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revision 1.1045 by mlosch, Wed Nov 26 15:27:02 2008 UTC revision 1.1066 by heimbach, Fri Feb 13 17:17:58 2009 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    checkpoint61i
8    o autodiff:
9      fix autodiff_sore/_restore indices for obcs
10      (spotted by I. Hoteit, M. Mazloff)
11    o pkg/autodiff, pkg/ctrl:
12      Add flag to reduce all tapelev I/O to single-prec.
13      In data.ctrl set
14        doSinglePrecTapelev = .TRUE.
15    o model/src/ini_curvilinear_grid.F: check in hack for SX8 compiler
16      to make sure that recip_dxV and recip_dyU are never zero, until we
17      have a proper exchange for them. Most compilers do not seem
18      to mind divisions by zero in the overlaps, as long as the results are
19      not used anywhere, but sxf90 does.
20    o pkg/shelfice: fix bug with SHELFICEconserve flag, prepare for
21      real fresh water flux (not yet)
22    o pkg/mdsio & rw:
23     - add argument & option to S/R MDS_WRITEVEC_LOC (avoid Open/Close & write-meta)
24     - add simple interface S/R to MDS_WRITEVEC_LOC in pkg/rw: WRITE_GLVEC_RX.
25    o pkg/flt:
26     - replace FLT_INIT by 3-steps standard initialization S/R: readparms,
27       init_fixed & ini_varia.
28     - clean-up & simplify linear interpolation S/R:
29       move flt_bilinear.F -> flt_interp_linear.F ; add arg. myThid.
30     - fix some indices (mainly vertical index) ; add IMPLICIT NONE.
31     - more efficient I/O, using new options of MDS_WRITEVEC_LOC S/R.
32     - add vert. coordinate & horiz. indices to output files.
33     - change vertical position in initial condition, from index to depth [m].
34     - store horizontal (decimal) indices i,j in common block (instead of coord. x,y)
35       (easier to get to a curvilinear grid) ; delX,delY no longer used.
36    o pkg/ggl90: a few modifications:
37     - fix bottom boundary condition, and interpolation of KappaE
38       near top and bottom
39     - use same set of viscosity/diffusivity for TKE/momnetum/tracer
40     - add smoothing option as in Blanke and Delecluse (1993) (--> ALLOW_GGL90_SMOOTH)
41     - add a few options for mixing-length upper limit (--> mxlMaxFlag)  
42    o rename thetaMin,phiMin -> xgOrigin,ygOrigin
43      (maintain temporary backward compatibility, until next checkpoint)
44    
45    checkpoint61h
46    o pkg/diagnostics with "periodic averaging diagnostics":
47      fix S/R DIAGNOSTICS_COUNT ; hack diagnostics_out.F to get NetCDF output.
48    o pkg/my82: add missing "_d 0" ; update output of exp. vermix.my82
49    o pkg/obcs: fix loop ranges for balancing code
50    o pkg/flt:
51     - improve criteria for finding which tile owns a float.
52     - fix FLT_EXCH for case without MPI ; apply cyclic BC + fix also the MPI case.
53    o Add well-mixed CO2 box in aim_v23 (which includes changes in pkg
54      aim_compon_interf, ocn_compon_interf, gchem, and dic to get coupling
55      with ocean biogeo)
56    o pkg/flt:
57     - do some cleaning and fix the restart ;
58     - add output.txt in flt_example/results to get this pkg tested.
59    o genmake2: add an EXTENDED_SRC option and flag.
60       for now, cannot be turned on on command line (only through genmake_local)
61    o pkg/mdsio: read/write vector:
62     - singleCpuIO: fix RL/RS in MDSWRITEVECTOR by calling new S/R MDS_BUFFERtoRL/RS
63     - singleCpuIO=F: fix arrType & filePrec & _BYTESWAPIO in both MDSREADVECTOR
64       & MDSWRITEVECTOR by calling new S/R MDS_RD/WR_VEC_RL/RS.
65     - affects gradient of test-exp "bottom_ctrl_5x5" (not due to _BYTESWAPIO)
66      (drop to 4 digits matching for grad). But this test does not look very
67      reliable (was already failling on eddy, fc5, at 6.digits). Update output.
68    
69    checkpoint61g
70    o pkg/flt:
71      - move FLT_CPPOPTIONS.h to FLT_OPTIONS.h (standard name)
72       + make OPTIONS file more standard.
73      - rename S/R MDSREADVECTOR_FLT to FLT_MDSREADVECTOR (to mach src file name)
74      - fix _BYTESWAPIO CPP-Flag
75      - standard reading of file-parameter "data.flt"
76      - fix argument list of S/R FLT_RESTART
77      still need to fix _BYTESWAPIO in pkg/mdsio/mdsio_writevector.F
78  o pkg/obcs: fix a CPP-flag, bug reported by Jeff Blundell  o pkg/obcs: fix a CPP-flag, bug reported by Jeff Blundell
79  o gather_2d.F/scatter_2d.F: suppress vectorisation on NEC SX in respond to  o gather_2d.F/scatter_2d.F: suppress vectorisation on NEC SX in respond to
80    a still unfixed compiler/optimization bug    a still unfixed compiler/optimization bug

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