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revision 1.287 by dimitri, Wed May 5 00:23:37 2004 UTC revision 1.322 by jmc, Tue Jul 6 02:44:27 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    checkpoint54a_post
7    o re-write staggerTimeStep: step fwd U,V and then T,S (reverse the order).
8    o change pickup file (to restart from old pickup, set usePickupBeforeC54=.T.)
9    o get a perfect restart when using RealFreshWaterFlux + NLFS (not finished)
10    o update output of all exp. that use staggerTimeStep (except hs94.cs & 2D)
11      + internal_wave (shift in writing cg2d_ini_res)
12    checkpoint54a_pre
13    
14    o require forcing_In_AB=.FALSE. and remove surfaceTendencyTice from pkg/seaice
15      - modified verification/lab_sea and natl_box_adjoint accordingly
16    
17    checkpoint54
18    checkpoint53g_post
19    o prepare splitting of thermodynamics: store convect.counter in common block
20    o store d.etaH/dt (instead of Div.hV) in common ; affects (truncation error)
21      output of: global_ocean.cs32x15, global_ocean_pressure & internal_wave
22    o cnh's modifs to gad_advection.F for cube-sphere multi-dim advection
23    o new parameter "nShapS": allow to treat differently S from T (nShapT)
24    o separate Vert.Advec.Scheme from horizontal Advec.Scheme (T & S)
25    o restore adjointability
26    
27    checkpoint53f_post
28    o modifications that affect AIM experiment results (update output.txt):
29      - no advection of S at top interface Nr (pkg/generic_advdiff)
30      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
31    o AIM pkg:
32      - include stability function into surf.Flux derivative relative to Tsurf
33      - calculate clear-sky radiation & surface temp. change (for diagnostics)
34    
35    checkpoint53e_post
36    o merged cylindrical coord configuration
37    o added rotating_tank experiment
38    checkpoint53e_pre
39    
40    checkpoint53d_post
41    o faulks upgraded: re-generate output.txt that have changed:
42       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
43    o Added Bryan and Lewis, 1979, vertical diffusivity profile
44    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
45    o added Sadourny discretization of Coriolis
46      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
47      - re-enabled use of omega3 (useAbsVorticity)
48    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
49      vector-invariant equations
50      - note: does *NOT* yet use same variable visc. for no-slip BC's.
51    o recoded the lateral boundary conditions for non-hydrostatic w, this time
52      hopefully without new bugs
53      - still to do: biharmonic friction for non-hydrostatic w
54    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
55    o regenerated output for global_ocean_ebm (using -ieee)
56    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
57      of mom_common/
58      - simple re-arrangement of instructions within computing loop
59    checkpoint53d_pre
60    
61    checkpoint53c_post
62    o new version of coupler for AIM+thSIce and Ocean models
63     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
64     - land: change Evaporation of snow
65     - aim with thSIce: fix bug in snow-precip.
66    o changes to calc_gw.F
67     - bug fix for w^2 term near the bottom boundary
68     - (hopefully) improve the lateral slip boundary condtions for use with
69        partial/looped cells
70      - because the bug fix changes two verification experiments anyway (exp5
71        and plume on slope), change the lateral boundary condition from half slip
72        to the value of no_slip_sides
73    o ebm package wasnt quite up to the parallel task. Fixed that.
74    o Adjoint of EBM package + verification
75      * TLM OK
76      * ADM not sufficient accuracy yet (needs further testing)
77    
78    checkpoint53b_post
79    o Commiting new energy balance model to repository
80      * package is pkg/ebm
81      * verif. is verification/global_ocean_ebm
82      * references are in ebm_driver.F
83    C      * X. Wang, P. Stone and J. Marotzke, 1999:
84    C        Global thermohaline circulation. Part I:
85    C        Sensitivity to atmospheric moisture transport.
86    C        J. Climate 12(1), 71-82
87    C      * X. Wang, P. Stone and J. Marotzke, 1999:
88    C        Global thermohaline circulation. Part II:
89    C        Sensitivity with interactive transport.
90    C        J. Climate 12(1), 83-91
91    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
92    C        Destabilization of the thermohaline circulation
93    C        by atmospheric eddy transports.
94    C        J. Climate 7(12), 1870-1882
95    o Will need long integration testing.
96    checkpoint53b_pre
97    
98    o created pkg/mom_common in preparation for variable viscosity code
99    o renamed and split ini_mnc_io
100    o pkg/land: only liquid water can diffuse or run-off
101    o AIM using land: soil wetness availability account for snow
102    o added printMapIncludesZeros to EEPARMS namelist
103    
104    checkpoint53a_post
105    o restore TAMC compatiility for exf_constants.h
106      (no usage of _d in .h)
107    o Additional storing in KPP in an attempt to fix
108      TAMC problem with adjoint of KPP code.
109      (no success...)
110      Identical code works fine with TAF.
111    o Fixed verification/natl_box_adjoint experiments.
112      Initial conditions for Experiments 4 and 5 are now
113      set to "SEAICE_initialHEFF=0", which is more reasonable,
114      and hence gives results closer to that of Experiment 2.
115      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
116    
117    checkpoint53
118    o stable checkpoint with up to date adjoint
119      TLM tests only run for 1st grdchk at the moment. Its unclear if
120      this is a code problem or a problem with resetting code for g_
121      variables that is being autogenerated wrong.
122      Otherwise:
123       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
124       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
125         are both still in chaos following their security messes.
126    
127    checkpoint52n_post
128    o various build (mostly genmake2) changes including:
129      - ability to build/run more easily within Cygwin and MacOS X
130      - more complicated Makefiles with a stronger dependence on Gnu Make
131  o pkg/seaice modifications  o pkg/seaice modifications
132    - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost    - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
133      of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer      of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer

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