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revision 1.301 by adcroft, Mon May 24 14:10:02 2004 UTC revision 1.340 by stephd, Wed Sep 1 16:57:12 2004 UTC
# Line 2  $Header$ Line 2  $Header$
2    
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    o add offline package
6    o add "verification/dic_example" which contains a dic-gchem-ptracer setup
7      provided by Stephanie Dutkiewicz
8    o genmake2: add ability to search for C compilers and cleanup test output
9      - fixes recent SX-6 problems and should help with others (eg. HP-UX)
10    
11    checkpoint54d_post
12    o data.diagnostics: if levels() is unspecified then ALL levels are diagnosed
13    o bug fix in pkg/cal/cal_addtime.F for TheCalendar='model' day count is wrong,
14      leading to additional shift by 5 days each year of integration
15       (i.e. leading to considerable offset over the years)
16    o update global_ocean.cs32x15/thsice: use z* + RealFW + staggerTimeStep
17    o start with no AB and no initial filtering (staggerTimeStep):
18      change the results of test-exp: hs94.128x64x5, hs94.1x64x5 & hs94.cs-32x32x5
19    o move ocean specific S/R calls from forward_step.F to do_oceanic_phys.F
20      (external loading & cpl import/export stay in forward_step.F)
21    o update coupling interface to work with new staggerTimeStep
22    o change MDSIO ptracers_pickup.
23    o fix a bug in Flux deriv. vs Ts (pkg/aim_v23/phy_suflux_sice.F);
24    o genmake2 fixes so netcdf now works on halem ("osf1_alpha_*")
25    o bugs fixed in kpp_calc.F (ustarY) and external_forcing.F (Qsw & Partial-cell)
26    
27    checkpoint54c_post
28    o replace surfaceTendency U,V,S,T,Tice,Ptr by surfaceForcing U,V,S,T,Tice,Ptr
29      this affects (truncation error) output.txt of test-exp:
30       global_ocean_ebm,_pressure,.cs32x15(&.thsice), lab_sea & natl_box
31    o pkg/kpp: replace pMask by maskC to reduce memory size (one 3.D array)
32    o change Qnet to always be the net heat flux, (+upward).
33      affects (truncation error) output of natl_box exp.: updated
34    o define the max number of passive tracers in PTRACERS_SIZE.h
35    o start to test mnc routinely in exp0
36    o add sea-ice loading (sIceLoad) as a new forcing field.
37    
38    checkpoint54b_post
39    o add testreport "-j JOBS" option for parallel builds (tested and pretty
40       impressive on Altix and Opteron systems)
41    o diagnostics can now write NetCDF files through the mnc package
42    o staggerTimeStep & NLFS: update pkg aim_v23 & thsice; update aim.5l_cs output
43    o staggerTimeStep & multi-Dim-Advec: Exch(U,V) added
44    o staggerTimeStep & NLFS: rescale T & S surface tendencies.
45      affects (truncation error) output of lab_sea & natl_box exp.: updated
46    o change pickup _cd & _ptracers (old pickup restart: usePickupBeforeC54=.T.)
47    
48    checkpoint54a_post
49    o re-write staggerTimeStep: step fwd U,V and then T,S (reverse the order).
50    o change pickup file (to restart from old pickup, set usePickupBeforeC54=.T.)
51    o get a perfect restart when using RealFreshWaterFlux + NLFS (not finished)
52    o update output of all exp. that use staggerTimeStep (except hs94.cs & 2D)
53      + internal_wave (shift in writing cg2d_ini_res)
54    checkpoint54a_pre
55    
56    o require forcing_In_AB=.FALSE. and remove surfaceTendencyTice from pkg/seaice
57      - modified verification/lab_sea and natl_box_adjoint accordingly
58    
59    checkpoint54
60    checkpoint53g_post
61    o prepare splitting of thermodynamics: store convect.counter in common block
62    o store d.etaH/dt (instead of Div.hV) in common ; affects (truncation error)
63      output of: global_ocean.cs32x15, global_ocean_pressure & internal_wave
64    o cnh's modifs to gad_advection.F for cube-sphere multi-dim advection
65    o new parameter "nShapS": allow to treat differently S from T (nShapT)
66    o separate Vert.Advec.Scheme from horizontal Advec.Scheme (T & S)
67    o restore adjointability
68    
69    checkpoint53f_post
70    o modifications that affect AIM experiment results (update output.txt):
71      - no advection of S at top interface Nr (pkg/generic_advdiff)
72      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
73    o AIM pkg:
74      - include stability function into surf.Flux derivative relative to Tsurf
75      - calculate clear-sky radiation & surface temp. change (for diagnostics)
76    
77    checkpoint53e_post
78    o merged cylindrical coord configuration
79    o added rotating_tank experiment
80    checkpoint53e_pre
81    
82    checkpoint53d_post
83    o faulks upgraded: re-generate output.txt that have changed:
84       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
85    o Added Bryan and Lewis, 1979, vertical diffusivity profile
86    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
87    o added Sadourny discretization of Coriolis
88      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
89      - re-enabled use of omega3 (useAbsVorticity)
90    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
91      vector-invariant equations
92      - note: does *NOT* yet use same variable visc. for no-slip BC's.
93    o recoded the lateral boundary conditions for non-hydrostatic w, this time
94      hopefully without new bugs
95      - still to do: biharmonic friction for non-hydrostatic w
96    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
97    o regenerated output for global_ocean_ebm (using -ieee)
98  o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation  o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
99    of mom_common/    of mom_common/
100    - simple re-arrangement of instructions within computing loop    - simple re-arrangement of instructions within computing loop

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