/[MITgcm]/MITgcm/doc/tag-index
ViewVC logotype

Diff of /MITgcm/doc/tag-index

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.1455 by gforget, Wed Jun 15 01:31:34 2011 UTC revision 1.1476 by mlosch, Tue Jul 19 12:54:25 2011 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o add code for TEOS-10 (www.teos-10.org, McDougall et al. 2011). Use
8      this eos with eosType = 'TEOS10', in data (PARM01). This eos implies
9      that THETA and SALT are "conservative temperature" and "absolute
10      salinity"
11    o pkg/ctrl
12      - fix computation of endrec in s/r ctrl_init_rec
13      - ctrl_pack/unpack_*: remove unused variables and some obsolete code
14    o pkg/seaice/seaice_growth.F
15      - fix recomputation with FENTY_AREA_EXPANSION_CONTRACTION code,
16        remove then obsolete STORE directives
17      - fix STORE directives for tice and tices, so that only the
18        appropriate part of the fields are stored (and not the entire
19        field)
20      - cosmetic changes: adjust CPP flags and indentation for better
21        legibilty
22    o pkg/autodiff: add mnc-output of adBottomDragFld (code contributed by
23      Chris Wilson)
24    o pkg/gmredi:
25       Add Sub-Meso Eddies parameterisation from Baylor (for now, disabled with TAF),
26       and test it in verification exp. "front_relax.bvp" (update output.bvp.txt)
27    
28    checkpoint63 (2011/07/11)
29    o pkg/exch2:
30     - rename+move: nTiles in W2_EXCH2_PARAMS.h --> exch2_nTiles in W2_EXCH2_TOPOLOGY.h
31     - exch2 version of Cumul-Sum routine: S/R W2_SET_MAP_CUMSUM set up the
32       (2*nTiles)x(nTiles) Cumul-Sum matrix and Master Proc collects all tiles X,Y
33       increments, calculates Cumul-Sum @ tile origin and sends results to each tile.
34    o pkg/diagnostics:
35     - deal with pairs of post-processed diags which are computed together; in
36       particular, re-order list of diags within 1 file to save 2nd computation.
37     - add S/R to compute velocity stream-function (called after velocity-potential
38       calculation) from divergence free transport -> new diagnostics "PsiVEL".
39     - add parameter to select grid-point location where PsiVEL == 0.
40    o eesupp/src:
41       new S/R to calculate cumulated sum on tiled array, corner grid-cell location
42       (specific S/R needed with exch2 topology - for now, just print an error msg)
43    o pkg/shelfice
44     - Implement friction velocity-dependent transfer coefficients following
45       Holland and Jenkins, JPO, 1999
46       Original code by M. Losch with small modifs.
47       Enable with CPP option SHI_ALLOW_GAMMAFRICT
48       and runtime flag SHELFICEuseGammaFrict
49    o verification lab_sea & global_ocean.cs32x15:
50     - use tools/xmakedepend (instead of cyrus_makedepend, in genmake_local):
51       does not miss some dependencies (but is slower) and also works with many files
52       (default makedepend limitation for AD built).
53     - use cyrus_makedepend in adjustment.128x64x1 (so that it still tested).
54    o pkg/diagnostics:
55     - add run-time parameter "useMissingValue" (def=False) to fill land-point
56        (i.e., where mask=0) with MissingValue ; used only in MNC output file.
57       This replaces CPP-option DIAGNOSTICS_MISSING_VALUE.
58     - Extend the use of "missing_value" setting from data.diagnostics for the case
59       of counter-diagnostics (where fraction-weight is zero). This applies both to
60       MNC and MDS output files.
61    o pkg/seaice/seaice_growth.F:
62      - add 'a priori' cap of latent heat flux based on actual mass considerations
63        when SEAICE_ADD_SUBLIMATION_TO_FWBUDGET is used in conjunction with the
64        non-legacy seaice_solve4temp.
65      - add diagnostic of the residual sublimation freshwater flux (the freshwater
66        flux taken from the ocean if the total actual latent heat fluxes exceed
67        the maximum)
68      - remove the CPP switch around the *_FWbySublim unit change and move diagnostic
69       fill for SIatmQnt, SIfwSubl, SIatmFW to the end of seaice_growth.F.
70      - add diagnostic of the actual sublimation freshwater flux (that is 0. ifndef
71       SEAICE_ADD_SUBLIMATION_TO_FWBUDGET) and of the latent heat flux (evap+sublim).
72      - bug fix : frWtrAtm needs a_FWbySublim ifdef SEAICE_ADD_SUBLIMATION_TO_FWBUDGET.
73      - bug fix : missing part to Martin's r_FWbySublim pathological case fix.
74    o verification 1D_ocean_ice_column:
75       made model domain truly 1x1x23 instead of 5x5x23 with only center cell (3,3,:) wet
76       update results
77    o pkg/diagnostics:
78     - Implement setting of "Post-Processed" diagnostics (corresponding to gdiag(5)='P')
79       which are not filled-up but computed from other diags ; In this case, the mate
80       diag points to the primary (filled-up) diag to used for post processing.
81     - Update Velocity-potential computation using post-processed diag framework.
82     ==> Change the ordering of fields and time-periods in MDS output file
83       when using periodic averaging: now writes one time record with the full set
84       of fields for this time period, then the next time reccord (it used to be
85       one field with the full set of time records then the next field).
