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revision 1.1228 by gforget, Tue Feb 16 23:39:26 2010 UTC revision 1.1248 by jmc, Mon Apr 12 20:29:44 2010 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o build_options:
8     - rename "linux_ia64_ifort+mpi_ice_nas" to "linux_amd64_ifort+mpi_ice_nas"
9    o pkg/dic:
10      change DIC atmos-CO2 box (method 3, dic_int1=3) initialisation & restart:
11      - use binary pickup file for restart;
12      - initialise atmos-CO2 box from dic_pCO2 parameter;
13      - fix multi-threaded.
14    o pkg/rbcs:
15     - clean-up RBCS code: add RBCS_OPTIONS.h file ; fix multi-threaded ;
16       change (+ fix IO calls) type of array RBC_mask from _RL to _RS.
17     - add RBCS to exp4 passive tracer 01 (rbcs was previously untested)
18       and update output.txt
19    o pkg/kpp:
20     - add diagnostics for KPP non-local flux of Temp, Salinity and pTracers;
21     - change diagnostic of KPP non-local term: output average of KPPghat*KPPdiffKzS
22       (= ratio of KPP non-local (salt) flux relative to surface-flux) when
23       using pkg/timeave & pkg/diagnostics (diag 'KPPghatK' replaces 'KPPghat ');
24     - change pkg/offline to read-in average KPPghat*KPPdiffKzS from file
25       KPP_ghatKFile (instead of the average of KPPghat from file KPP_ghatFile).
26    o pkg/offline:
27      fix bug in S/R OFFLINE_FIELDS_LOAD regarding surfaceForcing conversion factor
28      (bug was added in version 1.10 on 2007-08-23).
29    o pkg/offline:
30      - no need to specify periodicExternalForcing, etc ... to use offline pack
31      - offline input files no longer just single prec --> parameter offlineLoadPrec
32    o verification/lab_sea:
33      change AD test to multi-tile setup and update all 4 AD output.
34      NOTE: while cost function values remain very similar,
35      gradients are very different, although gradient checks are self-consistent
36      Should try to get to the bottom of this (cost function summation order?)
37    o pkg/dic:
38      in carbon_chem.F, replace log10 (AUTODIFF) with explicit form to avoid
39      a weakness of TAF that drops part of double precision in log10 derivative.
40      <= changes removed since problem has been fixed in current TAF version 1.9.71
41      update AD output of exp. tutorial_dic_adjoffline & tutorial_global_oce_biogeo.
42    o pkg/ecco:
43      add missing "_d 0" in cost_readers.F, cost_readtopex.F & cost_readtopexmean.F
44      update all 4 lab_sea AD output.
45    
46    checkpoint62d (2010/03/22)
47    o build_options:
48      remove '-r8' (and '-i4') from linux_*pgf and linux_*ifort optfiles.
49    o remove unbalanced quote (single or double) in commented line of source code
50      (may cause some warning with some preprocessor/makedepend versions).
51    o pkg/seaice:
52      fix seaice_model.F for adjoint (gael) and update AD results of experiments
53       lab_sea (std + evp + noseaicedyn) and offline_exf_seaice.
54    o testreport:
55      add option '-runonly' (short: '-ro') to just do the run part (without make).
56    o eesupp: remove JAM communication code (obsolete).
57    o add option to genmake2 & testreport to switch "_RS" type to "real*4"
58      (if allowed in CPP_EEOPTIONS.h); update default CPP_EEOPTIONS.h and return
59      to default CPP_EEOPTIONS.h for exp. inverted_barometer & solid-body.cs-32x32x1
60      (update also the output).
61    
62    checkpoint62c (2010/03/02)
63    o tools/build_options :
64       move (some) old optfiles from build_options/ to build_options/unsupported/
65    o model/src and pkg/exf
66       surface relaxation -- separating data and data.exf options
67       The point is to ensure that we specify the surface relaxation
68       either in data or in data.exf (but not half and half) and to
69       avoid an accidental relaxation to 0 (which happened if a time
70       scale was specified but the file name was left empty)
71    o model/src model/inc and pkg/mom_common
72       ALLOW_3D_VISCAH/ALLOW_3D_VISCA4 => 3D specification of Viscosity
73       => addition to the viscosity field as computed by others schemes
74    o tools/build_options:
75      - rename "_generic_mpi" -> "+mpi_generic" (like other "+mpi" optfile)
76        but keep the former optfile for few weeks for smooth transition
77  o pkg/ecco  o pkg/ecco
78    - allow user defined cost function contributions    - allow user defined cost function contributions
79          CPP: ALLOW_USERCOST_CONTRIBUTION          CPP: ALLOW_USERCOST_CONTRIBUTION
# Line 12  o pkg/ecco Line 82  o pkg/ecco
82        the two options are complementary.        the two options are complementary.
83  o pkg/smooth  o pkg/smooth
84    - migration from contrib to the main repository    - migration from contrib to the main repository
85    
86  checkpoint62b (2010/01/26)  checkpoint62b (2010/01/26)
87  o pkg/monitor:  o pkg/monitor:
88    - change back mon_printstats_rl.F & mon_stats_rl.F and add a stop    - change back mon_printstats_rl.F & mon_stats_rl.F and add a stop
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