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revision 1.1655 by dimitri, Sat Apr 21 23:55:37 2012 UTC revision 1.1676 by jmc, Tue Jun 26 02:14:33 2012 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o model/src:
8      - remove 2nd set of calls at the top of initialise_varia.F (Adjoint part)
9        related to Non_Lin Free-Surf or Bottom-Control (but not longer necessary).
10    o verification/tutorial_tracer_adjsens/
11      - compile with ALLOW_CG2D_NSA
12      - run with nonlinFreeSurf=3
13      - update reference output_adm.txt
14    o tools/genmake2:
15      - add "-DHAVE_NETCDF" to the DEFINES list when NetCDF is available ;
16        refine usePROFILES switching off (only when NetCDF is not available).
17    o verification (atmospheric set-up):
18      - change eosType='IDEALGAS' to eosType='IDEALG' to match variable declaration
19    o pkg/profiles : refine profiles and files handling.
20    o model/src and pkg/ecco : introduce run-time switch usePROFILES.
21    o model/src/the_main_loop.F, forward_step.F and pkg/exf/EXF_OPTIONS.h :
22      - changes to use model/src/the_main_loop.F rather than the ecco version
23        in ecco type adjoint runs.
24    o model/src:
25      - move computation of recip of grid distance & area from INI_MASKS_ETC to INI_GRID
26      - move setting of h0Fac[C,W,S] from INI_LINEAR_PHISURF to INI_MASKS_ETC
27      - update_masks_etc.F: rename SMOOTH*_R4,R8 function to the corresponding type (RS,RL)
28    o model/src:
29      - fix S/R UPDATE_CG2D for ALLOW_DEPTH_CONTROL case (was empty before);
30        update output of test experiment bottom_ctrl_5x5.
31    o pkg/generic_advdiff:
32      - implement vertical bi-harmonic diffusion (for now, only for T & S and
33        only explicitly).
34    o verification/bottom_ctrl_5x5/
35      update reference output (results changed quite some time ago,
36      not sure when; but new reference results look ok in terms of grdchk)
37    o verification/1D_ocean_ice_column/
38      For verification purposes, the exact adjoint rather than an approx.
39      should be used (e.g., to comare against F.D. or TLM).
40      removed autodiff_inadmode*_ad.F routines in code_ad/
41      Update results/ accordingly.
42    o pkg/cal:
43      - change cal_getdate.F so that output date is function of input time only
44        (less ambiguous, not mixed up with input iteration number).
45      - fix calendarDumps for non-zero phase-lag (S/R CAL_TIME2DUMP).
46    o pkg/diagnostics:
47      - implement calendarDumps also for stats-diags
48      - implement calendarDumps also for snap-shot output (negative freq)
49      - for now, ignores calendarDumps if non-zero phase-lag.
50    
51    checkpoint63n (2012/06/04)
52    o model/src:
53      - recompute rSurfW & S to ensure consistent column thickness (needed for rStar)
54        between Sum_k(hFac*drF) and rSurf-rLow, for now only when using pkg/shelfice;
55      - use h0FacC, W & S to compute hFac_surfC, W & S in calc_surf_dr.F (more
56        similar to calc_r_star.F); update results of experiment internal_wave and
57        tutorial_global_oce_in_p (affected @ truncation level).
58    o pkg/shelfice:
59      - add parameterisation of advective-diffusive flux into the ice shelf
60        according to Holland and Jenkins (1999), eq.22-33, as suggested by Jan De Ryd
61      - simply eps3/3a computation
62    o eesupp:
63     - add new CPP option (DISCONNECTED_TILES) to disconnect tiles (no exchange
64       between tiles, just fill-in edges assuming locally periodic subdomain) and
65       add corresponding exchange subroutines (EXCH0);
66     - new CG-solver version (_EX0) for disconnected-tiles special case.
67    o model/src (CG-solvers):
68     - modify Single-Reduction version (CG2D_SR) in case cg2dMaxIters is reached
69       (similar final residual output and max-Iter number as with standard version);
70     - allows to store and use lowest-residual solution (standard & _SR versions);
71     - cleaning up (remove old, commented out code, LETS_MAKE_JAM ...).
72     - by default, also compile CG2D_SR version (define ALLOW_SRCG in CPP_OPTIONS.h)
73    o eesup/src:
74     - global_vec_sum.F cleaning: add a BARRIER ; update comments ; remove ndef
75       ALWAYS_USE_MPI (no longer needed after fixing usingMPI settings - March 2012)
76    o pkg/salt_plume added to lab_sea/input_ad.noseaicedyn
77    
78    checkpoint63m (2012/04/27)
79    o pkg/shelfice:
80     - account for partical cells in surface level below ice-shelf for hydrostatic
81       pressure calculion (set uniformFreeSurfLev to F); update isomip experiments.
82  o ad test experiments:  o ad test experiments:
83   - update and rename to "ad_optfile.local" local AD-optfile specific to a   - update and rename to "ad_optfile.local" local AD-optfile specific to a
84     particular adjoint verification experiment (in verification/*/code_ad/)     particular adjoint verification experiment (in verification/*/code_ad/)
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