in the cal-package:
134    - set reference date to first of January for the 'model'-calendar    - set reference date to first of January for the 'model'-calendar
135    - failing of cal_CheckDate in cal_FullDate now actually results in a    - failing of cal_CheckDate in cal_FullDate now actually results in a

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