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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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next patch: |
untagged |
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o Added missing /* */ to CPP comments in pkg/seaice, pkg/exf, |
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kpp_transport_t.F, forward_step.F, and the_main_loop.F |
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o pkg/seaice: |
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- adjoint-friendly modifications |
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release1_p12_pre |
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o Updated useSingleCpuIO option in mdsio_writefield.F to |
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work with multi-field files, e.g., for single-file pickup. |
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o pkg/seaice: |
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- bug fix in growth.F: QNET for no shortwave case |
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- added HeffFile for specifying initial sea-ice thickness |
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- changed SEAICE_EXTERNAL_FLUXES wind stress implementation |
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release1_p11 |
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o Modifications for using pkg/exf with pkg/seaice |
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- improved description of the various forcing configurations |
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- added basic radiation bulk formulae to pkg/exf |
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- units/sign fix for evap computation in exf_getffields.F |
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- updated verification/global_with_exf/results/output.txt |
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o Added pkg/sbo for computing IERS Special Bureau for the Oceans |
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(SBO) core products, including oceanic mass, center-of-mass, |
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angular, and bottom pressure (see pkg/sbo/README.sbo). |
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o Lower bound for viscosity/diffusivity in pkg/kpp/kpp_routines.F |
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to avoid negative values in shallow regions. |
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- updated verification/natl_box/results/output.txt |
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- updated verification/lab_sea/results/output.txt |
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o MPI gather, scatter: eesupp/src/gather_2d.F and scatter_2d.F |
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o Added useSingleCpuIO option (see PARAMS.h). |
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release1_p10 |
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o modifications for using pkg/exf with pkg/seaice |
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- pkg/seaice CPP options SEAICE_EXTERNAL_FORCING |
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and SEAICE_EXTERNAL_FLUXES |
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- pkg/exf CPP options EXF_READ_EVAP and |
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EXF_NO_BULK_COMPUTATIONS |
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- usage examples are Experiments 8 and 9 in |
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verification/lab_sea/README |
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- verification/lab_sea default experiment now uses |
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pkg/gmredi, pkg/kpp, pkg/seaice, and pkg/exf |
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release1_p9 |
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o pkg/seaice |
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- removed GOTO's and added taf directives |
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- double precision constants to reduce the g77 (Linux) |
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to F77 (SGI) differences reported in release1_p8 |
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o tools/genmake |
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- added SGI options |
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o verification/testscript |
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- updated to that of checkpoint47a_post |
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o verification/global_ocean.90x40x15/input/eedata |
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- modified for SGI f77 compatibility |
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o verification/lab_sea |
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- added description of sea-ice model |
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- added missing matlab routines |
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- added test of thermodynamics parallelization |
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release1_p8 |
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o verification/natl_box: |
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updating new external_fields_load routine |
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o New package: pkg/seaice |
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Sea ice model by D. Menemenlis (JPL) and Jinlun Zhang (Seattle). |
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The sea-ice code is based on Hibler (1979-1980). |
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Two sea-ice dynamic solvers, ADI and LSR, are included. |
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In addition to computing prognostic sea-ice variables and diagnosing |
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the forcing/external data fields that drive the ocean model, |
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SEAICE_MODEL also sets theta to the freezing point under sea-ice. |
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The implied surface heat flux is then stored in variable |
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surfaceTendencyTice, which is needed by KPP package (kpp_calc.F and |
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kpp_transport_t.F) to diagnose surface buoyancy fluxes and for the |
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non-local transport term. Because this call precedes model |
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thermodynamics, temperature under sea-ice may not be "exactly" at |
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the freezing point by the time theta is dumped or time-averaged. |
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N.B.: fairly large differences in accuracy occur across |
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different platforms/compilers; comparison between |
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g77 (Linux) and F77 (SGI Origin 2000/MIPSpro) |
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generated output gives: |
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T S U V |
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C D M c m s m s m s m s |
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n p a R g m m e . m m e . m m e . m m e . |
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f n k u 2 i a a d i a a d i a a d i a a d |
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g d e n d n x n . n x n . n x n . n x n . |
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Y Y Y Y 5 5 7 7 7 8 10 9 6 6 6 6 7 5 7 5 7 FAIL lab_sea |
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release1_p7 |
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o GAD: |
| 93 |
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- generated new common blocks to account for call of |
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same gad routines with differing traceridentities |
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(needed to modify tracerIdentity indices in GAD.h) |
