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revision 1.285 by dimitri, Mon May 3 06:58:39 2004 UTC revision 1.318 by heimbach, Fri Jul 2 16:00:06 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    checkpoint53g_post
7    o prepare splitting of thermodynamics: store convect.counter in common block
8    o store d.etaH/dt (instead of Div.hV) in common ; affects (truncation error)
9      output of: global_ocean.cs32x15, global_ocean_pressure & internal_wave
10    o cnh's modifs to gad_advection.F for cube-sphere multi-dim advection
11    o new parameter "nShapS": allow to treat differently S from T (nShapT)
12    o separate Vert.Advec.Scheme from horizontal Advec.Scheme (T & S)
13    o restore adjointability
14    
15    checkpoint53f_post
16    o modifications that affect AIM experiment results (update output.txt):
17      - no advection of S at top interface Nr (pkg/generic_advdiff)
18      - air surf. temp: use lower value between T0 & T1 (phy_suflux_prep.F)
19    o AIM pkg:
20      - include stability function into surf.Flux derivative relative to Tsurf
21      - calculate clear-sky radiation & surface temp. change (for diagnostics)
22    
23    checkpoint53e_post
24    o merged cylindrical coord configuration
25    o added rotating_tank experiment
26    checkpoint53e_pre
27    
28    checkpoint53d_post
29    o faulks upgraded: re-generate output.txt that have changed:
30       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
31    o Added Bryan and Lewis, 1979, vertical diffusivity profile
32    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
33    o added Sadourny discretization of Coriolis
34      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
35      - re-enabled use of omega3 (useAbsVorticity)
36    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
37      vector-invariant equations
38      - note: does *NOT* yet use same variable visc. for no-slip BC's.
39    o recoded the lateral boundary conditions for non-hydrostatic w, this time
40      hopefully without new bugs
41      - still to do: biharmonic friction for non-hydrostatic w
42    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
43    o regenerated output for global_ocean_ebm (using -ieee)
44    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
45      of mom_common/
46      - simple re-arrangement of instructions within computing loop
47    checkpoint53d_pre
48    
49    checkpoint53c_post
50    o new version of coupler for AIM+thSIce and Ocean models
51     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
52     - land: change Evaporation of snow
53     - aim with thSIce: fix bug in snow-precip.
54    o changes to calc_gw.F
55     - bug fix for w^2 term near the bottom boundary
56     - (hopefully) improve the lateral slip boundary condtions for use with
57        partial/looped cells
58      - because the bug fix changes two verification experiments anyway (exp5
59        and plume on slope), change the lateral boundary condition from half slip
60        to the value of no_slip_sides
61    o ebm package wasnt quite up to the parallel task. Fixed that.
62    o Adjoint of EBM package + verification
63      * TLM OK
64      * ADM not sufficient accuracy yet (needs further testing)
65    
66    checkpoint53b_post
67    o Commiting new energy balance model to repository
68      * package is pkg/ebm
69      * verif. is verification/global_ocean_ebm
70      * references are in ebm_driver.F
71    C      * X. Wang, P. Stone and J. Marotzke, 1999:
72    C        Global thermohaline circulation. Part I:
73    C        Sensitivity to atmospheric moisture transport.
74    C        J. Climate 12(1), 71-82
75    C      * X. Wang, P. Stone and J. Marotzke, 1999:
76    C        Global thermohaline circulation. Part II:
77    C        Sensitivity with interactive transport.
78    C        J. Climate 12(1), 83-91
79    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
80    C        Destabilization of the thermohaline circulation
81    C        by atmospheric eddy transports.
82    C        J. Climate 7(12), 1870-1882
83    o Will need long integration testing.
84    checkpoint53b_pre
85    
86    o created pkg/mom_common in preparation for variable viscosity code
87    o renamed and split ini_mnc_io
88    o pkg/land: only liquid water can diffuse or run-off
89    o AIM using land: soil wetness availability account for snow
90    o added printMapIncludesZeros to EEPARMS namelist
91    
92    checkpoint53a_post
93    o restore TAMC compatiility for exf_constants.h
94      (no usage of _d in .h)
95    o Additional storing in KPP in an attempt to fix
96      TAMC problem with adjoint of KPP code.
97      (no success...)
98      Identical code works fine with TAF.
99    o Fixed verification/natl_box_adjoint experiments.
100      Initial conditions for Experiments 4 and 5 are now
101      set to "SEAICE_initialHEFF=0", which is more reasonable,
102      and hence gives results closer to that of Experiment 2.
103      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
104    
105    checkpoint53
106    o stable checkpoint with up to date adjoint
107      TLM tests only run for 1st grdchk at the moment. Its unclear if
108      this is a code problem or a problem with resetting code for g_
109      variables that is being autogenerated wrong.
110      Otherwise:
111       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
112       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
113         are both still in chaos following their security messes.
114    
115    checkpoint52n_post
116    o various build (mostly genmake2) changes including:
117      - ability to build/run more easily within Cygwin and MacOS X
118      - more complicated Makefiles with a stronger dependence on Gnu Make
119  o pkg/seaice modifications  o pkg/seaice modifications
120      - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
121        of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer
122        and SEAICE_deltaTdyn must be integer multiple of SEAICE_deltaTtherm
123    - changed proxy for geostrophic velocity and updated    - changed proxy for geostrophic velocity and updated
124      verification/lab_sea/results/output.txt accordingly      verification/lab_sea/results/* accordingly
125    - removed ADI dynamic solver from pkg/seaice    - removed ADI dynamic solver from pkg/seaice
126    - replaced all occurrences of 1/CSTICE or 1/CSUICE    - replaced all occurrences of 1/CSTICE or 1/CSUICE
127      they caused a segmentation fault under certain circumstances      they caused a segmentation fault under certain circumstances

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