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revision 1.1642 by jmc, Tue Apr 3 02:41:22 2012 UTC revision 1.1663 by jmc, Fri Jun 1 18:49:32 2012 UTC
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6    
7  o model/src:  o model/src:
8      - recompute rSurfW & S to ensure consistent column thickness (needed for rStar)
9        between Sum_k(hFac*drF) and rSurf-rLow, for now only when using pkg/shelfice;
10      - use h0FacC, W & S to compute hFac_surfC, W & S in calc_surf_dr.F (more
11        similar to calc_r_star.F); update results of experiment internal_wave and
12        tutorial_global_oce_in_p (affected @ truncation level).
13    o pkg/shelfice:
14      - add parameterisation of advective-diffusive flux into the ice shelf
15        according to Holland and Jenkins (1999), eq.22-33, as suggested by Jan De Ryd
16      - simply eps3/3a computation
17    o eesupp:
18     - add new CPP option (DISCONNECTED_TILES) to disconnect tiles (no exchange
19       between tiles, just fill-in edges assuming locally periodic subdomain) and
20       add corresponding exchange subroutines (EXCH0);
21     - new CG-solver version (_EX0) for disconnected-tiles special case.
22    o model/src (CG-solvers):
23     - modify Single-Reduction version (CG2D_SR) in case cg2dMaxIters is reached
24       (similar final residual output and max-Iter number as with standard version);
25     - allows to store and use lowest-residual solution (standard & _SR versions);
26     - cleaning up (remove old, commented out code, LETS_MAKE_JAM ...).
27     - by default, also compile CG2D_SR version (define ALLOW_SRCG in CPP_OPTIONS.h)
28    o eesup/src:
29     - global_vec_sum.F cleaning: add a BARRIER ; update comments ; remove ndef
30       ALWAYS_USE_MPI (no longer needed after fixing usingMPI settings - March 2012)
31    o pkg/salt_plume added to lab_sea/input_ad.noseaicedyn
32    
33    checkpoint63m (2012/04/27)
34    o pkg/shelfice:
35     - account for partical cells in surface level below ice-shelf for hydrostatic
36       pressure calculion (set uniformFreeSurfLev to F); update isomip experiments.
37    o ad test experiments:
38     - update and rename to "ad_optfile.local" local AD-optfile specific to a
39       particular adjoint verification experiment (in verification/*/code_ad/)
40    o pkg/seaice & pkg/exf:
41     - Part two of ECCO-CLIVAR code merges.
42       Completes merge of seaice area relax. code.
43       Requires unified CPP option EXF_ALLOW_SEAICE_RELAX
44       to be set in EXF_OPTIONS.h since this pkg controls its I/O
45       (and avoids second CPP option in SEAICE_OPTIONS.h)
46     - change default value of costIceStart & costIceEnd to a valid date.
47     - add snowPrecip to HSNOW in seaice_growth
48    o pkg/ptracers:
49     - move ptracers summary and setup check into separated S/R ; add a check for
50       valid PTRACERS_Iter0 value (error+stop or just warning).
51    o pkg/cal (+ pkg/ecco):
52     - avoid calling a S/R with 2 times the same arg (FWD: unless both are only used
53       as input; and for AD, unless both are not differentiable (e.g., k index)).
54    o model/src:
55     - define internal flag "uniformFreeSurfLev" (=T when free-surface level-index
56       is everywhere k=1) to speed-up some calculations (by pass kSurf reference);
57       temporary set to usingZCoords value (to be changed to F when using shelfice).
58     - hydrostatic pressure: implement partial cell near the surface also for
59       Z-coordinates (for the case where uniformFreeSurfLev=F); replace test on
60       usingZCoords with test on uniformFreeSurfLev where needed (in NonHyd code).
61    o pkg/ctrl/ctrl_init.F:
62     - add a formal parameter to s/r ctrl_init_rec to print
63       xx_$(ctrl_valiable)_file for easier debugging
64     - move call of cal_* routines into the if-block where they are really
65       needed so that xx_$(ctrl_variable)_period can be 0 or -12 without having
66       to specify a startdate
67    o pkg/seaice:
68     - update comments in SEAICE_OPTIONS.h (+ similar update of lab_sea/code and
69       global_ocean.cs32x15/code versions).
70     - turn on seaice Multi-category (in data.seaice, SEAICE_multDim=7) for
71       verification experiment global_ocean.cs32x15.seaice and update results.
72    o pkg/exf:
73     - new S/R EXF_GETFIELD_START to return starting-time of a forcing field
74       (according to useExfYearlyFields).
75    o pkg/cal:
76     - move calendar setting & summary (previously in cal_readparams.F) into new
77       S/R CAL_INIT_FIXED to be called later in the initialisation process, once
78       length of the simulation is set (after SET_PARMS call); This is an attempt
79       to fix Pb when, e.g.: pkg/longstep, modifies the length of the run.
80     - For safety: keep a record of pkg/cal parameter settings status
81               to allow to STOP if one pkg/cal S/R is called too early.
82     - add a stop in all basic pkg/cal subroutines if called before setting is done.
83     - modify cal_getdate.F: stop when nothing was returned;
84       if called with myIter=-1, simply retrun modelBaseDate (1,2 = startDate_1,_2);
85       this allows to remove "cal.h" from seaice_read_parms.F & init_mnc_vars.F.
86    
87    checkpoint63l (2012/04/04)
88    o pkg/bbl:
89      - fix call to FIND_RHO_2D in bbl_calc_rho.F (case multi-tiles per proc);
90        update global_with_exf output.yearly.txt file.
91    o pkg/cal:
92      - start to clean-up cal_set.F ; fix for the case where baseTime is non-zero.
93      - remove 2 unsused and very short (1 line only) functions ;
94      - remove unsused subroutines from AD-Diff list.
95    o model/src:
96    - start to implement clean wait to stop in initialization S/R (config_check.F,    - start to implement clean wait to stop in initialization S/R (config_check.F,
97       packages_check.F and pkg/obcs/obcs_check.F + pkg/mypackage)       packages_check.F, ini_parms.F and pkg/obcs/obcs_check.F + pkg/mypackage)
98  o folowing PRINT_MESSAGE changes:  o folowing PRINT_MESSAGE changes:
99    - remove reminder multiple print to the same file (STDOUT) when multi-threads.    - remove reminder multiple print to the same file (STDOUT) when multi-threads.
100  o pkg/bbl:  o pkg/bbl:
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