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- generated separate common blocks for case useCubedSphereExchange |
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(Department of Futurology) |
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- parameter lists to gmredi_?transport: added tracerIdentity |
| 99 |
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- added new key indices to tamc.h |
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o external_fields_load: |
| 101 |
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- added this routine to TAF list |
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- needed to make some common blocks global and additional storing |
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along the same lines as exf package (checkpoint_lev?_directives.h) |
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o exf: |
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updated external forcing package |
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- bug fixes carried over from ecco-branch |
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(missing OBCS_OPTIONS.h in two routines) |
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- enable easy to use "no forcing". |
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- added exf I/O for atmospheric loading |
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- added exf I/O for runoff data |
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- transfered scaling between exf <-> MITgcm to exf namelist |
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o Adding new verification experiment global_with_exf. |
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This verification experiment is almost identical to the |
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global_ocean.90x40x15 experiment, except that it uses |
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the exf (and cal) package instead of the |
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external_fields_load routine (cf README file). |
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release1_p6 |
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o fixed the verification/global_ocean.90x40x15 experiment: |
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- new bathymetry (the world according to A., JMC, and M.) |
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- new initial fields and forcing fields (*.bin files) |
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- new POLY3.COEFFS (for the next release one should switch to a full |
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equation of state) |
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- fixed several errors and redundancies in the data file |
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- experiment uses looped cells |
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- added matlab directory with diagnostic scripts for plotting of output |
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release1_p5 |
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o import recent fix from MAIN branch: |
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- use recip_dx*,recip_dy* instead of /dx*,/dy* in orlanski_E,W,N,S |
| 131 |
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- change phiMin in exp1 (to agree with documentation) |
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from checkpoint45 to checkpoint45a_post: |
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- specific exchange for X-slice domain (case Ny=1) |
| 134 |
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- argument futureIter of S/R obcs_calc missing in |
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exp4 & internal_wave /code |
| 136 |
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- solve_for_pressure : set cg2d_x to zero where OBCS are applied |
| 137 |
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from checkpoint44f_post to checkpoint44g_post: |
| 138 |
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- fix surface correction term in multiDimAdvection |
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(affects plume_on_slope results |
| 140 |
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o bug fix in packages_readparms (missing ALLOW_CALENDAR) |
| 141 |
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o bug fix in CG2D.h (correct array size for LETS_MAKE_JAM |
| 142 |
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o Adjoint-related bug fixes in kpp: |
| 143 |
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- kpp_calc: sore of kpphbl avoids recomputation/call to S/R kppmix |
| 144 |
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- kpp_routines: store of Rib avoids partial recomputation bug of TAF. |
| 145 |
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o added Eliassen-Palm flux hooks (dynamics,ini_fields) |
| 146 |
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o removed unused TAF keys iikey, idkey (dynamics,thermodynamics) |
| 147 |
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o flow directives: |
| 148 |
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- new for S/R do_the_model_io |
| 149 |
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- enhanced for S/R checkpoint |
| 150 |
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o added Eliassen Palm flux controls to gradient check package |
| 151 |
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o new ctrl package |
| 152 |
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- adopted from ECCO environment to enable optimization |
| 153 |
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- added Eliassen Palm fluxes to controls |
| 154 |
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- adjusted global_ocean.90x40x15/ and carbon/ accordingly |
| 155 |
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release1_p4 |
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o Removed f90 comments ("!") |
| 158 |
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o Modified initialisations to enable exf package for MITgcm |
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(without invoking ECCO_PACKAGE). |
| 160 |
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o modifications to gradient check package (Martin Losch) |
| 161 |
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- enable centered differences |
| 162 |
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- modified format of standard output |
| 163 |
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release1_p3 |
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o added tangent linear setup to verification/carbon/ |
o added tangent linear setup to verification/carbon/ |
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o added adjoint sensitivity setup to verification/global_ocean... |
| 167 |
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o moved packages_init_variables before convective_adjustment |
| 168 |
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o output of verif. which use GMRedi brought up-to-date with |
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MAIN trunk (those were re-created after changes in GMRedi) |
| 170 |
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o included CPP option SINGLE_LAYER_MODE |
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to configure barotropic setup (Martin Losch). |
| 172 |
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o Removed auxiliary variable in impldiff |
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(caused numerical differences with MAIN trunk routine). |
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o Introduced CPP option ALLOW_AUTODIFF_MONITOR to |
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disable adcommon.h/g_common.h by default. |
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o Cleaned exchange calls in cg2d. |
| 177 |
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release1_p2 |
release1_p2 |
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o fixed array boundary problem for adjoint |
o fixed array boundary problem for adjoint |
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