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revision 1.145 by heimbach, Fri Mar 21 23:20:36 2003 UTC revision 1.173 by jmc, Thu Jul 31 18:46:24 2003 UTC
# Line 3  $Header$ Line 3  $Header$
3      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
4      ==============================      ==============================
5    
6    o land pkg: read initial state from files.
7    o AIM : add stratospheric drag in the upper level
8    
9    checkpoint51d_post
10    o change function ILNBLNK (=> last non-blank char.) to return zero
11      (instead of the string length) when the string. char is empty
12    o fix bug in dxV,dyU definition of cubed-sphere grid (ini_curvilinear_grid)
13    o modif's to restore TAMC compatibility
14      - avoid "_d" constructs in PARAMETER declarations
15      - avoid interrupting lines by comment lines
16    o Use cluster local disks for purely local I/O
17      vs. globally visible disks needed for ctrl stuff
18      (merged from ecco-branch)
19      - new active_file_loc... and mdsio_..._loc routines
20      - affected packages: autodiff, ctrl, grdchk, mdsio
21    
22    checkpoint51c_post
23    o introducing integer flag debugLevel
24      - debLevZero: suppress all output
25      - debLevA: standard
26      - debLevB: equivalent to current debugMode=.TRUE.
27    o introducing pathname variable mdsioLocalDir for mdsio
28      that can be specified at runtime
29      (relevant for cluster I/O to local disk)
30    `
31    >>>checkpoint51b_post
32    adjoint of ptracers
33    o disentangled ALLOW_PTRACERS using new ALLOW_GCHEM
34    o extended state in checkpoint_lev?, etc.
35    o alternative ctrl/cost with tr1 or ptracer
36    o new comlev1_bibj_ptracers
37    o new ptracers.flow
38    o made ptracers_forcing same as external_forcing_s
39    o added verification for adjoint with ptracers
40      - adm. grdchk fail so far
41      - tlm. grdchk OK
42      - checked tapelev/comlev recomputations: OK
43    <<<checkpoint51b_pre
44    
45    checkpoint51a_post
46    o added code for biogeochemistry package
47      - new pkgs: dic, gchem
48      - new subroutine in ptracers
49    o modify code for biogeo packages
50      - in model/src and pkg/ptracers
51    
52    checkpoint51
53    o merged improved packages from ecco-branch (ecco_c51_e34) to MAIN
54      - autodiff, ctrl, exf, grdchk, seaice
55      kept separate packages
56      - cost, ecco, obcs
57    o updating verification/internal_wave, verification/lab_sea
58      (all verif's pass on faulks.lcs.mit.edu RH7.3, g77)
59    
60    checkpoint50i_post
61    o Preparing next differentiable checkpoint and sync
62      of MAIN vs. ecco-branch
63      - 1st step: this one is differentiable
64      - 2nd step: next(! not this) checkpoint will have updated packages
65                  from ecco-branch)
66    
67    checkpoint50h_post
68    o new package "land": provide surface BC for AIM.
69    o pkg/ptracers: apply exchange to all tracers after reading a pickup.
70    o AIM: use true log-P extrapolation for near surface temp (= as in
71        F.Molteni paper) ; update aim.5l_cs output.
72    o New variable in PARM03 for more flexible pickups
73    o somewhat cleaned package initialisation sequence for
74      ctrl/ cost/ ecco/ in packages_... routines
75    
76    checkpoint50g_post
77    o merged with release1_p17 (pkg/seaice and verification/lab_sea)
78      - added SEAICE_MULTILEVEL for 8-category sea-ice thermodynamics
79      - LSR sea-ice dynamic solver moved to SouthWest B-grid location and
80        made the default because of faster convergence than ADI
81    
82    checkpoint50f_post
83    o exf totally restructured
84      - replaced all exf_set_ routines by one generic exf_set_gen.F
85        and made sure it's still differentiable
86      - split exf_getffields.F into new exf_bulkformulae.F
87      - exf_inscal_/exf_outscal_ suffixes consistent with field names
88      - updated adjoint/makefile and relevant verif. accordingly
89    
90    checkpoint50f_pre
91     o AIM: near surface temp evaluated from Pot.Temp: fixed for Part Cell ;
92          + change Evap over land. (update aim.5l_cs output)
93     o added missing .cvsignores and made uniform across expts
94     o changed configuration of tidal_basin_2d expt
95     o added pkg/debug functions for tracing code in fatal crashes
96     o tidied pkg/monitor to use MONITOR_OPTIONS.h
97     o new fn in pkg/monitor to stop model if solution grows too big
98     o removed lots of single quotes from comments
99    
100    checkpoint50e_post
101    o make KPP work with PTRACERS
102     - fix gad_calc_rhs to call new routine kpp_transport_ptr, which is
103       nearly a copy of kpp_transport_s
104     - there is no analogue to SurfaceTendencyS, so I have to use
105       gPtr(of the surface layer) instead
106    o add a new platform SunFire+mpi (SunFire 15000) to genmake
107    checkpoint50e_pre
108    
109    checkpoint50d_post
110    o change kpp output from multiple-record state files to single-record state
111      files analogous to write_state.F
112    o reduce the output frequency of cg3d-related stuff to the monitor frequency,
113      analogous to the cg2d-related output.
114    o fix small problem with in ptracers_write_checkpoint.F: len(suff)=512,
115      so that writing to internal file fn (with length 512) fails.
116    checkpoint50d_pre
117    
118    checkpoint50c_post
119    o fix problem in ini_procs.F when using MPI (was there since checkpoint48f)
120    o add monitor diagnostic of vorticity (mon_vort3.F) and potential energy.
121    o add time-average diagnostic of U*V and vertical diffusive flux for theta.
122    o bug fixed in convective adjustment diagnostic (multi-tile set-up).
123    o 4th Order Adv scheme: return to previous (c40pre7) masking near boundaries.
124    
125    checkpoint50c_pre
126    Merging from release1_p13:
127    o bug fix for pkg/seaice dynamic solver
128    o Added SEAICE_initialHEFF to pkg/seaice
129    
130    checkpoint50b_post
131    o store u*,v* in gU,V instead of in guNm1,gvNm1
132    o in order to put the momForcing out of the Adams-Bashforth:
133      move forcing & CD-scheme calls from mom_fluxform & mom_vecinv
134      to timestep.F
135    o new flag "useCDscheme" (default=F); replace guCD,gvCD by local arrays
136    o re-generate output for highly sensitive test-exp:
137       global_ocean_pressure, ideal_2D_oce, lab_sea, natl_box
138    
139    checkpoint50b_pre
140    o restore the use of momAdvection & useCoriolis flags (mom_vecinv)
141    o corrected CPP option mismatch in exf_Bulk... functions for case
142      #define ALLOW_ATM_WIND && #undef ALLOW_ATM_TEMP
143    
144  checkpoint50a_post  checkpoint50a_post
145  o Bug fix for merging between c50 and KPP.  o Bug fix for merging between c50 and KPP.
146    ikey was passed from thermodynamics to kpp_calc via    ikey was passed from thermodynamics to kpp_calc via

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