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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o global_oce_llc90,cs32 : ecco_v4 verification exps now use separate |
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AUTODIFF_OPTIONS.h, CTRL_OPTIONS.h, ECCO_OPTIONS.h rather than |
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ECCO_CPPOPTIONS.h (i.e. replacing the deprecated, circumvoluted, |
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approach where CPP_OPTIONS.h includes an omnipotent |
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ECCO_CPPOPTIONS.h that superseeds pkgs '_OPTIONS.h'). |
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o pkg/ctrl/ctrl_map_ini_genarr.F : include GMREDI_OPTIONS.h where |
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ALLOW_3D_KAPGM, ALLOW_3D_KAPREDI (to be added later) belong. |
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o pkg/seaice/SEAICE_SIZE.h : replace ALLOW_AUTODIFF_TAMC with ALLOW_AUTODIFF |
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to avoid needing AUTODIFF_OPTIONS.h anytime SEAICE_SIZE.h is included |
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(it seems that THSICE_SIZE.h, PTRACERS_SIZE.h have the same issue...) |
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o model/src, pkg/smooth, profiles, salt_plume, seaice, exf, ecco, ctrl : |
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add ECCO_OPTIONS.h, AUTODIFF_OPTIONS.h, CTRL_OPTIONS.h when needed |
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- ECCO_OPTIONS.h is needed when including ecco_cost.h, ecco.h |
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- AUTODIFF_OPTIONS.h is needed when including tamc.h, tamc_keys.h |
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- CTRL_OPTIONS.h is needed when including ctrl.h, optim.h, etc |
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o pkg/ctrl,ecco,exf : |
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- remove variables associated with NON-generic costs, |
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unless ECCO_CTRL_DEPRECATED is defined. |
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- remove NON-generic NON-obcs controls, |
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unless ECCO_CTRL_DEPRECATED is defined. |
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o pkg/ctrl : added ctrl_local_params.h |
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o pkg/ecco : added ecco_local_params.h |
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o verification : added ECCO_CTRL_DEPRECATED to most as and oad |
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experiments, which will progressively be removed once the |
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experiments are revised to use only generic controls/costs. |
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checkpoint65f (2014/10/13) |
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o pkg/ctrl, ecco, seaice : minor changes in headers |
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o global_oce_llc90,cs32 : ecco_v4 verification exps now test generic |
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cost function and control capabilities added since checkpoint65c. |
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o pkg/ctrl: regroup all obcs ctrl variables in CTRL_OBCS.h. |
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o pkg/ecco: increase modularity and improve logic |
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- ecco_toolbox.F (new) : basic operations that are often used, |
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including ecco_zero, ecco_cp, ecco_cprsrl, ecco_diffmsk, |
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ecco_addcost, ecco_add, ecco_div, ecco_readbar. |
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- cost_gencal.F (new) : determine filnames and records. |
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- cost_genread.F, cost_generic.F : condense code using ecco_toolbox. |
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- cost_generic.F : use spzeroloc rather than hard-coded -9999, |
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and exploit the above functions leading to more compact code. |
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- cost_genread.F : rm un-necessary arguments, re-arrange args order. |
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- ecco_check.F, ecco_readparms.F : bring logic up to date (using_tpj, |
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using_ers, using_gfo, using_mdt is now only defined within gencost) |
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o pkg/ecco: extend generic cost capabilities |
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- pkg/ecco : added 3D gencost (ALLOW_GENCOST3D), added gencost |
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capabilities via gencost_preproc (+ _c,_i,_r related params), |
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gencost_posproc (+ _c,_i,_r related params), gencost_nrecperiod, |
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gencost_outputlevel arguments to cost_generic |
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- pkg/ecco/cost_genread.F (new) : interface between cost_generic |
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and active_read, making room for gencost_preproc to take effect. |