86         Note: this is now similar to NetCDF (MNC) output file. <==
87    
88    checkpoint62z (2011/06/21)
89    o adjoint monitor:
90     - Add adjoint monitor output for packages exf, seaice
91       and update relevant testreport output
92  o pkg/seaice:  o pkg/seaice:
93   - re-order diags inits so that they appear in order in available_diagnostics.log   - re-order diags inits so that they appear in order in available_diagnostics.log
94   - added diags: hsnow thermo. rates of change, area preceeding ridiging process,   - added diags: hsnow thermo. rates of change, area preceeding ridiging process,
# Line 11  o pkg/seaice: Line 96  o pkg/seaice:
96   - modified diag: SIdA; output actual effect, as the description states.   - modified diag: SIdA; output actual effect, as the description states.
97   - modified description: SIqneti, SIqneto, SIuheff, SIvheff, SIdAb*, HSNOW.   - modified description: SIqneti, SIqneto, SIuheff, SIvheff, SIdAb*, HSNOW.
98   - retired redundant diags: SIyneg, SIfice, SIsnwice, SIthdgrh.   - retired redundant diags: SIyneg, SIfice, SIsnwice, SIthdgrh.
99     (SIyneg->SIdHbOCN; SIfice->SIdHbATC; SIsnwice->SIdHbFLO;     (SIyneg->SIdHbOCN; SIfice->SIdHbATC; SIsnwice->SIdHbFLO;
100      and SIthdgrh->SIdHbOCN+SIdHbATC+SIdHbATO)      and SIthdgrh->SIdHbOCN+SIdHbATC+SIdHbATO)
101   - modified diags (2) : switch all SIdA*, SIdH*, SIdS* from delta to rates.   - modified diags (2) : switch all SIdA*, SIdH*, SIdS* from delta to rates.
102   - added diagnostics for seaice genereic tracers (SItr*).   - added diagnostics for seaice generic tracers (SItr*).
103   - added SItrUnit and SItrNameLong run time param (for SItr* diags).   - added SItrUnit and SItrNameLong run time param (for SItr* diags).
104   - in diag names, replaced 'PrTh' abbrev. of 'preceeding thermo' with 'PT'.   - in diag names, replaced 'PrTh' abbrev. of 'preceeding thermo' with 'PT'.
105     I. Fenty: 18-Jun-2011:
106     Minor changes to seaice package:
107     1) Retired old variables (A22, SEAICE_lhsublim, areaMax, areaMin, hiceMin) and
108        added some new ones (SEAICE_area_reg, SEAICE_hice_reg, SEAICE_area_floor)
109       - Differentiated "regularization variables" from "floor variables"
110        * areaMin became SEAICE_area_reg (old A22) and SEAICE_area_floor
111        * hiceMin became SEAICE_hice_reg (old hiceMin)
112          (with _reg meaning regularization variable)
113       - SEAICE_lhSublim becomes lhSublim, the sum of SEAICE_lhEvap and SEAICE_lhFusion
114        so as to ensure energy conservation when going between phases
115      - A22 was not used anywhere
116     2) Changed regularization procedure for heffActual and hsnowActual to ensure
117        well-boundedness and smooth adjoint in seaice_growth.F
118     3) Fixed a bug where seaice_solve4temp would not recognize ice-free grid cells
119        because the old regularization always set heffActual >= 0.05 cm
120     4) Changed the model so that the default behavior is to put a small (10^-5) "floor"
121        on AREA when HEFF > 0.
122      - went from requiring ALLOW_PRECLUDE_INFINITESIMAL_AREA to be defined to
123        requiring that DISABLE_AREA_FLOOR *not* be defined
124     Affected verifications:
125      - 1D_ocean_ice_column (output.txt output_adm.txt)
126      - global_ocean.cs32x15 (output.seaice.txt output_adm.seaice.txt)
127  o pkg/diagnostics:  o pkg/diagnostics:
128    - move MNC code from diagnostics_out.F into new diagnostics_mnc_out.F (2 S/R).    - move MNC code from diagnostics_out.F into new diagnostics_mnc_out.F (2 S/R).
129    - rename S/R GETDIAG to DIAGNOSTICS_GET_DIAG and change type of 1rst argument    - rename S/R GETDIAG to DIAGNOSTICS_GET_DIAG and change type of 1rst argument
# Line 24  o pkg/diagnostics: Line 131  o pkg/diagnostics:
131    - add pieces of code to compute velocity potential at each level (new diagnostics    - add pieces of code to compute velocity potential at each level (new diagnostics
132      PhiVEL, works only when UVELMASS & VVELMASS are also turned on);      PhiVEL, works only when UVELMASS & VVELMASS are also turned on);
133      for now, using same params as CG2D (target-resisual, max Nb of iter ...).      for now, using same params as CG2D (target-resisual, max Nb of iter ...).
134      - fix few issues with counter diagnostics in diagnostics_setdiag.F &
135        diagstats_setdiag.F (if diagnostic counter is itself a counter diag)
136        and in diagnostics_fract_fill.F (do not need a valid pointer for the
137        diagnostics counter-mate); check that definition of counter-diagnostic
138        includes a valid counter-mate (in diagnostics_set_levels.F).
139  o model/src (rStar):  o model/src (rStar):
140    - add rStar scaling factor in diags_phi_hyd.F (similar to calc_grad_phi_hyd.F);    - add rStar scaling factor in diags_phi_hyd.F (similar to calc_grad_phi_hyd.F);
141      affect solution only if z* with full pressure in EOS;      affect solution only if z* with full pressure in EOS;
Legend:
Removed from v.1.1455  
changed lines
  Added in v.1.1476
  ViewVC Help
Powered by ViewVC 1.1.22