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revision 1.1212 by jmc, Sun Jan 3 21:12:48 2010 UTC revision 1.1238 by jmc, Tue Mar 16 00:32:32 2010 UTC
# Line 4  $Name$ Line 4  $Name$
4      Notes on tags used in MITgcmUV      Notes on tags used in MITgcmUV
5      ==============================      ==============================
6    
7    o remove unbalanced quote (single or double) in commented line of source code
8      (may cause some warning with some preprocessor/makedepend versions).
9    o pkg/seaice:
10      fix seaice_model.F for adjoint (gael) and update AD results of experiments
11       lab_sea (std + evp + noseaicedyn) and offline_exf_seaice.
12    o testreport:
13      add option '-runonly' (short: '-ro') to just do the run part (without make).
14    o eesupp: remove JAM communication code (obsolete).
15    o add option to genmake2 & testreport to switch "_RS" type to "real*4"
16      (if allowed in CPP_EEOPTIONS.h); update default CPP_EEOPTIONS.h and return
17      to default CPP_EEOPTIONS.h for exp. inverted_barometer & solid-body.cs-32x32x1
18      (update also the output).
19    
20    checkpoint62c (2010/03/02)
21    o tools/build_options :
22       move (some) old optfiles from build_options/ to build_options/unsupported/
23    o model/src and pkg/exf
24       surface relaxation -- separating data and data.exf options
25       The point is to ensure that we specify the surface relaxation
26       either in data or in data.exf (but not half and half) and to
27       avoid an accidental relaxation to 0 (which happened if a time
28       scale was specified but the file name was left empty)
29    o model/src model/inc and pkg/mom_common
30       ALLOW_3D_VISCAH/ALLOW_3D_VISCA4 => 3D specification of Viscosity
31       => addition to the viscosity field as computed by others schemes
32    o tools/build_options:
33      - rename "_generic_mpi" -> "+mpi_generic" (like other "+mpi" optfile)
34        but keep the former optfile for few weeks for smooth transition
35    o pkg/ecco
36      - allow user defined cost function contributions
37            CPP: ALLOW_USERCOST_CONTRIBUTION
38            USAGE: compute contributions in cost_usercost_all.F
39      - note: this is identical to what ALLOW_GENCOST_CONTRIBUTION once was.
40          the two options are complementary.
41    o pkg/smooth
42      - migration from contrib to the main repository
43    
44    checkpoint62b (2010/01/26)
45    o pkg/monitor:
46      - change back mon_printstats_rl.F & mon_stats_rl.F and add a stop
47        (in case someone forgot to update customized pieces of code)
48    o nonHydrostatic:
49      - add Non-hydrostatic free-surface form (selectNHfreeSurf=1)(not fully tested);
50      - add a simple 2-D experiment (short_surf_wave) to test it.
51    o pkg/icefront:
52       adding the shell of, and the hooks to, a new package that
53       will model melting and freezing of vertical glacier ice fronts
54    o momentum:
55      add diagnostics of momentum tendency from Hydrostatic pressure gradient
56       (without surf.pressure term: would need a 2nd filling since implicit term).
57    o add 3 "_d 0"s so that fizhi compiles with xlf on iblade, and replace
58      two " &end" by " &" (in fizhi-cs-*) because S/R NML_SET_TERMINATOR
59      cannot deal with the former
60    o cleaning:
61      - remove all (except OpenAD) old TLM output from results_ad dirs.
62      - remove unused S/R (MDSWRITEMETA, DIAGNOSTICS_ADD2LIST, old DFILE IO S/R)
63      - comment out maskH definition (replaced by maskInC)
64    o pkg/monitor:
65      - change mon_printstats_rl.F & mon_stats_rl.F (were similar to mon_writestats_rl
66        & mon_calc_stats_rl) to be the RL equivalent of mon_printstats_rs & mon_stats_rs.
67    
68    checkpoint62a (2010/01/15)
69    o model/src:
70      - bottom pressure diagnostic: correct for r* (when nonlinFreeSurf >= 4)
71    o pkg/diagnostics:
72      - add optional level number diagnostics (i.e., level number to be define
73        explictly with S/R DIAGNOSTICS_SETKLEV) with parser-code(10)="X".
74      - strictly check for valid parser-code(10) ;
75      - check if adding diag to the list from the right place.
76    o pkg/longstep:
77      - change parameters and fix tracer conservation with rstar/nonlinear free surface
78    o diagnostics:
79     - in all pkgs, replace remaining calls to old S/R DIAGNOSTICS_ADD2LIST with newer
80       S/R DIAGNOSTICS_ADDTOLIST ; fix seaice VICE diagnostics.
81    o pkg/diagnostics:
82     - Add option for writing vertical integral (sum of selected levels) of an output
83        field instead of writing output field levels. Activate this option on a per
84        output-file basis, by setting the 2nd character of fileflag to 'I'.
85     - Add field-specific information relative to level integral in 3rd postion
86        of parser diagnostics code (gdiag): " "=cumulate levels, "R"=integrate
87        vertically (x level-thickness x hFac), "r"=same but without hFac.
88    o do_the_model_io:
89      - pass end-of-model-run flag as argument, from forward_step to diagnostics_write:
90        in case useSIGREG, will write (averaged) diagnostics (if dumpAtLast) before
91        writing pickups and stopping.
92    o pkg/diagnostics (for now, only with mdsio):
93      - write time information to meta file (and modify accordingly rdmds.m) :
94        time-averaged diagnostics output: write starting and ending time of the
95        time-averaging interval ; snap-shot diagnostics output remains unchanged;
96  o pkg/timeave:  o pkg/timeave:
97    - S/R TIMEAVE_NORMALIZ: change size of cumulated-time array (was previously    - S/R TIMEAVE_NORMALIZ: change size of cumulated-time array (was previously
98      always Nr), now assumed to be equal to number of levels of averaged field;      always Nr), now assumed to be equal to number of levels of averaged field;

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