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revision 1.275 by jmc, Thu Apr 8 00:25:10 2004 UTC revision 1.310 by afe, Thu Jun 24 20:22:02 2004 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    
7    checkpoint53e_pre
8    
9    checkpoint53d_post
10    o faulks upgraded: re-generate output.txt that have changed:
11       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
12    o Added Bryan and Lewis, 1979, vertical diffusivity profile
13    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
14    o added Sadourny discretization of Coriolis
15      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
16      - re-enabled use of omega3 (useAbsVorticity)
17    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
18      vector-invariant equations
19      - note: does *NOT* yet use same variable visc. for no-slip BC's.
20    o recoded the lateral boundary conditions for non-hydrostatic w, this time
21      hopefully without new bugs
22      - still to do: biharmonic friction for non-hydrostatic w
23    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
24    o regenerated output for global_ocean_ebm (using -ieee)
25    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
26      of mom_common/
27      - simple re-arrangement of instructions within computing loop
28    checkpoint53d_pre
29    
30    checkpoint53c_post
31    o new version of coupler for AIM+thSIce and Ocean models
32     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
33     - land: change Evaporation of snow
34     - aim with thSIce: fix bug in snow-precip.
35    o changes to calc_gw.F
36     - bug fix for w^2 term near the bottom boundary
37     - (hopefully) improve the lateral slip boundary condtions for use with
38        partial/looped cells
39      - because the bug fix changes two verification experiments anyway (exp5
40        and plume on slope), change the lateral boundary condition from half slip
41        to the value of no_slip_sides
42    o ebm package wasnt quite up to the parallel task. Fixed that.
43    o Adjoint of EBM package + verification
44      * TLM OK
45      * ADM not sufficient accuracy yet (needs further testing)
46    
47    checkpoint53b_post
48    o Commiting new energy balance model to repository
49      * package is pkg/ebm
50      * verif. is verification/global_ocean_ebm
51      * references are in ebm_driver.F
52    C      * X. Wang, P. Stone and J. Marotzke, 1999:
53    C        Global thermohaline circulation. Part I:
54    C        Sensitivity to atmospheric moisture transport.
55    C        J. Climate 12(1), 71-82
56    C      * X. Wang, P. Stone and J. Marotzke, 1999:
57    C        Global thermohaline circulation. Part II:
58    C        Sensitivity with interactive transport.
59    C        J. Climate 12(1), 83-91
60    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
61    C        Destabilization of the thermohaline circulation
62    C        by atmospheric eddy transports.
63    C        J. Climate 7(12), 1870-1882
64    o Will need long integration testing.
65    checkpoint53b_pre
66    
67    o created pkg/mom_common in preparation for variable viscosity code
68    o renamed and split ini_mnc_io
69    o pkg/land: only liquid water can diffuse or run-off
70    o AIM using land: soil wetness availability account for snow
71    o added printMapIncludesZeros to EEPARMS namelist
72    
73    checkpoint53a_post
74    o restore TAMC compatiility for exf_constants.h
75      (no usage of _d in .h)
76    o Additional storing in KPP in an attempt to fix
77      TAMC problem with adjoint of KPP code.
78      (no success...)
79      Identical code works fine with TAF.
80    o Fixed verification/natl_box_adjoint experiments.
81      Initial conditions for Experiments 4 and 5 are now
82      set to "SEAICE_initialHEFF=0", which is more reasonable,
83      and hence gives results closer to that of Experiment 2.
84      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
85    
86    checkpoint53
87    o stable checkpoint with up to date adjoint
88      TLM tests only run for 1st grdchk at the moment. Its unclear if
89      this is a code problem or a problem with resetting code for g_
90      variables that is being autogenerated wrong.
91      Otherwise:
92       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
93       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
94         are both still in chaos following their security messes.
95    
96    checkpoint52n_post
97    o various build (mostly genmake2) changes including:
98      - ability to build/run more easily within Cygwin and MacOS X
99      - more complicated Makefiles with a stronger dependence on Gnu Make
100    o pkg/seaice modifications
101      - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
102        of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer
103        and SEAICE_deltaTdyn must be integer multiple of SEAICE_deltaTtherm
104      - changed proxy for geostrophic velocity and updated
105        verification/lab_sea/results/* accordingly
106      - removed ADI dynamic solver from pkg/seaice
107      - replaced all occurrences of 1/CSTICE or 1/CSUICE
108        they caused a segmentation fault under certain circumstances
109      - removed unused field WATR
110    o bug fix in exf-package:
111      -  u/vwind are defined at tracer/pressure points. The values of u/vwindmask
112         now reflect that.
113    o small fixes in the cal-package:
114      - set reference date to first of January for the 'model'-calendar
115      - failing of cal_CheckDate in cal_FullDate now actually results in a
116        warning
117    o small modifications in exf-package to increase flexibility:
118      - change climtempfreeze from a constant to a runtime parameter that
119        is specified in data.exf_clim (default = -1.9)
120      - introduce runtime parameter windstressmax (default = 2.0) that is
121        specified in data.exf
122    o fix in pkg/thsice:
123      - update Evap (Tsf changes) to be consistent with Latent heat flux
124      - maintain snow precipitation unchanged (even if Tsf >=0).
125     both affect global_ocean.cs32x15/(.thsice) results ; update output.txt.thsice
126    
127    checkpoint52m_post
128    o commented out call to cal_GetMonthsRec in swfrac.F and added some comments;
129      this does not change any of the results, because myIter=0 in swfrac always
130      lead to jwtype=2 (the default anyway), but the call makes little sense
131      as a default
132    o no SHORTWAVE HEATING lost at the bottom; affects lab_sea output; updated
133  o re-work pkg/thsice interface with ocean & bulk_force pkg to allow  o re-work pkg/thsice interface with ocean & bulk_force pkg to allow
134    atmospheric model (AIM) to use it ; add a "slab ocean" component.    atmospheric model (AIM) to use it ; add a "slab ocean" component.
135  o pkg/aim_v23 : add interface to call thermodynamic sea-ice (thsice)  o pkg/aim_v23 : add interface to call thermodynamic sea-ice (thsice)

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