--- MITgcm/doc/tag-index 2002/05/14 20:42:45 1.53.2.5 +++ MITgcm/doc/tag-index 2003/02/25 06:34:57 1.53.2.31 @@ -1,10 +1,184 @@ -$Header: /home/ubuntu/mnt/e9_copy/MITgcm/doc/tag-index,v 1.53.2.5 2002/05/14 20:42:45 heimbach Exp $ +$Header: /home/ubuntu/mnt/e9_copy/MITgcm/doc/tag-index,v 1.53.2.31 2003/02/25 06:34:57 dimitri Exp $ Notes on tags used in MITgcmUV ============================== -next patch: +untagged +o Added net flux to downward flux conversion to pkg/exf/exf_getffields.F +o Added SEAICE_initialHEFF to pkg/seaice + +release1_p12 +o Added missing /* */ to CPP comments in pkg/seaice, pkg/exf, + kpp_transport_t.F, forward_step.F, and the_main_loop.F +o pkg/seaice: + - adjoint-friendly modifications + - added a SEAICE_WRITE_PICKUP at end of the_model_main.F + +release1_p12_pre +o Updated useSingleCpuIO option in mdsio_writefield.F to + work with multi-field files, e.g., for single-file pickup. +o pkg/seaice: + - bug fix in growth.F: QNET for no shortwave case + - added HeffFile for specifying initial sea-ice thickness + - changed SEAICE_EXTERNAL_FLUXES wind stress implementation + +release1_p11 +o Modifications for using pkg/exf with pkg/seaice + - improved description of the various forcing configurations + - added basic radiation bulk formulae to pkg/exf + - units/sign fix for evap computation in exf_getffields.F + - updated verification/global_with_exf/results/output.txt +o Added pkg/sbo for computing IERS Special Bureau for the Oceans + (SBO) core products, including oceanic mass, center-of-mass, + angular, and bottom pressure (see pkg/sbo/README.sbo). +o Lower bound for viscosity/diffusivity in pkg/kpp/kpp_routines.F + to avoid negative values in shallow regions. + - updated verification/natl_box/results/output.txt + - updated verification/lab_sea/results/output.txt +o MPI gather, scatter: eesupp/src/gather_2d.F and scatter_2d.F +o Added useSingleCpuIO option (see PARAMS.h). + +release1_p10 +o modifications for using pkg/exf with pkg/seaice + - pkg/seaice CPP options SEAICE_EXTERNAL_FORCING + and SEAICE_EXTERNAL_FLUXES + - pkg/exf CPP options EXF_READ_EVAP and + EXF_NO_BULK_COMPUTATIONS + - usage examples are Experiments 8 and 9 in + verification/lab_sea/README + - verification/lab_sea default experiment now uses + pkg/gmredi, pkg/kpp, pkg/seaice, and pkg/exf + +release1_p9 +o pkg/seaice + - removed GOTO's and added taf directives + - double precision constants to reduce the g77 (Linux) + to F77 (SGI) differences reported in release1_p8 +o tools/genmake + - added SGI options +o verification/testscript + - updated to that of checkpoint47a_post +o verification/global_ocean.90x40x15/input/eedata + - modified for SGI f77 compatibility +o verification/lab_sea + - added description of sea-ice model + - added missing matlab routines + - added test of thermodynamics parallelization + +release1_p8 +o verification/natl_box: + updating new external_fields_load routine +o New package: pkg/seaice + Sea ice model by D. Menemenlis (JPL) and Jinlun Zhang (Seattle). + The sea-ice code is based on Hibler (1979-1980). + Two sea-ice dynamic solvers, ADI and LSR, are included. + In addition to computing prognostic sea-ice variables and diagnosing + the forcing/external data fields that drive the ocean model, + SEAICE_MODEL also sets theta to the freezing point under sea-ice. + The implied surface heat flux is then stored in variable + surfaceTendencyTice, which is needed by KPP package (kpp_calc.F and + kpp_transport_t.F) to diagnose surface buoyancy fluxes and for the + non-local transport term. Because this call precedes model + thermodynamics, temperature under sea-ice may not be "exactly" at + the freezing point by the time theta is dumped or time-averaged. + N.B.: fairly large differences in accuracy occur across + different platforms/compilers; comparison between + g77 (Linux) and F77 (SGI Origin 2000/MIPSpro) + generated output gives: + T S U V + C D M c m s m s m s m s + n p a R g m m e . m m e . m m e . m m e . + f n k u 2 i a a d i a a d i a a d i a a d + g d e n d n x n . n x n . n x n . n x n . + + Y Y Y Y 5 5 7 7 7 8 10 9 6 6 6 6 7 5 7 5 7 FAIL lab_sea + +release1_p7 +o GAD: + - generated new common blocks to account for call of + same gad routines with differing traceridentities + (needed to modify tracerIdentity indices in GAD.h) + - generated separate common blocks for case useCubedSphereExchange + (Department of Futurology) + - parameter lists to gmredi_?transport: added tracerIdentity + - added new key indices to tamc.h +o external_fields_load: + - added this routine to TAF list + - needed to make some common blocks global and additional storing + along the same lines as exf package (checkpoint_lev?_directives.h) +o exf: + updated external forcing package + - bug fixes carried over from ecco-branch + (missing OBCS_OPTIONS.h in two routines) + - enable easy to use "no forcing". + - added exf I/O for atmospheric loading + - added exf I/O for runoff data + - transfered scaling between exf <-> MITgcm to exf namelist +o Adding new verification experiment global_with_exf. + This verification experiment is almost identical to the + global_ocean.90x40x15 experiment, except that it uses + the exf (and cal) package instead of the + external_fields_load routine (cf README file). + +release1_p6 +o fixed the verification/global_ocean.90x40x15 experiment: + - new bathymetry (the world according to A., JMC, and M.) + - new initial fields and forcing fields (*.bin files) + - new POLY3.COEFFS (for the next release one should switch to a full + equation of state) + - fixed several errors and redundancies in the data file + - experiment uses looped cells + - added matlab directory with diagnostic scripts for plotting of output + +release1_p5 +o import recent fix from MAIN branch: + - use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S + - change phiMin in exp1 (to agree with documentation) + from checkpoint45 to checkpoint45a_post: + - specific exchange for X-slice domain (case Ny=1) + - argument futureIter of S/R obcs_calc missing in + exp4 & internal_wave /code + - solve_for_pressure : set cg2d_x to zero where OBCS are applied + from checkpoint44f_post to checkpoint44g_post: + - fix surface correction term in multiDimAdvection + (affects plume_on_slope results +o bug fix in packages_readparms (missing ALLOW_CALENDAR) +o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM +o Adjoint-related bug fixes in kpp: + - kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix + - kpp_routines: store of Rib avoids partial recomputation bug of TAF. +o added Eliassen-Palm flux hooks (dynamics,ini_fields) +o removed unused TAF keys iikey, idkey (dynamics,thermodynamics) +o flow directives: + - new for S/R do_the_model_io + - enhanced for S/R checkpoint +o added Eliassen Palm flux controls to gradient check package +o new ctrl package + - adopted from ECCO environment to enable optimization + - added Eliassen Palm fluxes to controls + - adjusted global_ocean.90x40x15/ and carbon/ accordingly + +release1_p4 +o Removed f90 comments ("!") +o Modified initialisations to enable exf package for MITgcm + (without invoking ECCO_PACKAGE). +o modifications to gradient check package (Martin Losch) + - enable centered differences + - modified format of standard output + +release1_p3 o added tangent linear setup to verification/carbon/ +o added adjoint sensitivity setup to verification/global_ocean... +o moved packages_init_variables before convective_adjustment +o output of verif. which use GMRedi brought up-to-date with + MAIN trunk (those were re-created after changes in GMRedi) +o included CPP option SINGLE_LAYER_MODE + to configure barotropic setup (Martin Losch). +o Removed auxiliary variable in impldiff + (caused numerical differences with MAIN trunk routine). +o Introduced CPP option ALLOW_AUTODIFF_MONITOR to + disable adcommon.h/g_common.h by default. +o Cleaned exchange calls in cg2d. release1_p2 o fixed array boundary problem for adjoint