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revision 1.1671 by gforget, Wed Jun 20 23:23:26 2012 UTC revision 1.1683 by gforget, Fri Jul 6 06:27:17 2012 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/autodiff:
8      - rename S/R INI_AUTODIFF to AUTODIFF_INIT_VARIA ;
9      - create new header file "AUTODIFF_PARAMS.h" for pkg/autodiff parameters
10        which are now read from new parameter file "data.autodiff" (inAdExact
11        previously in "data", use{KPP/GMRedi/SEAICE}inAdMode previously in data.pkg)
12      - add file "data.autodiff" in all verification/*/input_ad/ directories.
13      - add run-time parameter to turn On/Off SEAICEuseFREEDRIFT in adjoint/forward
14        mode (used in global_ocean.cs32x15.seaice_dynmix test exp.)
15    o verification/tutorial_tracer_adjsens/
16      - add extra sub-verification which uses "SOM" advection scheme
17        (2nd Order-Moment Advection Scheme, Prather Limiter) with
18          #define GAD_ALLOW_TS_SOM_ADV in GAD_OPTIONS.h
19        and in data:
20          multiDimAdvection=.TRUE.,
21          tempAdvScheme=81,
22          saltAdvScheme=81,
23    o model/src:
24      - introduce ALLOW_BALANCE_RELAX which allow the removal
25       of the global mean of relaxation terms by setting
26       balanceThetaClimRelax and balanceSaltClimRelax
27      - disable balanceEmPmR and balanceQnet in the case when useSeaice.
28       This case is now treated appropriately in seaice_growth.F
29    o pkg/seaice:
30    - do balanceEmPmR and balanceQnet based on the net fluxes
31      (SItflux) that enter the ocean+ice system rather than QNET
32      and EMPMR. Works best in real fresh water.
33    - SIatmFW, SIatmQnet, and SItflux computations had to be moved
34      out of the diagnotics bloc, and stored in global arrays.
35    
36    checkpoint63o (2012/06/29)
37    o vertical mixing schemes:
38      - remove unused S/R CALC_BUOYANCY (left from branch-atmos merging)
39      - replace computation of density (in Function STATE1, opps_calc.F) by a call
40        to S/R FIND_RHO_SCALAR
41      - pass sigmaR to S/R PP81_CALC, MY82_CALC (but not yet used) and to GGL90_CALC
42        and use it for N^2 calculation in ggl90_calc.F (save 2 density computations);
43        affects output (vermix.ggl90) at truncation level.
44    o testreport:
45      - change adjustment of SIZE.h for mpi+mth testing: preserve enough tiles
46        (nSx,nSy) for the number of threads (from eedata.mth)
47    o model/src:
48      - remove 2nd set of calls at the top of initialise_varia.F (Adjoint part)
49        related to Non_Lin Free-Surf or Bottom-Control (but not longer necessary).
50    o verification/tutorial_tracer_adjsens/
51      - compile with ALLOW_CG2D_NSA
52      - run with nonlinFreeSurf=3
53      - update reference output_adm.txt
54    o tools/genmake2:
55      - add "-DHAVE_NETCDF" to the DEFINES list when NetCDF is available ;
56        refine usePROFILES switching off (only when NetCDF is not available).
57    o verification (atmospheric set-up):
58      - change eosType='IDEALGAS' to eosType='IDEALG' to match variable declaration
59    o pkg/profiles : refine profiles and files handling.
60    o model/src and pkg/ecco : introduce run-time switch usePROFILES.
61  o model/src/the_main_loop.F, forward_step.F and pkg/exf/EXF_OPTIONS.h :  o model/src/the_main_loop.F, forward_step.F and pkg/exf/EXF_OPTIONS.h :
62    - changes to use model/src/the_main_loop.F rather than the ecco version    - changes to use model/src/the_main_loop.F rather than the ecco version
63      in ecco type adjoint runs.      in ecco type adjoint runs.
64  o model/src:  o model/src:
65    - fix S/R UPDATE_CG2D for ALLOW_DEPTH_CONTROL case (was empty before);    - move computation of recip of grid distance & area from INI_MASKS_ETC to INI_GRID
66      - move setting of h0Fac[C,W,S] from INI_LINEAR_PHISURF to INI_MASKS_ETC
67      - update_masks_etc.F: rename SMOOTH*_R4,R8 function to the corresponding type (RS,RL)
68    o model/src:
69      - fix S/R UPDATE_CG2D for ALLOW_DEPTH_CONTROL case (was empty before);
70      update output of test experiment bottom_ctrl_5x5.      update output of test experiment bottom_ctrl_5x5.
71  o pkg/generic_advdiff:  o pkg/generic_advdiff:
72    - implement vertical bi-harmonic diffusion (for now, only for T & S and    - implement vertical bi-harmonic diffusion (for now, only for T & S and
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