4 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
5 |
============================== |
============================== |
6 |
|
|
7 |
|
o tools/genmake2: |
8 |
|
- change default makedepend from the system default to tools/xmakedepend: |
9 |
|
When no makedepend is specified, select tools/xmakedepend it the test pass, |
10 |
|
otherwise select the system default (if exist and pass the test) or |
11 |
|
try to build cyrus-makedepend ; stop if none of the 3 works. |
12 |
|
o pkg/exf & pkg/thsice: |
13 |
|
- In case Energy-Reference-Level (ERL) is used (temp_EvPrRn=0), account |
14 |
|
for energy content of Precip + RunOff & Evap. Assumes: |
15 |
|
1) Rain has same temp as Air. |
16 |
|
2) Snow has no heat capacity (consistent with seaice & thsice pkgs) |
17 |
|
3) Run-Off comes at the temp of surface water (with same Cp) |
18 |
|
4) Evap over ocean is released to the Atmos @ surf-temp (=SST); should be |
19 |
|
put directly into Latent Heat flux & should use water-vapor heat capacity. |
20 |
|
5) Evap over snow/seaice (pkg/thsice) assumes constant Lf+Lv (consistent |
21 |
|
with snow having no Cp) => water vapor is released to Atmos @ 0^oC (=ERL). |
22 |
|
o pkg/seaice: simplify the use of CPP flags in JFNK-related files |
23 |
|
(compile when SEAICE_ALLOW_JFNK is defined) |
24 |
|
o pkg/thsice: |
25 |
|
- fix oceanic flux diagnostics & timeave (left from new sequence of calls |
26 |
|
implementation): move THSICE_AVE call after the advection (called directly |
27 |
|
from thsice_do_advect.F). |
28 |
|
o verification/global_ocean.90x40x15 and OpenAD: |
29 |
|
New experiment for OpenAD is identical to the one in input_ad except that |
30 |
|
multiDimAdvection=.FALSE., |
31 |
|
There is still an issue with this. |
32 |
|
o pkg/thsice: |
33 |
|
- account for ice velocity (ocean relative velocity) in turbulent heat flux |
34 |
|
at the base of the ice; update output of global_ocean.cs32x15 (icedyn) |
35 |
|
and offline_exf_seaice (main test). |
36 |
|
|
37 |
|
checkpoint64f (2013/03/31) |
38 |
|
o verification/OpenAD: |
39 |
|
- new (smaller, without OAD_DEBUG) output_oadm.txt generated using gfortran. |
40 |
|
o verification/isomip, pkg/shelfice and OpenAD: |
41 |
|
- add OpenAD setup to this exp and make shelfice package work with OpenAD |
42 |
|
o verification/tutorial_global_oce_biogeo: |
43 |
|
- update AD and TLM output after turning off ALLOW_FE (in DIC_OPTIONS.h) |
44 |
|
o verification/offline_exf_seaice: |
45 |
|
- replace adjoint experiment (now similar to fwd input.thermo/ setup). |
46 |
|
o verification/tutorial_tracer_adjsens, pkg/ptracers and OpenAD: |
47 |
|
- add OpenAD setup to this exp and make ptracers package work with OpenAD |
48 |
|
o pkg/seaice/seaice_evp.F: |
49 |
|
mask the asymmetric contribution of the ice-ocean stress (when |
50 |
|
the turningAngle is non-zero) over open water to avoid stripes |
51 |
|
in the EVP-solutions after many EVP-substeps. This does not change |
52 |
|
the verification experiment (because turningAngle=0 in that experiment), |
53 |
|
but will affect other EVP solutions with turningAngle.ne.0 |
54 |
|
o verification, AD & TLM output: |
55 |
|
- new TAF version 2.3.10 (previously 2.3.8) add more parenthesis in multiple |
56 |
|
additions and multiplications which affect results at machine truncation |
57 |
|
level. Update few AD output (1D_ocean_ice_column, bottom_ctrl_5x5, |
58 |
|
lab_sea.noseaicedyn & offline_exf_seaice) and TLM output |
59 |
|
(1D_ocean_ice_column & tutorial_tracer_adjsens.som81) which had only 12 |
60 |
|
digits of matching. |
61 |
|
o pkg/seaice: |
62 |
|
modify lsr-algorithm so that it vectorizes AND converges by using a |
63 |
|
"zebra" method: split vector loop into two with step size 2; this |
64 |
|
solves a general convergence problem for the JFNK solver on a vector |
65 |
|
computer. It has the potential to even improve convergence for |
66 |
|
non-vector machines, but it does change the results so it is turned |
67 |
|
off by default. To turn on define CPP-flags SEAICE_VECTORIZE_LSR and |
68 |
|
SEAICE_VECTORIZE_LSR_ZEBRA in SEAICE_OPTIONS.h |
69 |
|
|
70 |
|
checkpoint64e (2013/03/05) |
71 |
|
o pkg/ecco and several verification experiments: |
72 |
|
Remove special versions of the_model_main.F, the_main_loop.F, forward_step.F |
73 |
|
from ecco package, and revert to unified routine in model/src/ |
74 |
|
Adjust verification experiments accordingly, especially gloal_oce_llc90 |
75 |
|
Should conclude long-standing work by Gael to reconsile the_main_loop with |
76 |
|
ECCO and will enable OpenAD's revolve loop in ECCO setup. |
77 |
o pkg/generic_advdiff: |
o pkg/generic_advdiff: |
78 |
- implement compressible flow method for multi-dim advection (similar to |
- implement compressible flow method for multi-dim advection (similar to |
79 |
gad_som_advect.F); add new option "GAD_MULTIDIM_COMPRESSIBLE" (since |
gad_som_advect.F); add new option "GAD_MULTIDIM_COMPRESSIBLE" (since |
100 |
- rename SEAICE_CALC_LSR_COEFFS into SEAICE_LSR_CALC_COEFFS |
- rename SEAICE_CALC_LSR_COEFFS into SEAICE_LSR_CALC_COEFFS |
101 |
- use new subroutines seaice_lsr_tridiagu/v in s/r seaice_preconditioner |
- use new subroutines seaice_lsr_tridiagu/v in s/r seaice_preconditioner |
102 |
o OpenAD support |
o OpenAD support |
103 |
Reorganize S/R call for overall time-stepping loop to facilitate |
Reorganize S/R call for overall time-stepping loop to facilitate |
104 |
OpenAD revolve loop replacement |
OpenAD revolve loop replacement |
105 |
(new S/R main_do_loop.F) |
(new S/R main_do_loop.F) |
106 |
o model/src: |
o model/src: |
107 |
- add 3-D array 3rd dimension to argument list of S/R ADAMS_BASHFORTH2/3; |
- add 3-D array 3rd dimension to argument list of S/R ADAMS_BASHFORTH2/3; |
108 |
- pkg/cheapaml: remove local S/R ADAMS2d and use instead standard S/R |
- pkg/cheapaml: remove local S/R ADAMS2d and use instead standard S/R |