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Added preproc code ('climmon') to replace GENERIC_BAR_MONTH. |
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- pkg/ecco/cost_generic.F : |
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compute and store misfit maks*(model-data) in localdif that is |
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then used in cost and for output, output misfit if outlev.GT.0 |
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- pkg/ecco/cost_averagesfields.F : depend on gencost_barskip |
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rather gencost_barfile for deciding whether to write barfile |
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- pkg/ecco/ecco_cost_driver.F : extract call to cost_profiles from cost_hyd |
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- pkg/ecco/ecco_cost_init_fixed.F : extract gencost weights from |
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ecco_cost_weights, re-activate ecco_summary, determine gencost_barskip |
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- pkg/ecco/ecco_summary.F : report gencost variables |
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- pkg/ecco/cost_gencost_customize.F : treat case of scatterometer costs |
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o pkg/sea/SEAICE_OPTIONS.h : add ALLOW_COST_ICE, ALLOW_SEAICE_COST_SMR_AREA |
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o pkg/ecco: internal re-organization |
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- resolve un-necessary dependancies within pkg/ecco and to pkg/ctrl |
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(rm includes of optim.h and ctrl.h, replace optimcycle with eccoiter, |
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mv relevant variables definition from ecco_cost.h to ecco.h, |
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make sure gencost routines only include ecco.h) |
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- throughout : add missing CCP switches, rm unused variables, |
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and rm un-necessary CPP switches |
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- throughout gencost routines : replace modelstartdate with |
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gencost_startdate when needed |
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- cost_bp_read.F : use arguments, instead of common blocs |
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so that it can be used also by (new) cost_gencost_bpv4.F |
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- ecco_init_varia.F : initialize RHOsumGlob_0, VOLsumGlob_0 |
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- ecco_phys.F : compute etanFull |
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- ecco_readparms.F : rename using_topex as using_tpj, add |
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bpv4-grace to gencost list, initialize added parameters |
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- ecco_summary.F : include SIZE.h needed for augmented ecco.h |
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checkpoint65e (2014/09/28) |
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o pkg/obcs: |
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- replaced the just-added CPP options with run-time variables |
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(see pkg/obcs/OBCS_PARAMS.h for details) |
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o pkg/obcs: |
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- add additional CPP options for sponge boundary layers |
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(see pkg/obcs/OBCS_OPTIONS.h for details) |
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o pkg/atm_phys: |
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- implement simple (obliquity only, assuming circular planet orbit) |
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seasonal cycle for incoming insolation ; used when run-time parameter |
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"select_incSW" is set to 1 ; by default (=0), uses old unchanged formula. |
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o pkg/exf, pkg/ecco, pkg/ctrl: |
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- add ctrlUseGen and .NOT.ctrlUseGen exclusive brackets |
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- activate gentim2d for xx_atemp,xx_aqh,xx_swdown,xx_lwdown,xx_precip |
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- implement gentim2d for xx_tauu, xx_tauv |
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o pkg/ctrl, pkg/ecco : |
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- fix and complement the generic controls implementation |
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o pkg/exf/exf_getclim.F, exf_getffields.F, exf_getsurfacefluxes.F, |
o pkg/exf/exf_getclim.F, exf_getffields.F, exf_getsurfacefluxes.F, |
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pkg/shelfice/shelfice_thermodynamics.F, |
pkg/shelfice/shelfice_thermodynamics.F, |
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verification/hs94.1x64x5/code_ad/ctrl_map_gentim2d.F, |
verification/hs94.1x64x5/code_ad/ctrl_map_gentim2d.F, |
