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revision 1.1404 by jmc, Tue Mar 29 20:11:39 2011 UTC revision 1.1418 by jmc, Thu Apr 28 23:26:39 2011 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o pkg/obcs:
8      - remove calls to OBCS_COPY_TRACER after EXCH for T,S & pTracer:
9        no longer needed with maskInC,W,S in pkg/generic_advdiff.
10    o pkg/seaice:
11      - retired SEAICE_SALINITY and SEAICE_salinity in favor of
12        SEAICE_VARIABLE_SALINITY and SIsalFRAC, respectively.
13      - fixed bug in the initialization of sea ice salinity variable HSALT
14        in seaice_init_varia.F  (removed dependence on ICE2WATR)
15    o fizhi-cs test exp.:
16       switch reference output convention for these 2 non-standard test-exp,
17        from: pgi  6.1-5 on faulks (FC.6, -of linux_ia32_pgf77+authors_fc5)
18          to: ifort 11.1 on baudelaire (FC.13, -of linux_amd64_ifort11)
19       reason: faulks might get retired soon and pkg/fizhi has still Pb with gfortran
20    o model/inc:
21      - change type of PmEpR array (from _RS to _RL) to fix restart (with "-use_r4")
22        of exp. global_ocean.90x40x15 (Suncronous time-stepping + Real-FW + NonLin-FS)
23    o pkg/seaice:
24      - fix calculation of saltFlux and saltPlumeFlux when using SEAICE_SALINITY
25    o verification/lab_sea, 1D_ocean_ice_column, seaice_obcs, global_ocean.cs32x15
26      - updated output*.txt files due to bug fixes in salt, saltPlumeFlux,
27        and initial HSALT
28    
29    checkpoint62w (2011/04/26)
30    o pkg/mom_fluxform:
31      - fix calculation of del2u & del2v (no-slip BC) when using Non-Lin Free-Surf.
32      - use parameter "sideDragFactor" in no-slip BC side-drag part.
33      - update output of exp. global_ocean.90x40x15
34    o pkg/mom_vecinv:
35      mask del2u & del2v (no effect on results, but cleaner & closer to mom_fluxform)
36    o update seaice exp.:
37      use more consistent parameter values (remove "backward compatability only":
38       ICE2WATR, SEAICE_lhSublim, SEAICE_cpAir, SEAICE_rhoAir + set rhoConstFresh)
39      related to thermodynamics seaice. Update output (fwd+AD) of exp.:
40       1D_ocean_ice_column (x2), lab_sea (x8), ioffline_exf_seaice (x2) & seaice_obcs
41    o update test-exp global_ocean.90x40x15:
42      o use default CD_CODE_OPTIONS file (Adams-Bashforth on CD Mom & Coriolis).
43      o increase Overlap size from 2 to 3 (to allow to test bi-harmonic Visc.)
44      o new pickup-files from a 100.yr run with pkg/down_slope (input.dwnslp params)
45      o turn on zStar & viscA4 in standard set-up (dir input/)
46        and update output files: output.txt & output.dwnslp.txt
47    o new AD-test experiment: obcs_ctrl
48      (From Matt MITgcm_Contrib/SOSE/BoxAdj) to test OBCS as control vector.
49    o pkg/dic:
50      fix two bugs in handling water vapour pressure in carbonate chemistry
51      and air-sea fluxes. Found by Val Bennington and Galen McKinley
52      (add DIC Option = WATERVAP_BUG to recover old results)
53      update output of tutorial_global_oce_biogeo (fwd+AD) & tutorial_dic_adjoffline
54    o adding allowInteriorFreezing option to check for water below freezing point
55      at depth and bring the negative heat anomaly to the surface level
56    o pkgs _fields_load:
57      - extend GET_PERIODIC_INTERVAL to deal with non-periodic case (from pkg/rbcs)
58      - use new S/R GET_PERIODIC_INTERVAL in pkgs:
59        bulk_force, cheapaml, cfc, dic, obcs (+ ctrl/ctrl_get_gen_rec), offline and
60        rbcs to get interpolation weights and time reccord number.
61      - fix multi-threading in aim_fields_load.F
62      - apply EXCH to temp arrays [0,1] after reading in dic_fields_load.F
63    o external_fields_load:
64      new S/R GET_PERIODIC_INTERVAL to calculate which time-record (and linear
65       interpolation weights) to use in a periodic time-series ; do not divide by
66       time-step to convert to integer:
67       - this fixes case where externForcingPeriod is not multiple of time-step
68          (Thanks to Christopher L. Wolfe)
69       - this fixes case where externForcingPeriod is an odd multiple of time-step
70         (was wrong by half of time-step); update results of tutorial_global_oce_in_p.
71      store index of time-record which is currently loaded:
72       - works without any assumption on sequence of calls to EXTERNAL_FIELDS_LOAD ;
73       - needed for the adjoint but not yet used because of extensive recomputations;
74         (to be fixed soon)
75    
76    checkpoint62v (2011/04/02)
77    o verification/1D_ocean_ice_column added to test Ian Fenty's
78      pkg/seaice_growth.F modifications for improving sea ice code differentiability
79    o update output of exp4, internal_wave, seaice_obcs, tutorial_plume_on_slope
80      (new velocity statistics after changing maskInW & maskInS definition)
81  o pkg/generic_advdiff with OBCS:  o pkg/generic_advdiff with OBCS:
82    use maksInW & maskInS in advective flux and in biharmonic diffusion calculation:    use maksInW & maskInS in advective flux and in biharmonic diffusion calculation:
83    equivalent to assumption of no tracer gradient outside the OB region.    equivalent to assumption of no tracer gradient outside the OB region.

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