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revision 1.275 by jmc, Thu Apr 8 00:25:10 2004 UTC revision 1.308 by jmc, Sat Jun 12 21:18:11 2004 UTC
# Line 2  $Header$ Line 2  $Header$
2    
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    o faulks upgraded: re-generate output.txt that have changed:
6       global_ocean.cs32x15(.thsice), global_ocean_ebm, lab_sea, natl_box
7    o Added Bryan and Lewis, 1979, vertical diffusivity profile
8    o pkg/land: fix problem in land_impl_temp.F when Ts arround freezing.
9    o added Sadourny discretization of Coriolis
10      - moved some PARAMETERS from mom_*_coriolis.F to PARAMS.h
11      - re-enabled use of omega3 (useAbsVorticity)
12    o added Leith (Phys. Fluids, 1968, 10, 1409-1416) variable viscosity for
13      vector-invarianet equations
14      - note: does *NOT* yet use same variable visc. for no-slip BC's.
15    o recoded the lateral boundary conditions for non-hydrostatic w, this time
16      hopefully without new bugs
17      - still to do: biharmonic friction for non-hydrostatic w
18    o bug fix for mom_*_sidedrag: rA -> rAs,rAw
19    o regenerated output for global_ocean_ebm (using -ieee)
20    o fix mom_common/mom_*_sidedrag.F to recover numeric output prior to creation
21      of mom_common/
22      - simple re-arrangement of instructions within computing loop
23    checkpoint53d_pre
24    
25    checkpoint53c_post
26    o new version of coupler for AIM+thSIce and Ocean models
27     - new fields (SSS,h_MixLayer ...) are exchanged through the coupler
28     - land: change Evaporation of snow
29     - aim with thSIce: fix bug in snow-precip.
30    o changes to calc_gw.F
31     - bug fix for w^2 term near the bottom boundary
32     - (hopefully) improve the lateral slip boundary condtions for use with
33        partial/looped cells
34      - because the bug fix changes two verification experiments anyway (exp5
35        and plume on slope), change the lateral boundary condition from half slip
36        to the value of no_slip_sides
37    o ebm package wasnt quite up to the parallel task. Fixed that.
38    o Adjoint of EBM package + verification
39      * TLM OK
40      * ADM not sufficient accuracy yet (needs further testing)
41    
42    checkpoint53b_post
43    o Commiting new energy balance model to repository
44      * package is pkg/ebm
45      * verif. is verification/global_ocean_ebm
46      * references are in ebm_driver.F
47    C      * X. Wang, P. Stone and J. Marotzke, 1999:
48    C        Global thermohaline circulation. Part I:
49    C        Sensitivity to atmospheric moisture transport.
50    C        J. Climate 12(1), 71-82
51    C      * X. Wang, P. Stone and J. Marotzke, 1999:
52    C        Global thermohaline circulation. Part II:
53    C        Sensitivity with interactive transport.
54    C        J. Climate 12(1), 83-91
55    C      * M. Nakamura, P. Stone and J. Marotzke, 1994:
56    C        Destabilization of the thermohaline circulation
57    C        by atmospheric eddy transports.
58    C        J. Climate 7(12), 1870-1882
59    o Will need long integration testing.
60    checkpoint53b_pre
61    
62    o created pkg/mom_common in preparation for variable viscosity code
63    o renamed and split ini_mnc_io
64    o pkg/land: only liquid water can diffuse or run-off
65    o AIM using land: soil wetness availability account for snow
66    o added printMapIncludesZeros to EEPARMS namelist
67    
68    checkpoint53a_post
69    o restore TAMC compatiility for exf_constants.h
70      (no usage of _d in .h)
71    o Additional storing in KPP in an attempt to fix
72      TAMC problem with adjoint of KPP code.
73      (no success...)
74      Identical code works fine with TAF.
75    o Fixed verification/natl_box_adjoint experiments.
76      Initial conditions for Experiments 4 and 5 are now
77      set to "SEAICE_initialHEFF=0", which is more reasonable,
78      and hence gives results closer to that of Experiment 2.
79      Experiment 6 requires "SEAICE_initialHEFF=1" and is working once again.
80    
81    checkpoint53
82    o stable checkpoint with up to date adjoint
83      TLM tests only run for 1st grdchk at the moment. Its unclear if
84      this is a code problem or a problem with resetting code for g_
85      variables that is being autogenerated wrong.
86      Otherwise:
87       o code is testing well on Linux (P4 and AMD), SGI Alitix and Irix.
88       o IBM and HPQ tests could not be run because NCAR (IBM) and NCCS (HPQ)
89         are both still in chaos following their security messes.
90    
91    checkpoint52n_post
92    o various build (mostly genmake2) changes including:
93      - ability to build/run more easily within Cygwin and MacOS X
94      - more complicated Makefiles with a stronger dependence on Gnu Make
95    o pkg/seaice modifications
96      - added SEAICE_deltaTtherm and SEAICE_deltaTdyn in order to reduce cost
97        of pkg/seaice.  For time being, SEAICE_deltaTtherm = deltaTtracer
98        and SEAICE_deltaTdyn must be integer multiple of SEAICE_deltaTtherm
99      - changed proxy for geostrophic velocity and updated
100        verification/lab_sea/results/* accordingly
101      - removed ADI dynamic solver from pkg/seaice
102      - replaced all occurrences of 1/CSTICE or 1/CSUICE
103        they caused a segmentation fault under certain circumstances
104      - removed unused field WATR
105    o bug fix in exf-package:
106      -  u/vwind are defined at tracer/pressure points. The values of u/vwindmask
107         now reflect that.
108    o small fixes in the cal-package:
109      - set reference date to first of January for the 'model'-calendar
110      - failing of cal_CheckDate in cal_FullDate now actually results in a
111        warning
112    o small modifications in exf-package to increase flexibility:
113      - change climtempfreeze from a constant to a runtime parameter that
114        is specified in data.exf_clim (default = -1.9)
115      - introduce runtime parameter windstressmax (default = 2.0) that is
116        specified in data.exf
117    o fix in pkg/thsice:
118      - update Evap (Tsf changes) to be consistent with Latent heat flux
119      - maintain snow precipitation unchanged (even if Tsf >=0).
120     both affect global_ocean.cs32x15/(.thsice) results ; update output.txt.thsice
121    
122    checkpoint52m_post
123    o commented out call to cal_GetMonthsRec in swfrac.F and added some comments;
124      this does not change any of the results, because myIter=0 in swfrac always
125      lead to jwtype=2 (the default anyway), but the call makes little sense
126      as a default
127    o no SHORTWAVE HEATING lost at the bottom; affects lab_sea output; updated
128  o re-work pkg/thsice interface with ocean & bulk_force pkg to allow  o re-work pkg/thsice interface with ocean & bulk_force pkg to allow
129    atmospheric model (AIM) to use it ; add a "slab ocean" component.    atmospheric model (AIM) to use it ; add a "slab ocean" component.
130  o pkg/aim_v23 : add interface to call thermodynamic sea-ice (thsice)  o pkg/aim_v23 : add interface to call thermodynamic sea-ice (thsice)

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