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revision 1.1729 by jmc, Tue Sep 4 01:04:23 2012 UTC revision 1.1739 by jmc, Tue Sep 18 21:26:19 2012 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/obcs:
8      - change default setting of OBCS_UVICE_OLD from defined to undef;
9      - use new parameter OB_indexNone for null index value (instead of hard-coded 0)
10        in all pkg/obcs code and in other pkgs; remove k loop in obcs_check_depths.F;
11      - pass OB_indexNone as (new) argument to S/R CTRL_MASK_SET_[X,Y]Z;
12      - change OB null index value (OB_indexNone) to -99 ; this fix the problem
13        with Southern & Western OB at a tile edge (at least in a simple set-up).
14    o pkg/obcs:
15      - change settings of OB index in case OB coincides with tile edge (shared by
16        2 tiles), so that common OB location is registered by both tiles (instead of
17        only 1). However, for Southern and Western OB, index value = 0 is not
18        recognized as valid OB index (=default null value) and needs to be fixed.
19      - modify accordingly OBCS_BALANCE_FLOW and OBCS_MONITOR (avoid double counting)
20      - new parameter "OB_indexNone" for null index value (for now, still zero)
21        to replace hard-coded null index value of zero.
22    o pkg/exch2:
23      - improve W2_USE_E2_SAFEMODE (faster) and W2_E2_DEBUG_ON:
24        always check buffer-size (but outside the loop); move checking for valid
25        index from W2_USE_E2_SAFEMODE to W2_E2_DEBUG_ON; in W2_E2_DEBUG_ON,
26        print each tile and point connection only if |W2_printMsg|>= 2 and 3.
27    o pkg/ctrl (pack & unpack):
28      - in ctrl_pack.F & ctrl_unpack.F, use the same local file-name variable
29        (locally defined) for different variables (+ remove the variable-specific
30        file name in CTRL_GENARR.h). For now, only implemented for GENARR2/3D_CONTROL
31        (to be extended to other local file names in ctrl.h).
32    o pkg/flt:
33      - add a FLT_Iter0 option (similar to PTRACERS_Iter0).
34    o pkg/mdsio:
35      - fix missing STOP in mdsio_readvec_loc.F (case ioUnit=0) when file is missing
36    o tools/genmake2:
37      - add similar dependences for target EXE_AD & EXE_FTL as we have for EXECUTABLE
38        (added by Alistair in version 1.51 for building without make depend);
39      - remove Header files list (H_SRC_FILES) from the dependence of targets
40         ad_input_code.f & ftl_input_code.f (not clear why it was added in the first
41        place in version 1.23): this save going through staf when unrelated header
42        file has been modified.
43       Note: for an intermediate target (e.g., ad_input_code.f or adtaf) without
44        "make depend" step, still need to do "make links" before "make adtaf".
45    o eesupp/src (+ few pkg src files) & genmake2:
46      - finish to remove ALWAYS_USE_MPI in source code that TAF does not see;
47      - no longer set ALWAYS_USE_MPI in Makefile (was done by genmake2).
48      - improve genmake2 checking for ALLOW_${PKG} in CPP_OPTIONS.h files (distinguish
49         upper/lower case ; account for space between "#" and undef/define)
50    o pkg/flt (with exch2):
51      - cleaning: fix so that it compiles; move remaining MPI calls out of flt_exch2.F;
52      - simplify threads synchronisation; fix (many issues) multi-threaded with MPI.
53    
54    checkpoint63s (2012/09/05)
55    o pkg/ecco:
56      - remove #ifdef ALLOW_SMOOTH_CORREL3D brackets.
57      - add more relevant #ifdef ALLOW_SMOOTH ones.
58      - sort out useAtmWind, useSMOOTH, ctrlSmoothCorrel2D.
59    o pkg/ctrl:
60      - CTRL_OPTIONS.h : document CPPs related to smoothing; ALLOW_SMOOTH_CORREL2D/3D,
61        ALLOW_CTRL_SMOOTH, ALLOW_SMOOTH_CTRL2D, ALLOW_SMOOTH_CTRL3D.
62      - ctrl.h : document run time params doInitXX, doMainPack, doMainUnpack, doPackDiag,
63        doSinglePrecTapelev (audodiff param!), ctrlSmoothCorrel2D (new) and
64        ctrlSmoothCorrel3D (new).
65        The added ctrlSmoothCorrel2D/3D replace the old ALLOW_SMOOTH_CORREL2D/3D CPP.
66      - ctrl_readparms.F : initialise ctrlSmoothCorrel2D/3D and read from namelist.
67      - ctrl_init.F ctrl_pack.F ctrl_unpack.F : switch off ustress/vstress
68        controls when useAtmWind, and vice versa.
69      - ctrl_map_ini_ecco.F : UVEL0, VVEL0, edtaux, edtauy cannot be smoothed as tracers.
70      - ctrl_get_gen.F : replace #ifdef ALLOW_SMOOTH_CORREL2D with
71          #ifdef ALLOW_SMOOTH, IF ctrlSmoothCorrel2D, IF useSMOOTH.
72      - ctrl_map_ini_gen.F : replace #ifdef ALLOW_SMOOTH_CORREL3D with
73          #ifdef ALLOW_SMOOTH, IF ctrlSmoothCorrel3D, IF useSMOOTH.
74      - ctrl_set_pack_xy[z].F, ctrl_set_unpack_xy[z].F:
75        replace ALLOW_SMOOTH_CORREL2D/3D brackets with ctrlSmoothCorrel2D/3D.
76    o pkg/smooth:
77      - remove un-necessary includes.
78      - remove ALLOW_SMOOTH*D and ALLOW_SMOOTH_CORREL*D brakets.
79        Those CPP options were never defined, and not necessary.
80    o model/src:
81      - fix CPP brackets in ini_mixing.F (GM_background_K belongs to gmredi).
82      - standard treatment of useSMOOTH.
83    o pkg/autodiff:
84      - add LOGICAL useGGL90inAdMode, useGGL90inFwdMode, useSALT_PLUMEinAdMode,
85        useSALT_PLUMEInFwdMode allowing to switch off ggl90 and salt_plume adjoint.
86  o pkg/exch2:  o pkg/exch2:
87    - add "if usingMPI" where it was missing (in exch2_rx?_cube*.template)    - add "if usingMPI" where it was missing (in exch2_rx?_cube*.template)
88      + to remove ALWAYS_USE_MPI in source code that TAF does not see.      + start to remove ALWAYS_USE_MPI in source code that TAF does not see.
89    - make new S/R W2_MAP_PROCS out of w2_eeboot.F to setup exch2 CommonFlag    - make new S/R W2_MAP_PROCS out of w2_eeboot.F to setup exch2 CommonFlag
90      and tiles to process mapping.      and tiles to process mapping.
91    - re-arrange 3 header files (W2_EXCH2_PARAMS.h, _BUFFER.h & _TOPOLOGY.h)    - re-arrange 3 header files (W2_EXCH2_PARAMS.h, _BUFFER.h & _TOPOLOGY.h)
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