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revision 1.1469 by ifenty, Wed Jun 29 21:44:26 2011 UTC revision 1.1489 by dimitri, Sun Aug 7 07:08:14 2011 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o adding package bbl (Bottom Boundary Layer)
8      description in MITgcm/pkg/bbl/bbl_description.tex
9      example/test experiment in MITgcm_contrib/bbl
10    
11    o adjoint verifications
12      - changed 5 experiments to multi-threaded
13        * global_ocean.90x40x15
14        * obcs_ctrl
15        * offline_exf_seaice
16        * tutorial_dic_adjoffline
17        * tutorial_tracer_adjsens
18        changed reference output for those that crossed tile boundaries
19        (changed choices of gradient check positions)
20      - temporary bug fix in grdchk_loc.F for obcs
21    
22    o genmake2 & testreport
23      - add target "obj" (just for OBJFILES files) to Makefile;
24      - add option to specify FEXTRAFLAGS on command line.
25    o pkg/mypackage:
26      - remove bi,bj arguments from argument list of S/R MYPACKAGE_CALC_RHS
27    
28    checkpoint63a (2011/08/02)
29    o pkg/diagnostics (velocity potential):
30      - fix velocity-potential calculation when using OBCS: balance net inflow
31        at each level (new S/R OBCS_DIAG_BALANCE).
32      - fix some of the problems with OBCS in stream-function calculation.
33    o pkg/exf/exf_readparms.F
34      - make treatment of optional namelists (EXF_NML_04, EXF_NML_SGRUNOFF,
35        EXF_NML_OBCS) more consistent, so that you need not have these lists
36        in data.exf when they are not used.
37    o optim/optim_readdata.F:
38      - add some output about obcs variables that might help debugging
39      - add a check about nvarlength
40    o pkg/ctrl: once again, fix computation of endrec in s/r ctrl_init_rec
41    o pkg/diagnostics (velocity potential):
42      - fix mask for OBCS (still problems in stream-function with OBCS);
43      - add specific parameter (default = main code CG2D params) for solver;
44      - in case of poor convergence, use solution corresponding to lowest residual.
45    o pkg/seaice/seaice_growth.F: small changes that permit vectorizable
46      adjoint code. In general statements like tmpscal=fld(i,j) are problematic
47      and should be avoided where possible.
48    o model/src (rStar):
49      - include r* effect on reference-state (PhiRef) in totPhiHyd
50        (so that it's really the potential anomaly at the cell center);
51        affect solution only if z* with full pressure in EOS.
52      - test-exp global_ocean.90x40x15: reduce viscA4 (was not stable) and
53        update output (because of z* in totPhiHyd and viscA4 changes);
54      - keep the previous diagnostics as "PHIHYDcR" (closer to potential anomaly
55        @ constant r) until interpolation at constant r is implemented.
56    o pkg/diagnostics
57      - fix RCENTER diagnostics in case cell center is not at interface middle
58    o add code for TEOS-10 (www.teos-10.org, McDougall et al. 2011). Use
59      this eos with eosType = 'TEOS10', in data (PARM01). This eos implies
60      that THETA and SALT are "conservative temperature" and "absolute
61      salinity"
62    o pkg/ctrl
63      - fix computation of endrec in s/r ctrl_init_rec
64      - ctrl_pack/unpack_*: remove unused variables and some obsolete code
65    o pkg/seaice/seaice_growth.F
66      - fix recomputation with FENTY_AREA_EXPANSION_CONTRACTION code,
67        remove then obsolete STORE directives
68      - fix STORE directives for tice and tices, so that only the
69        appropriate part of the fields are stored (and not the entire
70        field); update global_ocean.cs32x15.seaice AD output.
71      - cosmetic changes: adjust CPP flags and indentation for better
72        legibilty
73    o pkg/autodiff: add mnc-output of adBottomDragFld (code contributed by
74      Chris Wilson)
75    o pkg/gmredi:
76       Add Sub-Meso Eddies parameterisation from Baylor (for now, disabled with TAF),
77       and test it in verification exp. "front_relax.bvp" (update output.bvp.txt)
78    
79    checkpoint63  (2011/07/11)
80    o pkg/exch2:
81     - rename+move: nTiles in W2_EXCH2_PARAMS.h --> exch2_nTiles in W2_EXCH2_TOPOLOGY.h
82     - exch2 version of Cumul-Sum routine: S/R W2_SET_MAP_CUMSUM set up the
83       (2*nTiles)x(nTiles) Cumul-Sum matrix and Master Proc collects all tiles X,Y
84       increments, calculates Cumul-Sum @ tile origin and sends results to each tile.
85    o pkg/diagnostics:
86     - deal with pairs of post-processed diags which are computed together; in
87       particular, re-order list of diags within 1 file to save 2nd computation.
88     - add S/R to compute velocity stream-function (called after velocity-potential
89       calculation) from divergence free transport -> new diagnostics "PsiVEL".
90     - add parameter to select grid-point location where PsiVEL == 0.
91    o eesupp/src:
92       new S/R to calculate cumulated sum on tiled array, corner grid-cell location
93       (specific S/R needed with exch2 topology - for now, just print an error msg)
94  o pkg/shelfice  o pkg/shelfice
95   - Implement friction velocity-dependent transfer coefficients following   - Implement friction velocity-dependent transfer coefficients following
96     Holland and Jenkins, JPO, 1999     Holland and Jenkins, JPO, 1999
# Line 27  o pkg/seaice/seaice_growth.F: Line 114  o pkg/seaice/seaice_growth.F:
114      when SEAICE_ADD_SUBLIMATION_TO_FWBUDGET is used in conjunction with the      when SEAICE_ADD_SUBLIMATION_TO_FWBUDGET is used in conjunction with the
115      non-legacy seaice_solve4temp.      non-legacy seaice_solve4temp.
116    - add diagnostic of the residual sublimation freshwater flux (the freshwater    - add diagnostic of the residual sublimation freshwater flux (the freshwater
117      flux taken from the ocean if the total actual latent heat fluxes exceed      flux taken from the ocean if the total actual latent heat fluxes exceed
118      the maximum)      the maximum)
119    - remove the CPP switch around the *_FWbySublim unit change and move diagnostic    - remove the CPP switch around the *_FWbySublim unit change and move diagnostic
120     fill for SIatmQnt, SIfwSubl, SIatmFW to the end of seaice_growth.F.     fill for SIatmQnt, SIfwSubl, SIatmFW to the end of seaice_growth.F.
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