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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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o pkg/atm_compon_interf: |
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- regroup per field origin (model & pkgs) the coupling storage routines |
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(which accumalate in time each coupling field) |
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- move bi,bj loops inside atm_store_my_data.F and store also wind-stress; |
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update accordingly + simplify aim_do_physics.F |
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checkpoint64n (2013/08/26) |
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o pkg/bbl: |
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- update formulation to reduce dispersion of tracer properties in bbl |
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- replaced horizontal and vertical transport parameters with velocities |
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- changes results for verification/global_with_exf.yearly |
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o verification/halfpipe_streamice: |
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- change to matrix construction; update both Fwd & AD output. |
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o verification/tutorial_tracer_adjsens: |
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- OpenAD test: switch to vector-invariant momentum since fluxform with |
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rStar causes problems with OpenAD; update output. |
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o tools: |
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- genmake2: define a common prefix for all temp-file names ; move them |
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to local /tmp disk (but would be easy to move them back); |
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- xmakedepend: apply the same switch for temp-files. |
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o pkg/offline: |
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- changes for use with rStar (NLFS): assume that we continue to provide |
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UVELMASS/hFacW_ini & VVELMASS/hFacS_ini (hFacWi,S_ini as written in grid |
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output files) and apply r* scaling at each time-step (function of the time |
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varying Eta field); use normal pickup files (needed for restart with NLFS). |
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o adjoint with OpenAD: |
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- move OpenAD-specific files from verification/OpenAD/code_oad_all to a new |
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package openad. This package has to be compiled for all runs with OpenAD |
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instead of specifying code_oad_all as a modification directory. |
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- link the fortran templates from tools/OAD_support to the build directory |
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for preprocessing to avoid conflicts between different setups compiled |
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simultaneously and simplify cleanup. |
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o pkg/exf: |
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- in exf_getforcing.F: comment out most of the EXCH calls (fields used by |
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main model or other pkgs are exchanged in EXF_MAPFIELDS). |
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o model/src: |
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- do_stagger_fields_exchanges.F: skip EXCH calls when using pkg/offline |
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(similar to do_fields_blocking_exchanges.F). |
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o tools/genmake2: |
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- remove TAF output src code just before calling staf (when not doing a fresh |
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built, will stop if things go wrong with staf). |
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- fix target "adobj" (left from TAF version-2 transition) |
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o pkg/diagnostics: |
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- add a parameter to track the status of pkg/diagnostics activation; |
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this replace/extend the use of logical param "settingDiags" (to check |
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when adding diag to the list) to also check any DIAGNOSTICS_[]FILL* call. |
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New S/R to print error message and stop when pkgStatus is not right. |
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- to try: add a warning when "data.diagnostics" exist but useDiagnostics=F. |
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checkpoint64m (2013/08/13) |
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o model/inc: |
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- move FCORI_MACROS.h from PARAMS(_MACROS).h to GRID_MACROS.h (left from |
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8 yrs ago modif when Coriolis arrays were moved from PARAMS.h to GRID.h) |
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o pkg/kpp & aim_v23: |
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- only call DIAGNOSTICS_FILL when useDiagnostics=TRUE. |
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o pkg/seaice: |
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- restore (last time on 2011/12/24) ability to compile pkg/seaice with |
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undefined pkg/exf ALLOW_ATM_TEMP or ALLOW_RUNOFF CPP-options. |
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- only call DIAGNOSTICS_FILL when useDiagnostics=TRUE. |
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o eesupp/src: |
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- fix check for overlap-size argument (myOLn.GT.MAX_OLY_EXCH) |
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in exch1_rx[_ad].template (thanks to Francois Lefeuvre report). |
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o switch to TAF version-2: |
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- add flow directives to "freeze" naming convention for ad-routines that |
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are used in I/O routines of adjoint state and associated common blocks |
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that are used in adcommon.h (backward compatible with version-1) |
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- update all ad-optfiles (in tools/adjoint_options + few local to some |
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verification exp) to switch to latest TAF version (currently 2.5.5); |
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merge "*_mpi" adoptfiles into the corresponding non-mpi (but commented |
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out except for diva). |
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- the major change with TAF version-2 is that both the differentiated |
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routines and the forward routines (new) are returned as part of the TAF |
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output source code. Update genmake2 accordingly. |
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- new output for AD experiment tutorial_global_oce_biogeo (better AD gradient |
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with version-2 when compared to TLM or FWD gradient); other experiments |
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output show minor changes (machine truncation level); update the few AD & |
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TLM output with 12 matching digits only (some prior to version-2 switch). |
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checkpoint64l (2013/08/05) |
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o model/src: |
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- in dynamics.F, skip the call to CALC_VISCOSITY if momViscosity=F |
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- main_do_loop.F: no longer includes additional (AUTODIFF) header files |
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when using TAF but only if using OpenAD. |
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o pkg/mom_common+fluxform+vecinv: |
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- always set horiz. viscosity arrays to background value before calling |
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MOM_CALC_VISC (in MOM_FLUXFORM & MOM_VECINV) and call S/R MOM_CALC_VISC |
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only when using variable horiz. viscosity (useVariableVisc=T); |
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- simplify mom_vecinv.F (only 1 block for momViscosity). |
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o pkg/mom_common: variable horiz. viscosity in NH code |
o pkg/mom_common: variable horiz. viscosity in NH code |
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- move horiz-viscosity 3-D arrays viscAh_W & viscA4_W (used in calc_gw.F) |
- move horiz-viscosity 3-D arrays viscAh_W & viscA4_W (used in calc_gw.F) |
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from model/inc/NH_VARS.h to pkg/mom_common/MOM_VISC.h |
from model/inc/NH_VARS.h to pkg/mom_common/MOM_VISC.h |
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