4 |
Notes on tags used in MITgcmUV |
Notes on tags used in MITgcmUV |
5 |
============================== |
============================== |
6 |
|
|
7 |
|
checkpoint62q (2010/12/29) |
8 |
|
o model/src: |
9 |
|
- check horizontal grid-spacing for unset or zero/negative values. |
10 |
|
- change AD test hs94.1x64x5 to be truly a 2-D set-up. |
11 |
|
o pkg/flt: |
12 |
|
- use (recent) mdsio S/R MDS_READVEC_LOC instead of local FLT_MDSREADVECTOR |
13 |
|
- precision of input and output files set according to readBinaryPrec |
14 |
|
and writeBinaryPrec (previously always 64.b), pickup remains at 64 bits. |
15 |
|
- initial float position from tiled file was not converted to index space |
16 |
|
(looks like a bug): fixed to make it similar to initial pos. global file. |
17 |
|
o global_ocean.cs32x15: |
18 |
|
change SIZE.h of AD set-up to get same tiling as with MPI. |
19 |
|
Update output_adm, output_adm.thsice (pass@14) & output_adm.seaice (fail@11) |
20 |
|
o model/src: |
21 |
|
add flag to control printing of domain fields (bathymetry, hFac ...) in |
22 |
|
ini_mask_etc (call to plot_fieds_xy*). |
23 |
|
o pkg/thsice: |
24 |
|
if useEXF, some forcing fields are not valid in overlap: fixed by computing |
25 |
|
over the interior only + apply EXCH at the end (like with SEAICE advection). |
26 |
|
o pkg/mdsio: |
27 |
|
- add 2 arguments to S/R MDS_PASS_R4/8toRL/S for overlap size of buffer |
28 |
|
to copy to/from, so that it can be used to replace MDS_PASS_WH_R8toRL/RS. |
29 |
|
- change barrier call for safe multi-threads access to 3-D shared buffer. |
30 |
|
- MDS_READ/WRITEVEC_LOC use buffers from MDSIO_BUFF_3D.h (instead of local ones) |
31 |
|
- replace call to MDS_PASS_WH_R4/8toRL with call to MDS_PASS_R4/8toRL and |
32 |
|
remove the 4 S/R MDS_PASS_WH_R4/8toRL/S. |
33 |
|
o pkg/flt: |
34 |
|
- add fourth-order Runge-Kutta integration |
35 |
|
- add basic exch2 support (only 1 facet supported so far!) |
36 |
|
o pkg/mdsio+rw: |
37 |
|
new S/R to read local (or tile independent) vector (read counterpart of |
38 |
|
mds_writevec_loc, and front-end write_glvec_rl/rs). |
39 |
|
o global_ocean.cs32x15: additional input_ad.seaice experiment |
40 |
|
that uses pkg/seaice rather than pkg/thsice. |
41 |
|
(using multidim advection for seaice) |
42 |
|
o towards more F95 syntax for array specification in namelist: |
43 |
|
- change "data.diagnostics" (data.ptracers was changed before checkpoint62p) |
44 |
|
of all verification experiments. |
45 |
|
e.g.: line: fields(1,3)='ETAN ','ETANSQ ', |
46 |
|
was changed to: fields(1:2,3)='ETAN ','ETANSQ ', |
47 |
|
- finish adding "-DNML_EXTENDED_F77" to DEFINES list in pgf77 and g77 optfiles |
48 |
|
o global_ocean.cs32x15: additional input.seaice experiment |
49 |
|
that uses pkg/seaice rather than pkg/thsice. |
50 |
|
|
51 |
|
checkpoint62p (2010/12/17) |
52 |
|
o pkg/thsice: rename (ad tape index) iicekey as ticekey, and move it |
53 |
|
to THSICE_SIZE.h to avoid conflict with pkg/seaice. |
54 |
|
o pkg/seaice: add seaice_diffusion.f seaice_map_thsice.f to adjoint. |
55 |
|
allow for use of multim. advection in seaice adjoint. |
56 |
|
o pkg/seaice: add diagnostics for snow precipitation and sublimation flux |
57 |
|
- first attempt to close budgets by taking into account the freshwater |
58 |
|
flux implied by the sublimation of snow and ice. So far only the |
59 |
|
volume budget is closed, turn on with soon-to-be-retired-again CPP-Flag |
60 |
|
SEAICE_ADD_SUBLIMATION_TO_FWBUDGET |
61 |
|
o eesupp/src: |
62 |
|
new S/R with new option (NML_EXTENDED_F77) to change array specification |
63 |
|
from F95 standard to commonly accepted extended F77 form. |
64 |
|
This would allow to use F95 syntax in namelist (needed with gfortran 4.4.5) |
65 |
|
and to revert back to the original syntax (with -DNML_EXTENDED_F77) |
66 |
|
for less tolerant f77 compiler (e.g., pgf77, g77). |
67 |
|
o globalFiles: |
68 |
|
commented out in parameter file "data" since it's not safe with MPI |
