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Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
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============================== |
============================== |
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checkpoint64v (2014/04/11) |
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o pkg/ecco: |
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- add runtime parameters mdt[start,end]date[1,2] |
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- rename variable "tpmean" as "mdt" and "topexmeanfile" as "mdtdatfile" |
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o pkg/seaice: |
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- make deltaC a global variable, so that it can be used in ridging code |
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- first step towards ridging: introduce new routines that compute |
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ice strength based on ridging parameters |
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- add diagnostic for HSNOWITD |
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- add opnWtrFrac as a global variable (required for ridging scheme) |
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o pkg/salt_plume + pkg/seaice/seaice_growth.F |
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- add SALT_PLUME_IN_LEADS flag to activate pkg/salt_plume only when ice |
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AREA exceeds a threshold (code contributed by I.Fenty in 2011) |
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o verification/hs94.1x64x5: |
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- leave ALLOW_AUTODIFF_TAMC undefined in code_oad/AUTODIFF_OPTIONS.h |
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- do not use ECCO_CPPOPTIONS.h anymore for TAF & OpenAD Adjoint tests. |
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o autodiff: |
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- Start to include explicitly AUTODIFF_OPTIONS.h, COST_OPTIONS.h, |
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and CTRL_OPTIONS.h in src files (to enable to skip the ECCO_CPPOPTIONS.h) |
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For now, only in pkgs used in verification/hs94.1x64x5. |
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- Replace ALLOW_AUTODIFF_TAMC by ALLOW_AUTODIFF (except for tape/storage |
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which are specific to TAF/TAMC). |
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- Replace ALLOW_AUTODIFF_OPENAD by ALLOW_OPENAD: |
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since ALLOW_OPENAD is defined in PACKAGES_CONFIG.h (any time pkg/openad |
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is compiled), this simplifies/reduces which *_OPTIONS.h file to include. |
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- OpenAD: change Makefile to generate the appropriate AD_CONFIG.h when |
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building mitgcmuv_ad (make adAll). |
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o pkg/ecco: |
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- cost_gencost_seaicev4.F: |
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reformulate proxy cost as function of sst and local param SEAICE_freeze |
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change cost names from siv4-[sst,vol] to siv4-[deconc,exconc] |
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- add stop statement if old names siv4-[sst,vol] are used |
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- add snapshots + cost reports for atmospheric longwave |
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- remove factor 0.1 in front of wtau[u,v] |
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- replace never used flag ALLOW_TMI_COST_CONTRIBUTION with |
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ALLOW_TMI_SST_COST_CONTRIBUTION |
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o pkg/atm_phys: |
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- add some diagnostics for Short-wave and for convection S/R. |
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o pkg/seaice/seaice_growth: |
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- fix a bug in the lateral melt parameterization for SEAICE_ITD |
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in seaice_growth; tempFrz needs to be computed inside the i/j-loop |
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- rearrange loop order for better vector code in the same code block |
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- rewrite the floeDiameter formula to have fewer divisions |
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- (miraculously) none of this changes the results of seaice_itd |
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o pkg/smooth: |
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- move param smooth2Ddiffnbt to pkg/ecco |
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o pkg/salt_plume: |
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- salt_plume_frac.F: |
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clean up local param names |
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reformulate (1-frac) to frac; original 1-frac was based on swfrac code |
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o pkg/rw: |
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- add RS version of S/R READ_MFLDS_LEV. |
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o pkg/streamice: |
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- fix the restart test by writing/reading pickup_streamice files. |
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o pkg/seaice: |
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- refine checks for jfnk-related parameters |
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- comment out if statement with SEAICEuseIMEX parameter as long as there |
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is no IMEX code to avoid confusion and surprises |
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checkpoint64u (2014/03/07) |
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o verification/MLAdjust: |
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- rename secondary test suffix: |
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1.leith -> A4FlxF + switch to flux-form & add side-drag |
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0.leithD -> AhFlxF + switch to flux-form |
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0.smag -> AhVrDv (use Vorticity-Div. visc form) + add side-drag |
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0.leith -> AhStTn (use Strain-Tension visc form) + add side-drag |
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o pkg/mom_vecinv: |
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- remove unused arguments from S/R MOM_VI_HDISSIP & MOM_HDISSIP (as it used |
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to be before mom_calc_visc.F) |
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- skip the call to MOM_CALC_TENSION & MOM_CALC_STRAIN if not needed. |
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- add 2nd copy of vort3 & strain that knows about lateral BC (free/no slip): |
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this is simpler for the adjoint and for diagnostics. |
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o model/src + pkg/momentum: |
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- add input files for 2-D additional Western and Southern cell-edge wall |
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(e.g., to add "thin-wall" where it is =1). |
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- fix sideDrag option for thin-walls with Non-Lin Free-Surf |
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using 2nd hFacZ that is computed from initial (fix domain) hFac |
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- known limitations of thin wall implementation: not yet coded for sigma |
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coords; not working with CD-scheme neither. |
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o pkg/seaice: |
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- rename recently introduced parameters from (wrong name) AB to |
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BDF (backward difference time discretisation) |
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- retire runtime parameters SEAICEuseAB2, SEAICE_abEps |
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o tools/adjoint_options: |
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- remove setting of "OPENAD=true" (now set by command line "genmake2 -oad") |
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checkpoint64t (2014/02/01) |
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o pkg/ecco |
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- add compile flag ALLOW_GENCOST_TIMEVARY_WEIGHT in ECCO_OPTIONS.h and |
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runtime logical flag gencost_timevaryweight to read daily sea-ice sigma |
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- replace hard-coded record number and period which only work for monthly |
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with read-in runtime param that works for other periods (month,day,year) |
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o pkg/thsice |
o pkg/thsice |
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- corrected store directive fixes thsice adjoint gradient checks |
- corrected store directive fixes thsice adjoint gradient checks |
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o genmake2 & testreport: |
o genmake2 & testreport: |
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