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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o vertical mixing schemes: |
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- remove unused S/R CALC_BUOYANCY (left from branch-atmos merging) |
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- replace computation of density (in Function STATE1, opps_calc.F) by a call |
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to S/R FIND_RHO_SCALAR |
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- pass sigmaR to S/R PP81_CALC, MY82_CALC (but not yet used) and to GGL90_CALC |
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and use it for N^2 calculation in ggl90_calc.F (save 2 density computations); |
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affects output (vermix.ggl90) at truncation level. |
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o testreport: |
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- change adjustment of SIZE.h for mpi+mth testing: preserve enough tiles |
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(nSx,nSy) for the number of threads (from eedata.mth) |
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o model/src: |
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- remove 2nd set of calls at the top of initialise_varia.F (Adjoint part) |
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related to Non_Lin Free-Surf or Bottom-Control (but not longer necessary). |
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o verification/tutorial_tracer_adjsens/ |
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- compile with ALLOW_CG2D_NSA |
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- run with nonlinFreeSurf=3 |
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- update reference output_adm.txt |
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o tools/genmake2: |
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- add "-DHAVE_NETCDF" to the DEFINES list when NetCDF is available ; |
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refine usePROFILES switching off (only when NetCDF is not available). |
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o verification (atmospheric set-up): |
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- change eosType='IDEALGAS' to eosType='IDEALG' to match variable declaration |
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o pkg/profiles : refine profiles and files handling. |
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o model/src and pkg/ecco : introduce run-time switch usePROFILES. |
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o model/src/the_main_loop.F, forward_step.F and pkg/exf/EXF_OPTIONS.h : |
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- changes to use model/src/the_main_loop.F rather than the ecco version |
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in ecco type adjoint runs. |
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o model/src: |
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- move computation of recip of grid distance & area from INI_MASKS_ETC to INI_GRID |
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- move setting of h0Fac[C,W,S] from INI_LINEAR_PHISURF to INI_MASKS_ETC |
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- update_masks_etc.F: rename SMOOTH*_R4,R8 function to the corresponding type (RS,RL) |
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o model/src: |
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- fix S/R UPDATE_CG2D for ALLOW_DEPTH_CONTROL case (was empty before); |
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update output of test experiment bottom_ctrl_5x5. |
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o pkg/generic_advdiff: |
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- implement vertical bi-harmonic diffusion (for now, only for T & S and |
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only explicitly). |
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o verification/bottom_ctrl_5x5/ |
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update reference output (results changed quite some time ago, |
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not sure when; but new reference results look ok in terms of grdchk) |
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o verification/1D_ocean_ice_column/ |
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For verification purposes, the exact adjoint rather than an approx. |
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should be used (e.g., to comare against F.D. or TLM). |
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removed autodiff_inadmode*_ad.F routines in code_ad/ |
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Update results/ accordingly. |
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o pkg/cal: |
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- change cal_getdate.F so that output date is function of input time only |
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(less ambiguous, not mixed up with input iteration number). |
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- fix calendarDumps for non-zero phase-lag (S/R CAL_TIME2DUMP). |
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o pkg/diagnostics: |
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- implement calendarDumps also for stats-diags |
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- implement calendarDumps also for snap-shot output (negative freq) |
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- for now, ignores calendarDumps if non-zero phase-lag. |
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checkpoint63n (2012/06/04) |
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o model/src: |
o model/src: |
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- recompute rSurfW & S to ensure consistent column thickness (needed for rStar) |
- recompute rSurfW & S to ensure consistent column thickness (needed for rStar) |
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between Sum_k(hFac*drF) and rSurf-rLow, for now only when using pkg/shelfice; |
between Sum_k(hFac*drF) and rSurf-rLow, for now only when using pkg/shelfice; |
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