69 |
|
(e.g., wrong on aces); keep it if useSingleCpuIO=T (but not doing much |
70 |
|
in this case); no longer commented out in restart test (tst_2+2). |
71 |
|
o add adTapeDir to specify a special directory where adjoint tapes are |
72 |
|
written/read (adread_adwrite.F). adTapeDir is specified in data/PARM05 |
73 |
|
and cannot be used together with mdsioLocalDir. |
74 |
|
o nesting pkgs: |
75 |
|
- packages_init_variables : put call to OBCS_INIT_VARIABLES in last position |
76 |
|
- update Gianmaria's Nesting pkgs (from Contrib/nesting_sannino) |
77 |
|
- add parameter files + utils dir + output from short run on beagle. |
78 |
|
o pkg/seaice: |
79 |
|
fix seaice_growth.F store directives; update results of exp. lab_sea.ad |
80 |
|
o pkg/seaice: explicitly store tsurfloc in seaice_solve4temp.F to avoid |
81 |
|
unnecessary copying in adjoint code, requires new parameter NMAX_ITER |
82 |
|
|
83 |
|
checkpoint62o (2010/11/25) |
84 |
|
o pkg/exf: |
85 |
|
- change CPP option EXF_VERBOSE to run-time logical param exf_verbose. |
86 |
|
o pkg/seaice: |
87 |
|
- seaice_ocean_stress: split a loop for better vectorization of the |
88 |
|
adjoint code |
89 |
|
- seaice_growth.F: fix bug in conservation of freshwater connected to |
90 |
|
capping of heff, put contribution into d_HEFFbyNEG |
91 |
|
- replace irritating parameters SEAICE_latentWater/Ice and SEAICE_sensHeat |
92 |
|
by something more sensible (parameters that are what their name implies) |
93 |
|
- change some defaults, so that by default exf-parameters are used for |
94 |
|
things like rhoAir, cpAir,latent/sensible heat parameters, in order |
95 |
|
to reproduce the old results, many data.seaice now contain funny values |
96 |
|
for cpAir and latent heat of sublimation |
97 |
|
o packages_readparms.F: move exf_readparms up in line so that |
98 |
|
exf-parameters are visible for other packages (e.g. seaice) |
99 |
|
o debugMode & debugLevel=2: |
100 |
|
- differentiate between debugMode & debugLevel=2: |
101 |
|
debugMode: controls printing of debug messages (sequence of S/R calls). |
102 |
|
debugLevel: controls printing of algorithm intermediate results and stats. |
103 |
|
- remove "if debugLevel=2 => debugMode" but keep "debugMode => debugLevel=2"; |
104 |
|
=> allows to print debug-stats without all sequence of call messages. |
105 |
|
- switch control of debug print from debugLevel to debugMode in many S/R. |
106 |
|
o pkg/obcs (obcs-sponge): |
107 |
|
fix bug that was introduced on Oct 25 (in dynamics.F v1.151): put back the |
108 |
|
call to OBCS_PRESCRIBE_EXCHANGES (need to exch gU,gV when using obcs-sponge) |
109 |
|
o pkg/generic_advdiff: |
110 |
|
- record overlap minimum size for each advection scheme; |
111 |
|
- refine criteria on overlap minimum size; |
112 |
|
- check and stop (in gad_check) if overlap size is too small. |
113 |
|
o pkg/obcs: |
114 |
|
- with ptracers: remove multiple calls to obcs_apply_ptracer (only done |
115 |
|
once, in ptracers_implicit.F) |
116 |
|
- with seaice: remove test on empty file name in obcs_apply_seaice (always |
117 |
|
apply OB values when tile has OB) |
118 |
|
o model/src, coriolis setting: |
119 |
|
- integer parameter "selectCoriMap" (=0,1,2) replaces 3 logical |
120 |
|
useConstantF, useBetaPlaneF, useSphereF ; can now read coriolis from |
121 |
|
files (selectCoriMap=3) with any grid. |
122 |
|
- add parameter "fPrime" for constant second Coriolis coeff (default=0). |
123 |
|
o pkg/seaice/seaice_growth.F: |
124 |
|
a few cosmetic changes that reduce the number of lines of code |
125 |
o pkg/obcs: add boundary conditions following Stevens (1990) |
o pkg/obcs: add boundary conditions following Stevens (1990) |
126 |
- the code follows old MOM/NAOSIM code |
- the code follows old MOM/NAOSIM code |
127 |
- so far it is only implemented for the eastern and western boundaries |
- so far it is only implemented for the eastern and western boundaries |