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verification/hs94.1x64x5/code_oad/ctrl_map_gentim2d.F : |
verification/hs94.1x64x5/code_oad/ctrl_map_gentim2d.F : |
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- add weight in CTRL_GET_GEN calls |
- add weight in CTRL_GET_GEN calls |
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o pkg/ctrl : |
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- ctrl_get_gen.F : add weight as input parameter, and apply |
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it directly rather than using smooth_correl2Dw (to be retired). |
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- ctrl_map_gentim2d.F : add wgentim2d in CTRL_GET_GEN call |
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o pkg/ctrl : |
o pkg/ctrl : |
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- CTRL_GENARR.h : add xx_gentim2d_numsmooth |
- ctrl_get_gen.F : add weight as input parameter, and apply |
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- ctrl_cost_driver.F : bug fix (iarr, not 1) |
it directly rather than using smooth_correl2Dw (to be retired). |
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- ctrl_init.F : bug fix (missing iarr) |
- ctrl_map_gentim2d.F : add wgentim2d in CTRL_GET_GEN call |
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- ctrl_readparms.F : add xx_gentim2d_numsmooth, improve numsmooth defaults |
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- ctrl_summary.F : improved report of controls settings |
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o pkg/ecco/ecco_cost_final.F : add genarr2d, genarr3d cost contributions |
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o pkg/ctrl : |
o pkg/ctrl : |
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- introduce run time switch ctrlUseGen (in ctrl.h, ctrl_check.F, |
- introduce run time switch ctrlUseGen (in ctrl.h, ctrl_check.F, |
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ctrl_init_variables.F, ctrl_readparms.F, ctrl_summary.F) |
ctrl_init_variables.F, ctrl_readparms.F, ctrl_summary.F) |
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- re-activate ctrl_summary (call in ctrl_init.F) |
- re-activate ctrl_summary (call in ctrl_init.F) |
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o pkg/ctrl/ctrl_cost_gen.F : |
o pkg/ctrl/ctrl_cost_gen.F : |
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- rename ctrl_cost_gen2d input parameters {wmean_gen,wgen,genmask} |
- fix CCP brackets, remove un-necessary myiter, mytime |
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as {xx_gen_wmean,xx_gen_weight,xx_gen_mask} |
o pkg/ecco, pkg/ctrl : |
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- add ctrl_cost_gen3d for ARR3D (ctrl_cost_gen2d is for ARR2D,TIM2D) |
- remove cost_genctrl.F (now pkg/ctrl/ctrl_cost_driver.F) |
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o pkg/ctrl/CTRL_GENARR.h : |
- remove cost_forcing_gen.F (now pkg/ctrl/ctrl_cost_gen2d.F) |
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- add objf_genarr2d, num_genarr2d, mult_genarr2d |
- add ctrl_cost_driver.F (replaces pkg/ecco/cost_genctrl.F) |
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- add objf_genarr3d, num_genarr3d, mult_genarr3d |
- add ctrl_cost_gen2d.F (replaces pkg/ecco/cost_forcing_gen.F) |
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- add wgenarr2d, wgenarr3d |
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o pkg/ctrl/ctrl_readparms.F : |
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- add mult_genarr2d,mult_genarr3d in namelist |
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o pkg/ctrl_map_ini_genarr.F : |
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- bug fixes |
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o pkg/ctrl/ctrl_cost_driver.F : |
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- remove un-necessary cal.h, fix CCP brackets, remove un-necessary |
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myiter, mytime, add return |
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o pkg/ctrl/ctrl_cost_gen.F : |
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- fix CCP brackets, remove un-necessary myiter, mytime |
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o pkg/ecco : |
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- remove cost_genctrl.F (now pkg/ctrl/ctrl_cost_driver.F) |
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- remove cost_forcing_gen.F (now pkg/ctrl/ctrl_cost_gen2d.F) |
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- update cost_forcing_gen calls in cost_forcing.F |
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- update cost_genctrl call in ecco_cost_driver.F |
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- update ecco_ad_diff.list accordingly |
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o pkg/ctrl : |
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- add ctrl_cost_driver.F (replaces pkg/ecco/cost_genctrl.F) |
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- add ctrl_cost_gen2d.F (replaces pkg/ecco/cost_forcing_gen.F) |
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- update ctrl_ad_diff.list accordingly |
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checkpoint65d (2014/09/15) |
checkpoint65d (2014/09/15) |
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o pkg/ctrl/CTRL_GENARR.h, ctrl_readparms.F : |
o pkg/ctrl/CTRL_GENARR.h, ctrl_readparms.F : |