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revision 1.1980 by mlosch, Wed Apr 23 12:42:19 2014 UTC revision 1.1999 by jmc, Sat May 24 13:26:28 2014 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    checkpoint64x (2014/05/24)
8    o verification/lab_sea:
9      - update adjoint and TLM output following changes to pkg/salt_plume
10      - un-do the update after putting back local recip_Cp in few places.
11    o pkg/salt_plume: modifications by An Nguyen:
12      - add capability to do brine rejection (salt-plume) as function of
13        volume+tracers (instead of only salinity tracer).
14      - conserve volume by exchanging volume from each kLev to above to
15        accommodate in-coming brine volume
16      - store surface and klev exchanged fraction + volume in 4 new 3-d arrays
17      - switch KPP surf buoyancy due to brine forcing to 3-d
18        (3 more 3-d arrays, 2 for SPforcing[T,S], 1 for boplume)
19      - add salt_plume_volfrac, salt_plume_apply, salt_plume_tendency_apply_t
20      - unrelatedly, also add ad-hoc capability to vary salt_plume scheme
21        in East/West Arctic.
22    o pkg/sbo:
23      - incorporate modifications from Katherine Quinn to enable the use of sbo
24        pkg in ECCO-v4 set-up ; remove SBO-TimeAve output ; add monitor-like
25        output for future testreport verification (unfinished).
26    o pkg/atm_phys:
27      - change diagnostics (AtPh_Trf & AtPh_Qrf) of DARGAN_BETTSMILLER S/R:
28        skip the reseting of t_ref & q_ref to initial t & q ; this preserve the
29        output of S/R CAPECALCNEW (Parcel temp & q) for diagnostics.
30    o pkg/seaice
31      seaice_calc_ice_strength.F: modify expression to avoid divisions
32        (affects truncation)
33      seaice_do_ridging.F: clean up the insectarium
34      - fix a bug that was compensated by areaScaling (-> remove areaScaling code)
35      - added SEAICEsnowFracRidge to redistributed snow (2nd bug)
36      - set closing/openingRate to zero where no extra iteration is need (3rd bug)
37      - add some debugging information and error messages (warnings)
38    o model/src: modifications relatd to atmosphere p*:
39      - Switch to more accurate p* coordinate slope term (calc_grad_phi_hyd.F)
40      - With p* or Sigma-P, use constant reference Pot.Temp (thetaConst) instead
41        of vertical profile tRef in geopotential background and anomaly.
42      - Acount for true p* correction in theta <-> T conversion in pkg/aim_v23
43        and pkg/atm_phys.
44      - Update FWD output of experiments: aim.5l_cs (x2), fizhi-cs-32x32x40,
45        fizhi-cs-aqualev20, fizhi-gridalt-hs, tutorial_held_suarez_cs, cpl_aim+ocn.
46    o pkg/seaice: fix a bug in seaice_prepare_ridging.F, forgot a sqrt
47    o pkg/ptracers: compute ptracer source/sink due to linear free surface.
48        not used right now, but can be used in BGC packages to fix conservation.
49    o pkg/dic, pkg/gchem: move tracer_meanarea to gchem, so it can be used by
50        other packages too.
51    o pkg/seaice/seaice_calc_ice_strength.F: replace SEAICE_rhoSnow by
52        SEAICE_rhoIce in the Rothrock (1975)-type strength calculations (bug fix)
53    o model/src:
54      - since we have several heat capacity (even in model/src), define "recip_Cp"
55        as local variable (no longer in common block) to avoid any confusion.
56      - add thetaConst in PARAMS.h (to be used with pStar or sigma-P coords).
57    o pkg/exf:
58      - from Jeff Scott: add option (#define EXF_CALC_ATMRHO) to calculate local
59        air density as function of air Temp, Humidity and atm pressure.
60    
61    checkpoint64w (2014/05/02)
62    o verification:
63      - update output_adm.txt files for experiment global_ocean.cs32x15 (seaice &
64        seaice_dynmix) and lab_sea (primary test & noseaicedyn): moving/changing
65        code from seaice_growth.F & seaice_advdiff.F to new ridging routines
66        seaice_reg_ridge.F seaice_do_ridging.F affects AD gradient
67        (down to 8-7 matching digits for global_ocean and 5-6 for lab_sea).
68    o model/src: for atmosphere in p* coords:
69      - store factor rStarFacC**atm_kappa (= pStarFacK) in common block
70      - implement more accurate p* coordinate slope term (in calc_grad_phi_hyd.F),
71        but not yet activated.
72    o pkg/seaice: fix restart problem for ITD with new ice strength parameterisation:
73      - move computation of opnWtrFrac = 1-AREA to before computing ice strength
74      - this changes the results (but not for any verification experiment, because
75        none tests this), but avoids having an extra field in the restart files
76    o pkg/seaice: remove global variable TICE (not needed)
77      - replace by TICES or local variable where necessary (cost_seaice_test,
78        seaice_diagnostics_state)
79      - move copying TICE to TICES from seaice_check_pickup to seaice_read_pickup
80      - use specific read/write routines for reading and writing individual leves
81        of a multilevel field
82    o pkg/ctrl & model/inc:
83      - move additional anomaly fields of control vars (related to options:
84         ALLOW_KAPGM_CONTROL, ALLOW_KAPREDI_CONTROL and ALLOW_BOTTOMDRAG_CONTROL)
85        from DYNVARS.h into new header file: CTRL_FIELDS.h
86    o pkg/seaice: some small modifications to the ridging code
87      - make fw2ObyRidge a global variable and add the freshwater flux to
88        seaice_growth
89      - pass actual thickness from seaice_prepare_ridging, so that it is
90        computed only in one place and compute it in the same way as in
91        seaice_growth
92      - initialise more fields in seaice_do_ridging that where cause floating
93        point exceptions over land
94  o pkg/seaice: preparations for ridging code and first real ridging code  o pkg/seaice: preparations for ridging code and first real ridging code
95    - move most of "PART 1" of S/R seaice_growth into a new and separate    - move most of "PART 1" of S/R seaice_growth into a new and separate
96      S/R seaice_reg_ridge that will both regularize the state variable after      S/R seaice_reg_ridge that will both regularize the state variable after
97      advection call the actual ridging routine;      advection call the actual ridging routine;
98    - requires to make 5 fields global fields: d_HEFFbyNEG,d_HSNWbyNEG,    - requires to make 5 fields global fields: d_HEFFbyNEG,d_HSNWbyNEG,
99      d_AREAbyRLX,d_HEFFbyRLX,saltFluxAdjust;      d_AREAbyRLX,d_HEFFbyRLX,saltFluxAdjust;
100    - remove ridging code from seaice_advdiff    - remove ridging code from seaice_advdiff
101    - clean up remaining part 1 of seaice_growth in an attempt to make it    - clean up remaining part 1 of seaice_growth in an attempt to make it
102      more readable (this is probably subjective)      more readable (this is probably subjective)
103    - call seaice_itd_redist once in the initialisation phase to have the initial    - call seaice_itd_redist once in the initialisation phase to have the initial
104      conditions in the correct category      conditions in the correct category

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